RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 CEP290O15078 2479 aa12.11□□□□□ -0.47
UBE2D3-227ENST00000508818 NAV1Q8NEY1 1877 aa12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 CYP2D7A0A087X1C5 515 aa12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 ERC2O15083 957 aa12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 RNF113AO15541 343 aaKnown RBP12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 RAD21O60216 631 aa12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 EVI5O60447 810 aa12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 APPP05067 770 aa12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 ZFYP08048 801 aaPredicted RBP12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 AKR1B1P15121 316 aa12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 ICA1Q05084 483 aa12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 NECAB2Q7Z6G3 386 aa12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 KBTBD3Q8NAB2 608 aa12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 TRIB2Q92519 343 aa12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 PUS7LQ9H0K6 701 aaKnown RBP12.1□□□□□ -0.47
UBE2D3-227ENST00000508818 A0A1W2PRG0 241 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 SLC15A5A6NIM6 579 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 MINDY4BA8MYZ0 360 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 CHGBP05060 677 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 TRIM32Q13049 653 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 MAP2K5Q13163 448 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 MORN1Q5T089 497 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 MFSD14CQ5VZR4 134 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 TSHZ3Q63HK5 1081 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 CTR9Q6PD62 1173 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 LBX2Q6XYB7 198 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 UBE2Q1Q7Z7E8 422 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 ANKLE1Q8NAG6 615 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 LPAR1Q92633 364 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 PAWRQ96IZ0 340 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 STRBPQ96SI9 672 aaKnown RBP12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 APBA2Q99767 749 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 KANSL2Q9H9L4 492 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 MKNK2Q9HBH9 465 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 ARPP21Q9UBL0 812 aaPredicted RBP12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 COLQQ9Y215 455 aaPredicted RBP12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 CENPFP49454 3210 aa12.09□□□□□ -0.47
UBE2D3-227ENST00000508818 SPDYE16A6NNV3 312 aaPredicted RBP12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 CNMDO75829 334 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 FLOT1O75955 427 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 GNAT2P19087 354 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 PTPREP23469 700 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 PLS1Q14651 629 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 POTEEQ6S8J3 1075 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 C16orf86Q6ZW13 317 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 DPP9Q86TI2 863 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 SPICE1Q8N0Z3 855 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 STK11IPQ8N1F8 1099 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 APPBP2Q92624 585 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 NBPF3Q9H094 633 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 ZNF287Q9HBT7 754 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 BTBD7Q9P203 1132 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 TMX2Q9Y320 296 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 PCDHB15Q9Y5E8 787 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 TTC41PQ6P2S7 1318 aa12.08□□□□□ -0.48
UBE2D3-227ENST00000508818 STRNO43815 780 aa12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 EEF2P13639 858 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 TDO2P48775 406 aa12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 RRP1P56182 461 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 CACNB2Q08289 660 aaPredicted RBP12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 CCL14Q16627 93 aa12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 GIMAP6Q6P9H5 292 aa12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 CLEC10AQ8IUN9 316 aa12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 MB21D1Q8N884 522 aa12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 USP6NLQ92738 828 aa12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 YTHDC1Q96MU7 727 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 FSD1Q9BTV5 496 aa12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 NACAP1Q9BZK3 213 aa12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 VCPKMTQ9H867 229 aa12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 GOPCQ9HD26 462 aa12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 SLC5A4Q9NY91 659 aa12.07□□□□□ -0.48
UBE2D3-227ENST00000508818 GSG1L2A8MUP6 293 aa12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 WDR46O15213 610 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 GPAA1O43292 621 aa12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 CNGA1P29973 690 aa12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 SBK1Q52WX2 424 aa12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 MAP3K21Q5TCX8 1036 aa12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 ANKRD45Q5TZF3 282 aa12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 NCAPG2Q86XI2 1143 aa12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 SIAH1Q8IUQ4 282 aa12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 ZNF444Q8N0Y2 327 aaPredicted RBP12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 OSBP2Q969R2 916 aa12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 MOV10L1Q9BXT6 1211 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 SPATC1LQ9H0A9 340 aa12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 C11orf49Q9H6J7 331 aa12.06□□□□□ -0.48
UBE2D3-227ENST00000508818 PATL2C9JE40 543 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-227ENST00000508818 SMIM22K7EJ46 135 aa12.05□□□□□ -0.48
UBE2D3-227ENST00000508818 SLC3A2P08195 630 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-227ENST00000508818 ERCC3P19447 782 aa12.05□□□□□ -0.48
UBE2D3-227ENST00000508818 MX1P20591 662 aa12.05□□□□□ -0.48
UBE2D3-227ENST00000508818 CCND3P30281 292 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-227ENST00000508818 SHCBP1Q8NEM2 672 aa12.05□□□□□ -0.48
UBE2D3-227ENST00000508818 DIS3LQ8TF46 1054 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-227ENST00000508818 CRBNQ96SW2 442 aa12.05□□□□□ -0.48
UBE2D3-227ENST00000508818 MROH8Q9H579 483 aa12.05□□□□□ -0.48
UBE2D3-227ENST00000508818 PCDH10Q9P2E7 1040 aa12.05□□□□□ -0.48
UBE2D3-227ENST00000508818 OGDHLQ9ULD0 1010 aa12.05□□□□□ -0.48
UBE2D3-227ENST00000508818 BAZ2AQ9UIF9 1905 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-227ENST00000508818 DDX60LQ5H9U9 1706 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms