RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 ATRNO75882 1429 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 CCAR2Q8N163 923 aaKnown RBP10.7□□□□□ -0.7
NEK1-203ENST00000507142 SLC4A9Q96Q91 983 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 MAP7D2Q96T17 732 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 MED23Q9ULK4 1368 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 CDC42EP5Q6NZY7 148 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 HHIPL2Q6UWX4 724 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 USP37Q86T82 979 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 RTEL1Q9NZ71 1219 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 VPS54Q9P1Q0 977 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 A0A0U1RQG5 324 aaPredicted RBP10.7□□□□□ -0.7
NEK1-203ENST00000507142 USP8P40818 1118 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 MTMR2Q13614 643 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 HAUS3Q68CZ6 603 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 PPFIBP1Q86W92 1011 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.7□□□□□ -0.7
NEK1-203ENST00000507142 USP26Q9BXU7 913 aa10.7□□□□□ -0.7
NEK1-203ENST00000507142 USP17L15C9J2P7 530 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 USP17L13C9JLJ4 530 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 USP17L11C9JVI0 530 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 USP17L18D6R9N7 530 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 USP17L22D6RA61 530 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 USP17L17D6RBQ6 530 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 USP17L19D6RCP7 530 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 USP17L20D6RJB6 530 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 SSR1P43307 286 aaKnown RBP10.69□□□□□ -0.7
NEK1-203ENST00000507142 PTH1RQ03431 593 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 USP17L24Q0WX57 530 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 SNRNP48Q6IEG0 339 aaKnown RBP10.69□□□□□ -0.7
NEK1-203ENST00000507142 TMED8Q6PL24 325 aaPredicted RBP10.69□□□□□ -0.7
NEK1-203ENST00000507142 FAM151AQ8WW52 585 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 DDAH1O94760 285 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 PRR16Q569H4 304 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 FANCBQ8NB91 859 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 IL27Q8NEV9 243 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 GPKOWQ92917 476 aaPredicted RBP eCLIP10.69□□□□□ -0.72e-6■■■□□ 15.9
NEK1-203ENST00000507142 RAVER2Q9HCJ3 691 aaKnown RBP10.69□□□□□ -0.7
NEK1-203ENST00000507142 FBXO40Q9UH90 709 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 MYL3P08590 195 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 SMTNP53814 917 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 RSPH3Q86UC2 560 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 FKBP15Q5T1M5 1219 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 SLC44A5Q8NCS7 719 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 RBM46Q8TBY0 533 aaKnown RBP10.69□□□□□ -0.7
NEK1-203ENST00000507142 MMP19Q99542 508 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 UTYO14607 1347 aa10.69□□□□□ -0.7
NEK1-203ENST00000507142 ENTPD3O75355 529 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 KRT13P13646 458 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 GTF2A2P52657 109 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 MTX1Q13505 466 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 RABL6Q3YEC7 729 aaPredicted RBP10.68□□□□□ -0.7
NEK1-203ENST00000507142 USP50Q70EL3 339 aaPredicted RBP10.68□□□□□ -0.7
NEK1-203ENST00000507142 PLA2G4DQ86XP0 818 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 RPAP3Q9H6T3 665 aaPredicted RBP10.68□□□□□ -0.7
NEK1-203ENST00000507142 CIZ1Q9ULV3 898 aaPredicted RBP10.68□□□□□ -0.7
NEK1-203ENST00000507142 FCER1AP12319 257 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 KLRK1P26718 216 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 STRN3Q13033 797 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 MCTP2Q6DN12 878 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 HACE1Q8IYU2 909 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 CCDC102AQ96A19 550 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 AKT1S1Q96B36 256 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 SUGCTQ9HAC7 445 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 KCNJ14Q9UNX9 436 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 VWA3AA6NCI4 1184 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 EEF2P13639 858 aaKnown RBP10.68□□□□□ -0.7
NEK1-203ENST00000507142 CCND2P30279 289 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 FAM160B1Q5W0V3 765 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 CHADLQ6NUI6 762 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 KANK3Q6NY19 840 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 ATG9AQ7Z3C6 839 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 DIS3L2Q8IYB7 885 aaKnown RBP10.68□□□□□ -0.7
NEK1-203ENST00000507142 ZNF280CQ8ND82 737 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 TDRD7Q8NHU6 1098 aaKnown RBP10.68□□□□□ -0.7
NEK1-203ENST00000507142 FERMT2Q96AC1 680 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 DHX58Q96C10 678 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 OSBPL5Q9H0X9 879 aaPredicted RBP10.68□□□□□ -0.7
NEK1-203ENST00000507142 BMS1Q14692 1282 aaKnown RBP10.68□□□□□ -0.7
NEK1-203ENST00000507142 CALCRLQ16602 461 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 OTUD6AQ7L8S5 288 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 NBPF11Q86T75 865 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 STRBPQ96SI9 672 aaKnown RBP10.68□□□□□ -0.7
NEK1-203ENST00000507142 TSPY26PQ9H489 355 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 FEM1BQ9UK73 627 aa10.68□□□□□ -0.7
NEK1-203ENST00000507142 C3orf67Q6ZVT6 689 aa10.67□□□□□ -0.7
NEK1-203ENST00000507142 DCP1AQ9NPI6 582 aaPredicted RBP10.67□□□□□ -0.7
NEK1-203ENST00000507142 MTIF2P46199 727 aaKnown RBP10.67□□□□□ -0.7
NEK1-203ENST00000507142 NBPF9Q3BBW0 867 aa10.67□□□□□ -0.7
NEK1-203ENST00000507142 TPH2Q8IWU9 490 aa10.67□□□□□ -0.7
NEK1-203ENST00000507142 IMPG2Q9BZV3 1241 aa10.67□□□□□ -0.7
NEK1-203ENST00000507142 RNF207Q6ZRF8 634 aa10.67□□□□□ -0.7
NEK1-203ENST00000507142 KCNG4Q8TDN1 519 aa10.67□□□□□ -0.7
NEK1-203ENST00000507142 NSUN4Q96CB9 384 aaKnown RBP10.67□□□□□ -0.7
NEK1-203ENST00000507142 PSMD1Q99460 953 aa10.67□□□□□ -0.7
NEK1-203ENST00000507142 VPS33BQ9H267 617 aa10.67□□□□□ -0.7
NEK1-203ENST00000507142 PRDM5Q9NQX1 630 aaPredicted RBP10.67□□□□□ -0.7
NEK1-203ENST00000507142 TMOD1P28289 359 aa10.67□□□□□ -0.7
NEK1-203ENST00000507142 DEKP35659 375 aaKnown RBP10.67□□□□□ -0.7
NEK1-203ENST00000507142 SYKP43405 635 aa10.67□□□□□ -0.7
NEK1-203ENST00000507142 HSP90AA2PQ14568 343 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms