RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PGBD3Q8N328 593 aa4.45□□□□□ -1.7
NEDD4-209ENST00000508871 NKD1Q969G9 470 aa4.45□□□□□ -1.7
NEDD4-209ENST00000508871 CABP1Q9NZU7 370 aa4.45□□□□□ -1.7
NEDD4-209ENST00000508871 NDOR1Q9UHB4 597 aa4.45□□□□□ -1.7
NEDD4-209ENST00000508871 FBXL5Q9UKA1 691 aa4.45□□□□□ -1.7
NEDD4-209ENST00000508871 SOS1Q07889 1333 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-209ENST00000508871 PRR36Q9H6K5 1346 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 BACH1O14867 736 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 PDPK1O15530 556 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 PHACTR2O75167 634 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 FBXO24O75426 580 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 TNFAIP3P21580 790 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 DSG3P32926 999 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 CHKAP35790 457 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 USP8P40818 1118 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 EIF1AXP47813 144 aaKnown RBP4.44□□□□□ -1.7
NEDD4-209ENST00000508871 KCNJ6P48051 423 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 ANKRD1Q15327 319 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 TAF11Q15544 211 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 TAF1CQ15572 869 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-209ENST00000508871 NBPF9Q3BBW0 867 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 ARMC5Q96C12 935 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 CCDC43Q96MW1 224 aaKnown RBP4.44□□□□□ -1.7
NEDD4-209ENST00000508871 PDE8AO60658 829 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 USP17L7P0C7H9 530 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 RRP1P56182 461 aaKnown RBP4.44□□□□□ -1.7
NEDD4-209ENST00000508871 CACNB1Q02641 598 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-209ENST00000508871 RSPH1Q8WYR4 309 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 MFSD3Q96ES6 412 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 NEK1Q96PY6 1258 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 FAM167BQ9BTA0 163 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 ZFATQ9P243 1243 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 MAPK8IP1Q9UQF2 711 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 SCN11AQ9UI33 1791 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 A0A1W2PRQ8 180 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 REC8O95072 547 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 ATF4P18848 351 aaPredicted RBP4.44□□□□□ -1.7
NEDD4-209ENST00000508871 AGAP9Q5VTM2 703 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 GBP6Q6ZN66 633 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 DZIP1LQ8IYY4 767 aaKnown RBP4.44□□□□□ -1.7
NEDD4-209ENST00000508871 MNS1Q8NEH6 495 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 BARD1Q99728 777 aaKnown RBP4.44□□□□□ -1.7
NEDD4-209ENST00000508871 HERPUD2Q9BSE4 406 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 FLT4P35916 1363 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 COL14A1Q05707 1796 aaKnown RBP4.44□□□□□ -1.7
NEDD4-209ENST00000508871 CCDC163A0A0D9SF12 145 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 PF4V1P10720 104 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 KRT13P13646 458 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 WASHC5Q12768 1159 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 ZSWIM2Q8NEG5 633 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 SYMPKQ92797 1274 aaKnown RBP4.44□□□□□ -1.7
NEDD4-209ENST00000508871 RGPD2P0DJD1 1756 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 PXDNQ92626 1479 aa4.44□□□□□ -1.7
NEDD4-209ENST00000508871 FANCCQ00597 558 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 MAPRE1Q15691 268 aaKnown RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 Q3C1V9 767 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 BRDTQ58F21 947 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 GJC2Q5T442 439 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 PPP2R2DQ66LE6 453 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 CMTR1Q8N1G2 835 aaKnown RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 CLASRPQ8N2M8 674 aaKnown RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 EPS8L1Q8TE68 723 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 AFAP1L1Q8TED9 768 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 JPH3Q8WXH2 748 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 FAM204AQ9H8W3 233 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 PDZRN3Q9UPQ7 1066 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 EMILIN1Q9Y6C2 1016 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 CICQ96RK0 1608 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 IQCA1LA6NCM1 817 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 IFRD1O00458 451 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 EEF2P13639 858 aaKnown RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 SLC5A1P13866 664 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 YARSP54577 528 aaKnown RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 IFIT5Q13325 482 aaKnown RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 MEI1Q5TIA1 1274 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 LRSAM1Q6UWE0 723 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 CLEC4GQ6UXB4 293 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 TINF2Q9BSI4 451 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 TSPYL1Q9H0U9 437 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 ARNT2Q9HBZ2 717 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 PLCB1Q9NQ66 1216 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 CWC25Q9NXE8 425 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 UBAP1Q9NZ09 502 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 EGFL7Q9UHF1 273 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 ACEP12821 1306 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 KRT37O76014 449 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 RAG1P15918 1043 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 SAFBQ15424 915 aaKnown RBP eCLIP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 MAP7D1Q3KQU3 841 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 ANO6Q4KMQ2 910 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 C1orf167Q5SNV9 1468 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 DNAJB7Q7Z6W7 309 aaPredicted RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 HOOK3Q86VS8 718 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 CALML4Q96GE6 196 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 RGPD5Q99666 1765 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 ELAC2Q9BQ52 826 aaKnown RBP4.43□□□□□ -1.7
NEDD4-209ENST00000508871 MYLK2Q9H1R3 596 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 CNNM1Q9NRU3 951 aa4.43□□□□□ -1.7
NEDD4-209ENST00000508871 CREBZFQ9NS37 354 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms