RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 CCDC85CA6NKD9 419 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 SLC22A31A6NKX4 558 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 UPK3BL1B0FP48 263 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 UPK3BL2E5RIL1 263 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 DNAJA2O60884 412 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 CLSTN1O94985 981 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 HTR3BO95264 441 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 GJB6O95452 261 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 ACRP10323 421 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 CDK11BP21127 795 aaKnown RBP2.69□□□□□ -1.98
SMN2-208ENST00000508258 GUCY2CP25092 1073 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 BNIP3Q12983 259 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 SQSTM1Q13501 440 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 PTPROQ16827 1216 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 ZC3H12AQ5D1E8 599 aaKnown RBP2.69□□□□□ -1.98
SMN2-208ENST00000508258 PPM1JQ5JR12 505 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 WIPI1Q5MNZ9 446 aaPredicted RBP2.69□□□□□ -1.98
SMN2-208ENST00000508258 TMEM201Q5SNT2 666 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 CDCP2Q5VXM1 449 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 SEZ6L2Q6UXD5 910 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 KIAA0907Q7Z7F0 614 aaPredicted RBP2.69□□□□□ -1.98
SMN2-208ENST00000508258 C12orf40Q86WS4 652 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 STK11IPQ8N1F8 1099 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 RNF214Q8ND24 703 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 ST13P5Q8NFI4 369 aaPredicted RBP2.69□□□□□ -1.98
SMN2-208ENST00000508258 NETO1Q8TDF5 533 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 BCL7CQ8WUZ0 217 aaPredicted RBP2.69□□□□□ -1.98
SMN2-208ENST00000508258 TMEM40Q8WWA1 233 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 ATG4CQ96DT6 458 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 DUSP23Q9BVJ7 150 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 CNNM2Q9H8M5 875 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 PAK6Q9NQU5 681 aaPredicted RBP2.69□□□□□ -1.98
SMN2-208ENST00000508258 GMIPQ9P107 970 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 REV1Q9UBZ9 1251 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 PCDHGC5Q9Y5F6 944 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 CORINQ9Y5Q5 1042 aa2.69□□□□□ -1.98
SMN2-208ENST00000508258 LTBP3Q9NS15 1303 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 ESYT3A0FGR9 886 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 B2RBV5 119 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 TNFRSF10CO14798 259 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 CDC45O75419 566 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 CEACAM5P06731 702 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 NEFMP07197 916 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 NME1P15531 152 aaKnown RBP2.68□□□□□ -1.98
SMN2-208ENST00000508258 CD96P40200 585 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 CHMP4BP1P59074 171 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 ERVK-24P63145 666 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 IFRD2Q12894 506 aaPredicted RBP2.68□□□□□ -1.98
SMN2-208ENST00000508258 ZYXQ15942 572 aaKnown RBP2.68□□□□□ -1.98
SMN2-208ENST00000508258 PPP2R5EQ16537 467 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 IFI16Q16666 785 aaKnown RBP2.68□□□□□ -1.98
SMN2-208ENST00000508258 AOC3Q16853 763 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 C2orf27AQ580R0 203 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 RNF187Q5TA31 235 aaPredicted RBP2.68□□□□□ -1.98
SMN2-208ENST00000508258 LARP1BQ659C4 914 aaKnown RBP2.68□□□□□ -1.98
SMN2-208ENST00000508258 OVOS1Q6IE37 1185 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 MRM1Q6IN84 353 aaKnown RBP2.68□□□□□ -1.98
SMN2-208ENST00000508258 C6orf15Q6UXA7 325 aaPredicted RBP2.68□□□□□ -1.98
SMN2-208ENST00000508258 UNC5AQ6ZN44 842 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 NLRC3Q7RTR2 1065 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 HDXQ7Z353 690 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 FAM178BQ8IXR5 827 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 PI4K2BQ8TCG2 481 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 THAP3Q8WTV1 239 aaPredicted RBP2.68□□□□□ -1.98
SMN2-208ENST00000508258 APPBP2Q92624 585 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 MISP3Q96FF7 219 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 ASIC4Q96FT7 647 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 HRASLS5Q96KN8 279 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 SLC9A7Q96T83 725 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 WNT10AQ9GZT5 417 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 TMX1Q9H3N1 280 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 GOLGA2P5Q9HBQ8 144 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 FANCLQ9NW38 375 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 IFT57Q9NWB7 429 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 GTF2IRD1Q9UHL9 959 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 ZMYM5Q9UJ78 669 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 ADAM30Q9UKF2 790 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 SLC12A7Q9Y666 1083 aa2.68□□□□□ -1.98
SMN2-208ENST00000508258 TMEM265A0A087WTH1 108 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 GNAT3A8MTJ3 354 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 BIN1O00499 593 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 DIAPH1O60610 1272 aaKnown RBP2.67□□□□□ -1.98
SMN2-208ENST00000508258 DDAH1O94760 285 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 CD8BP10966 210 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 YBX3P16989 372 aaKnown RBP eCLIP2.67□□□□□ -1.98
SMN2-208ENST00000508258 PLCG1P19174 1290 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 NTF4P34130 210 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 ETF1P62495 437 aaKnown RBP2.67□□□□□ -1.98
SMN2-208ENST00000508258 PRKCQQ04759 706 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 PDE4BQ07343 736 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 IKZF1Q13422 519 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 MLECQ14165 292 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 NCAPHQ15003 741 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 ZNF792Q3KQV3 632 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 MTERF2Q49AM1 385 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 ARSHQ5FYA8 562 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 LCE3BQ5TA77 95 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 ANGEL2Q5VTE6 544 aaKnown RBP2.67□□□□□ -1.98
SMN2-208ENST00000508258 NFXL1Q6ZNB6 911 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 C16orf86Q6ZW13 317 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms