RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 IL17RBQ9NRM6 502 aa12.04□□□□□ -0.48
HTT-204ENST00000508321 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.04□□□□□ -0.48
HTT-204ENST00000508321 CYP46A1Q9Y6A2 500 aa12.04□□□□□ -0.48
HTT-204ENST00000508321 WDR33Q9C0J8 1336 aaKnown RBP12.04□□□□□ -0.48
HTT-204ENST00000508321 A0A0G2JMZ2 1700 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 WDR46O15213 610 aaKnown RBP12.03□□□□□ -0.48
HTT-204ENST00000508321 ALDH1A1P00352 501 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 LIFRP42702 1097 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 RCAN1P53805 252 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 WTAPQ15007 396 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 SEC23AQ15436 765 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 ADCK5Q3MIX3 580 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 IFIT1BQ5T764 474 aaKnown RBP12.03□□□□□ -0.48
HTT-204ENST00000508321 RUFY3Q7L099 469 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 CYB5R4Q7L1T6 521 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 CNKSR2Q8WXI2 1034 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 MS4A4AQ96JQ5 239 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 TBC1D32Q96NH3 1257 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 KAT14Q9H8E8 782 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 ZSWIM6Q9HCJ5 1215 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 PNMA3Q9UL41 463 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 AGTPBP1Q9UPW5 1226 aa12.03□□□□□ -0.48
HTT-204ENST00000508321 CCL15-CCL14A0A0B4J2E2 113 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 A0A1W2PRG0 241 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 SH2B2O14492 632 aaPredicted RBP12.02□□□□□ -0.49
HTT-204ENST00000508321 IFIT3O14879 490 aaKnown RBP12.02□□□□□ -0.49
HTT-204ENST00000508321 NMT2O60551 498 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 DDAH1O94760 285 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 RPS6KB1P23443 525 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 VEGFBP49765 207 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 HMGCS2P54868 508 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 ANTXR2P58335 489 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 EXOSC10Q01780 885 aaKnown RBP12.02□□□□□ -0.49
HTT-204ENST00000508321 ATP2B2Q01814 1243 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 CCL15Q16663 113 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 TMEM67Q5HYA8 995 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 RCSD1Q6JBY9 416 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 ANKRD23Q86SG2 305 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 CCDC84Q86UT8 332 aaPredicted RBP12.02□□□□□ -0.49
HTT-204ENST00000508321 SGMS1Q86VZ5 419 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 CLEC10AQ8IUN9 316 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 ACER1Q8TDN7 264 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 DCAF4Q8WV16 495 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 GMCL1Q96IK5 515 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 CLIP2Q9UDT6 1046 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 MYPNQ86TC9 1320 aa12.02□□□□□ -0.49
HTT-204ENST00000508321 HSPA1AP0DMV8 641 aaKnown RBP12.01□□□□□ -0.49
HTT-204ENST00000508321 HSPA1BP0DMV9 641 aaKnown RBP12.01□□□□□ -0.49
HTT-204ENST00000508321 CALM1P0DP23 149 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 CALM2P0DP24 149 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 CALM3P0DP25 149 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 VCAM1P19320 739 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 TM4SF4P48230 202 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 FGD1P98174 961 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 RABEP1Q15276 862 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 ANKRD1Q15327 319 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 SIAH1Q8IUQ4 282 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 LRRC47Q8N1G4 583 aaKnown RBP12.01□□□□□ -0.49
HTT-204ENST00000508321 PNMA1Q8ND90 353 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 GTF3C2Q8WUA4 911 aaPredicted RBP12.01□□□□□ -0.49
HTT-204ENST00000508321 BRI3BPQ8WY22 251 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 PARK7Q99497 189 aaKnown RBP12.01□□□□□ -0.49
HTT-204ENST00000508321 TMEM47Q9BQJ4 181 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 ZKSCAN3Q9BRR0 538 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 AGXT2Q9BYV1 514 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 LY9Q9HBG7 655 aa12.01□□□□□ -0.49
HTT-204ENST00000508321 RLFQ13129 1914 aa12□□□□□ -0.49
HTT-204ENST00000508321 CAPN15O75808 1086 aa12□□□□□ -0.49
HTT-204ENST00000508321 NDUFB10O96000 172 aa12□□□□□ -0.49
HTT-204ENST00000508321 SNHG28P0DPA3 235 aa12□□□□□ -0.49
HTT-204ENST00000508321 HOXA7P31268 230 aaPredicted RBP12□□□□□ -0.49
HTT-204ENST00000508321 KIF23Q02241 960 aaPredicted RBP12□□□□□ -0.49
HTT-204ENST00000508321 MKRN3Q13064 507 aaKnown RBP12□□□□□ -0.49
HTT-204ENST00000508321 GRM1Q13255 1194 aa12□□□□□ -0.49
HTT-204ENST00000508321 MOGSQ13724 837 aa12□□□□□ -0.49
HTT-204ENST00000508321 GPATCH4Q5T3I0 446 aaKnown RBP12□□□□□ -0.49
HTT-204ENST00000508321 GADL1Q6ZQY3 521 aa12□□□□□ -0.49
HTT-204ENST00000508321 CATIPQ7Z7H3 387 aa12□□□□□ -0.49
HTT-204ENST00000508321 IGDCC4Q8TDY8 1250 aa12□□□□□ -0.49
HTT-204ENST00000508321 MAP3K14Q99558 947 aa12□□□□□ -0.49
HTT-204ENST00000508321 ALDH8A1Q9H2A2 487 aaPredicted RBP12□□□□□ -0.49
HTT-204ENST00000508321 NID2Q14112 1375 aa12□□□□□ -0.49
HTT-204ENST00000508321 CCDC69A6NI79 296 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 USP17L15C9J2P7 530 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 USP17L13C9JLJ4 530 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 USP17L11C9JVI0 530 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 USP17L18D6R9N7 530 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 USP17L22D6RA61 530 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 USP17L17D6RBQ6 530 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 USP17L19D6RCP7 530 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 USP17L20D6RJB6 530 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 F5H6K3 240 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 CA12O43570 354 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 PLA2G6O60733 806 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 OSBPP22059 807 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 SLC1A4P43007 532 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 MAP2K1Q02750 393 aaPredicted RBP11.99□□□□□ -0.49
HTT-204ENST00000508321 KLRC3Q07444 240 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 USP17L24Q0WX57 530 aa11.99□□□□□ -0.49
HTT-204ENST00000508321 PPP2R5BQ15173 497 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms