RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 PPIL2Q13356 520 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 SNAPC2Q13487 334 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 MTFR1Q15390 333 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 SLC9C1Q4G0N8 1177 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 HABP4Q5JVS0 413 aaKnown RBP8.09□□□□□ -1.11
NEDD4-206ENST00000507063 INTS3Q68E01 1043 aaKnown RBP8.09□□□□□ -1.11
NEDD4-206ENST00000507063 C17orf99Q6UX52 265 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 SH3BP5LQ7L8J4 393 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 TRMT2AQ8IZ69 625 aaKnown RBP8.09□□□□□ -1.11
NEDD4-206ENST00000507063 LINC00528Q8N1L1 170 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 FAM151AQ8WW52 585 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 FOXJ1Q92949 421 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 ZFAND3Q9H8U3 227 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 GOPCQ9HD26 462 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 SMC4Q9NTJ3 1288 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 USP40Q9NVE5 1235 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 TNNQ9UQP3 1299 aa8.09□□□□□ -1.11
NEDD4-206ENST00000507063 LRRFIP2Q9Y608 721 aaKnown RBP8.09□□□□□ -1.11
NEDD4-206ENST00000507063 LOC100996750A0A140TA64 210 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 PHF20L1A8MW92 1017 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 CYP2C8P10632 490 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 CETPP11597 493 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 RFC5P40937 340 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 ATP2B3Q16720 1220 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 TMEM132AQ24JP5 1023 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 C4orf48Q5BLP8 95 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 FKBP1CQ5VVH2 108 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 GPAT2Q6NUI2 795 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 CCDC84Q86UT8 332 aaPredicted RBP8.08□□□□□ -1.12
NEDD4-206ENST00000507063 TMEM151AQ8N4L1 468 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 WDR66Q8TBY9 1149 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 ZNF384Q8TF68 577 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 MEIS3Q99687 375 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 TSEN34Q9BSV6 310 aaKnown RBP8.08□□□□□ -1.12
NEDD4-206ENST00000507063 ZNF341Q9BYN7 854 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 KRTAP4-6Q9BYQ5 205 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 HMX1Q9NP08 348 aaPredicted RBP8.08□□□□□ -1.12
NEDD4-206ENST00000507063 TMOD2Q9NZR1 351 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 ZNF112Q9UJU3 913 aa8.08□□□□□ -1.12
NEDD4-206ENST00000507063 KIF16BQ96L93 1317 aa8.07□□□□□ -1.12
NEDD4-206ENST00000507063 DDTLA6NHG4 134 aaPredicted RBP8.07□□□□□ -1.12
NEDD4-206ENST00000507063 PDHXO00330 501 aa8.07□□□□□ -1.12
NEDD4-206ENST00000507063 LDHBP07195 334 aaKnown RBP8.07□□□□□ -1.12
NEDD4-206ENST00000507063 UBTFL1P0CB47 393 aaPredicted RBP8.07□□□□□ -1.12
NEDD4-206ENST00000507063 ZEB1P37275 1124 aaPredicted RBP8.07□□□□□ -1.12
NEDD4-206ENST00000507063 PSMC4P43686 418 aa8.07□□□□□ -1.12
NEDD4-206ENST00000507063 PPATQ06203 517 aa8.07□□□□□ -1.12
NEDD4-206ENST00000507063 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.07□□□□□ -1.12
