RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 SH3RF3Q8TEJ3 882 aaPredicted RBP11.25□□□□□ -0.61
CAST-220ENST00000508117 SSH1Q8WYL5 1049 aa11.25□□□□□ -0.61
CAST-220ENST00000508117 NOL10Q9BSC4 688 aaKnown RBP11.25□□□□□ -0.61
CAST-220ENST00000508117 RAI14Q9P0K7 980 aa11.25□□□□□ -0.61
CAST-220ENST00000508117 TACC3Q9Y6A5 838 aa11.25□□□□□ -0.61
CAST-220ENST00000508117 TRIM43BA6NCK2 446 aa11.24□□□□□ -0.61
CAST-220ENST00000508117 SEPT4O43236 478 aa11.24□□□□□ -0.61
CAST-220ENST00000508117 CYP2C19P33261 490 aa11.24□□□□□ -0.61
CAST-220ENST00000508117 PLA2G5P39877 138 aa11.24□□□□□ -0.61
CAST-220ENST00000508117 USP14P54578 494 aa11.24□□□□□ -0.61
CAST-220ENST00000508117 ALDH1L2Q3SY69 923 aa11.24□□□□□ -0.61
CAST-220ENST00000508117 ATF7IPQ6VMQ6 1270 aa11.24□□□□□ -0.61
CAST-220ENST00000508117 TBC1D9Q6ZT07 1266 aa11.24□□□□□ -0.61
CAST-220ENST00000508117 ATXN2LQ8WWM7 1075 aaKnown RBP11.24□□□□□ -0.61
CAST-220ENST00000508117 MARVELD3Q96A59 401 aa11.24□□□□□ -0.61
CAST-220ENST00000508117 TRIM43Q96BQ3 446 aaPredicted RBP11.24□□□□□ -0.61
CAST-220ENST00000508117 TRIM34Q9BYJ4 488 aa11.24□□□□□ -0.61
CAST-220ENST00000508117 PRDM5Q9NQX1 630 aaPredicted RBP11.24□□□□□ -0.61
CAST-220ENST00000508117 FLT1P17948 1338 aa11.24□□□□□ -0.61
CAST-220ENST00000508117 BDP1A6H8Y1 2624 aa11.23□□□□□ -0.61
CAST-220ENST00000508117 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.23□□□□□ -0.61
CAST-220ENST00000508117 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.23□□□□□ -0.61
CAST-220ENST00000508117 GDF11O95390 407 aa11.23□□□□□ -0.61
CAST-220ENST00000508117 UQCRFS1P1P0C7P4 283 aa11.23□□□□□ -0.61
CAST-220ENST00000508117 TATDN1Q6P1N9 297 aa11.23□□□□□ -0.61
CAST-220ENST00000508117 PI16Q6UXB8 463 aa11.23□□□□□ -0.61
CAST-220ENST00000508117 SH3RF1Q7Z6J0 888 aa11.23□□□□□ -0.61
CAST-220ENST00000508117 USP38Q8NB14 1042 aa11.23□□□□□ -0.61
CAST-220ENST00000508117 RNPC3Q96LT9 517 aaKnown RBP11.23□□□□□ -0.61
CAST-220ENST00000508117 KIAA1683Q9H0B3 1180 aa11.23□□□□□ -0.61
CAST-220ENST00000508117 LRP2BPQ9P2M1 347 aa11.23□□□□□ -0.61
CAST-220ENST00000508117 MYO9BQ13459 2157 aa11.23□□□□□ -0.61
CAST-220ENST00000508117 SPDYE16A6NNV3 312 aaPredicted RBP11.22□□□□□ -0.61
CAST-220ENST00000508117 KIAA0355O15063 1070 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 HLA-DOAP06340 250 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 DNAJB2P25686 324 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 MCAMP43121 646 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 TFCP2Q12800 502 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 MTX1Q13505 466 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 GRIN2CQ14957 1233 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 LRRC41Q15345 812 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 SHROOM1Q2M3G4 852 aaPredicted RBP11.22□□□□□ -0.61
CAST-220ENST00000508117 AKNAD1Q5T1N1 836 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 WDR78Q5VTH9 848 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 NAA16Q6N069 864 aaPredicted RBP11.22□□□□□ -0.61
CAST-220ENST00000508117 DPP9Q86TI2 863 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 SHCBP1Q8NEM2 672 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 TGFBRAP1Q8WUH2 860 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 AATFQ9NY61 560 aaKnown RBP eCLIP11.22□□□□□ -0.61
CAST-220ENST00000508117 BTBD7Q9P203 1132 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 NRBP1Q9UHY1 535 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 PALD1Q9ULE6 856 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 PHF24Q9UPV7 400 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 NDUFB9Q9Y6M9 179 aa11.22□□□□□ -0.61
CAST-220ENST00000508117 SMCHD1A6NHR9 2005 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 GH2P01242 217 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 CLTBP09497 229 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 VCAM1P19320 739 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 ITGB8P26012 769 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 ADORA2AP29274 412 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 ADCYAP1R1P41586 468 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 TLE2Q04725 743 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 GORABQ5T7V8 394 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 MAPKAPK5Q8IW41 473 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 ABRAQ8N0Z2 381 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 NEUROD6Q96NK8 337 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 FEZ1Q99689 392 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 EHD4Q9H223 541 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 ZNF576Q9H609 170 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 SLC5A4Q9NY91 659 aa11.21□□□□□ -0.61
CAST-220ENST00000508117 MYH1P12882 1939 aa11.21□□□□□ -0.62
CAST-220ENST00000508117 EPHB4P54760 987 aa11.2□□□□□ -0.62
CAST-220ENST00000508117 CERS3Q8IU89 383 aa11.2□□□□□ -0.62
CAST-220ENST00000508117 FAM122AQ96E09 287 aa11.2□□□□□ -0.62
CAST-220ENST00000508117 TOX2Q96NM4 488 aa11.2□□□□□ -0.62
CAST-220ENST00000508117 ASB2Q96Q27 587 aa11.2□□□□□ -0.62
CAST-220ENST00000508117 HOXC10Q9NYD6 342 aa11.2□□□□□ -0.62
CAST-220ENST00000508117 ARIH1Q9Y4X5 557 aaPredicted RBP11.2□□□□□ -0.62
CAST-220ENST00000508117 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.2□□□□□ -0.62
CAST-220ENST00000508117 A0A0G2JMZ2 1700 aa11.2□□□□□ -0.62
CAST-220ENST00000508117 ROBO3Q96MS0 1386 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 E9PSI1 815 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 SRGAP3O43295 1099 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 RAG1P15918 1043 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 EMP3P54852 163 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 FPGSQ05932 587 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 COG2Q14746 738 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 ANKRD33Q7Z3H0 272 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 ADGRA1Q86SQ6 560 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 MB21D1Q8N884 522 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 TIFAQ96CG3 184 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 GAS2L1Q99501 681 aaPredicted RBP11.19□□□□□ -0.62
CAST-220ENST00000508117 MOV10L1Q9BXT6 1211 aaKnown RBP11.19□□□□□ -0.62
CAST-220ENST00000508117 MROH8Q9H579 483 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 THEGQ9P2T0 379 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 SERPINB13Q9UIV8 391 aa11.19□□□□□ -0.62
CAST-220ENST00000508117 ZNFX1Q9P2E3 1918 aaKnown RBP11.19□□□□□ -0.62
CAST-220ENST00000508117 COBLO75128 1261 aa11.18□□□□□ -0.62
CAST-220ENST00000508117 MRPS5P82675 430 aaKnown RBP11.18□□□□□ -0.62
CAST-220ENST00000508117 ZYXQ15942 572 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms