RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 FAM86C1Q9NVL1 165 aa6.07□□□□□ -1.44
HMGB1P28-201ENST00000507778 C9IYK1 514 aa6.06□□□□□ -1.44
HMGB1P28-201ENST00000507778 ADMP35318 185 aa6.06□□□□□ -1.44
HMGB1P28-201ENST00000507778 PLA2G4EQ3MJ16 856 aa6.06□□□□□ -1.44
HMGB1P28-201ENST00000507778 MTERF2Q49AM1 385 aa6.06□□□□□ -1.44
HMGB1P28-201ENST00000507778 CYP27C1Q4G0S4 372 aa6.06□□□□□ -1.44
HMGB1P28-201ENST00000507778 RNF141Q8WVD5 230 aa6.06□□□□□ -1.44
HMGB1P28-201ENST00000507778 GATA6Q92908 595 aa6.06□□□□□ -1.44
HMGB1P28-201ENST00000507778 FBXL18Q96ME1 805 aa6.06□□□□□ -1.44
HMGB1P28-201ENST00000507778 DNAJC7Q99615 494 aa6.06□□□□□ -1.44
HMGB1P28-201ENST00000507778 ASPNQ9BXN1 380 aa6.06□□□□□ -1.44
HMGB1P28-201ENST00000507778 TPSG1Q9NRR2 321 aa6.06□□□□□ -1.44
HMGB1P28-201ENST00000507778 COL17A1Q9UMD9 1497 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P28-201ENST00000507778 ANKRD34BA5PLL1 514 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 MSTNO14793 375 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 SUSD5O60279 629 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 NAT2P11245 290 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 ZNF143P52747 638 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 CYP27A1Q02318 531 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 TCEAL1Q15170 157 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 ANKRD39Q53RE8 183 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 AXDND1Q5T1B0 1012 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 RNF43Q68DV7 783 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 HEATR6Q6AI08 1181 aaKnown RBP6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 FBXL6Q8N531 539 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 ZNF669Q96BR6 464 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 COX4I2Q96KJ9 171 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 APBA2Q99767 749 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 HAUS7Q99871 368 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 EPN3Q9H201 632 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 PRDM5Q9NQX1 630 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 GTF2IRD1Q9UHL9 959 aa6.05□□□□□ -1.44
HMGB1P28-201ENST00000507778 ITGB2P05107 769 aa6.04□□□□□ -1.44
HMGB1P28-201ENST00000507778 AUHQ13825 339 aaKnown RBP6.04□□□□□ -1.44
HMGB1P28-201ENST00000507778 SFRP5Q5T4F7 317 aa6.04□□□□□ -1.44
HMGB1P28-201ENST00000507778 DUSP27Q5VZP5 1158 aa6.04□□□□□ -1.44
HMGB1P28-201ENST00000507778 FAM214BQ7L5A3 538 aa6.04□□□□□ -1.44
HMGB1P28-201ENST00000507778 C7orf61Q8IZ16 206 aa6.04□□□□□ -1.44
HMGB1P28-201ENST00000507778 MFSD14AQ96MC6 490 aa6.04□□□□□ -1.44
HMGB1P28-201ENST00000507778 TBX22Q9Y458 520 aa6.04□□□□□ -1.44
HMGB1P28-201ENST00000507778 CADPSQ9ULU8 1353 aa6.04□□□□□ -1.44
HMGB1P28-201ENST00000507778 CNTNAP4Q9C0A0 1308 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 FAM170BA6NMN3 283 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 CBX7O95931 251 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 EPHX1P07099 455 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 NFIAQ12857 509 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 NBPF9Q3BBW0 867 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 SV2CQ496J9 727 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 DCAF15Q66K64 600 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 SDE2Q6IQ49 451 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 SPATC1Q76KD6 591 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 ADAT2Q7Z6V5 191 aaKnown RBP6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 JAZF1Q86VZ6 243 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 LILRB2Q8N423 598 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 HEXIM2Q96MH2 286 aaKnown RBP6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 GBP3Q9H0R5 595 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 SUSD2Q9UGT4 822 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 PFDN2Q9UHV9 154 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 ZMYM5Q9UJ78 669 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 FBXL21Q9UKT6 434 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 KCNH3Q9ULD8 1083 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 ZNF451Q9Y4E5 1061 aa6.03□□□□□ -1.44
HMGB1P28-201ENST00000507778 AGRPO00253 132 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 IGF2BP3O00425 579 aaKnown RBP eCLIP6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 GSC2O15499 205 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 CBFA2T2O43439 604 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 LRRN2O75325 713 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 PPM1BO75688 479 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 F13BP05160 661 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 H2AFB1P0C5Y9 115 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 H2AFB2P0C5Z0 115 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 CD247P20963 164 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 KIR3DL1P43629 444 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 SSRP1Q08945 709 aaKnown RBP6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 DOC2BQ14184 412 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 SLC10A6Q3KNW5 377 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 ZNF765Q7L2R6 523 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 SHISA5Q8N114 240 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 FAM177A1Q8N128 213 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 RNPC3Q96LT9 517 aaKnown RBP6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 FGD4Q96M96 766 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 DBNDD2Q9BQY9 259 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 KLHL25Q9H0H3 589 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 GP6Q9HCN6 339 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 ATG3Q9NT62 314 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 WHRNQ9P202 907 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 PCDHB12Q9Y5F1 795 aa6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 MRPL42Q9Y6G3 142 aaKnown RBP6.02□□□□□ -1.45
HMGB1P28-201ENST00000507778 KDM2BQ8NHM5 1336 aa6.01□□□□□ -1.45
HMGB1P28-201ENST00000507778 IQCA1LA6NCM1 817 aa6.01□□□□□ -1.45
HMGB1P28-201ENST00000507778 DIAPH1O60610 1272 aaKnown RBP6.01□□□□□ -1.45
HMGB1P28-201ENST00000507778 IGLV1-40P01703 118 aa6.01□□□□□ -1.45
HMGB1P28-201ENST00000507778 CANXP27824 592 aaKnown RBP6.01□□□□□ -1.45
HMGB1P28-201ENST00000507778 NOL9Q5SY16 702 aaKnown RBP6.01□□□□□ -1.45
HMGB1P28-201ENST00000507778 C22orf34Q6ZV56 151 aa6.01□□□□□ -1.45
HMGB1P28-201ENST00000507778 LRRC47Q8N1G4 583 aaKnown RBP6.01□□□□□ -1.45
HMGB1P28-201ENST00000507778 PPP1R14AQ96A00 147 aa6.01□□□□□ -1.45
HMGB1P28-201ENST00000507778 METTL22Q9BUU2 404 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P28-201ENST00000507778 PRDM14Q9GZV8 571 aa6.01□□□□□ -1.45
HMGB1P28-201ENST00000507778 CWC22Q9HCG8 908 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 245.3 ms