NEDD4-206ENST00000507063 SLC4A8Q2Y0W8 1093 aa8.07□□□□□ -1.12
NEDD4-206ENST00000507063 ALDH1L2Q3SY69 923 aa8.07□□□□□ -1.12
NEDD4-206ENST00000507063 CCDC102BQ68D86 513 aa8.07□□□□□ -1.12
NEDD4-206ENST00000507063 MEIOBQ8N635 442 aa8.07□□□□□ -1.12
NEDD4-206ENST00000507063 DDX4Q9NQI0 724 aaKnown RBP8.07□□□□□ -1.12
NEDD4-206ENST00000507063 CEP126Q9P2H0 1117 aa8.07□□□□□ -1.12
NEDD4-206ENST00000507063 SUGT1Q9Y2Z0 365 aa8.07□□□□□ -1.12
NEDD4-206ENST00000507063 ADGRA2Q96PE1 1338 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 LAMA3Q16787 3333 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 FAM196BA6NMK8 535 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 CIAO1O76071 339 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 RGS3P49796 1198 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 TFCP2Q12800 502 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 PICALMQ13492 652 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 RASGRF1Q13972 1273 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 DCAF15Q66K64 600 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 PI16Q6UXB8 463 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 TBC1D9Q6ZT07 1266 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 NBPF11Q86T75 865 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 EPS8L1Q8TE68 723 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 SHISA4Q96DD7 197 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 ABCF2Q9UG63 623 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 GABRQQ9UN88 632 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 KCNH4Q9UQ05 1017 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 ZHX2Q9Y6X8 837 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 ATRNL1Q5VV63 1379 aa8.06□□□□□ -1.12
NEDD4-206ENST00000507063 MAST3O60307 1309 aa8.05□□□□□ -1.12
NEDD4-206ENST00000507063 RBBP6Q7Z6E9 1792 aaKnown RBP8.05□□□□□ -1.12
NEDD4-206ENST00000507063 H0YGN5 161 aa8.05□□□□□ -1.12
NEDD4-206ENST00000507063 WDHD1O75717 1129 aaPredicted RBP8.05□□□□□ -1.12
NEDD4-206ENST00000507063 AP1G2O75843 785 aa8.05□□□□□ -1.12
NEDD4-206ENST00000507063 IL15P40933 162 aaPredicted RBP8.05□□□□□ -1.12
NEDD4-206ENST00000507063 RARSP54136 660 aaKnown RBP8.05□□□□□ -1.12
NEDD4-206ENST00000507063 PRKCZQ05513 592 aa8.05□□□□□ -1.12
NEDD4-206ENST00000507063 RRP1BQ14684 758 aaKnown RBP8.05□□□□□ -1.12
NEDD4-206ENST00000507063 SUZ12Q15022 739 aaKnown RBP8.05□□□□□ -1.12
NEDD4-206ENST00000507063 ANKRD23Q86SG2 305 aa8.05□□□□□ -1.12
NEDD4-206ENST00000507063 XAGE2Q96GT9 111 aa8.05□□□□□ -1.12
NEDD4-206ENST00000507063 PCMTD1Q96MG8 357 aaPredicted RBP8.05□□□□□ -1.12
NEDD4-206ENST00000507063 COPRSQ9NQ92 184 aa8.05□□□□□ -1.12
NEDD4-206ENST00000507063 SRRDQ9UH36 339 aa8.05□□□□□ -1.12
NEDD4-206ENST00000507063 DENND2AQ9ULE3 1009 aa8.05□□□□□ -1.12
NEDD4-206ENST00000507063 RPAP1Q9BWH6 1393 aaPredicted RBP8.05□□□□□ -1.12
NEDD4-206ENST00000507063 SALL1Q9NSC2 1324 aa8.04□□□□□ -1.12
NEDD4-206ENST00000507063 MYH13Q9UKX3 1938 aa8.04□□□□□ -1.12
NEDD4-206ENST00000507063 A0A1B0GUL7 405 aa8.04□□□□□ -1.12
NEDD4-206ENST00000507063 SRGAP3O43295 1099 aa8.04□□□□□ -1.12
NEDD4-206ENST00000507063 NR3C2P08235 984 aa8.04□□□□□ -1.12
NEDD4-206ENST00000507063 BCRP11274 1271 aa8.04□□□□□ -1.12
NEDD4-206ENST00000507063 PTPRAP18433 802 aa8.04□□□□□ -1.12
NEDD4-206ENST00000507063 GRM5P41594 1212 aa8.04□□□□□ -1.12
NEDD4-206ENST00000507063 BTDP43251 543 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms