RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 KIF18AQ8NI77 898 aa6.82□□□□□ -1.32
CLDND1-213ENST00000506927 IFT43Q96FT9 208 aa6.82□□□□□ -1.32
CLDND1-213ENST00000506927 SRRTQ9BXP5 876 aaKnown RBP6.82□□□□□ -1.32
CLDND1-213ENST00000506927 HELLSQ9NRZ9 838 aa6.82□□□□□ -1.32
CLDND1-213ENST00000506927 ARGLU1Q9NWB6 273 aaPredicted RBP6.82□□□□□ -1.32
CLDND1-213ENST00000506927 CLIP2Q9UDT6 1046 aa6.82□□□□□ -1.32
CLDND1-213ENST00000506927 MAP3K2Q9Y2U5 619 aa6.82□□□□□ -1.32
CLDND1-213ENST00000506927 PHRF1Q9P1Y6 1649 aaKnown RBP6.82□□□□□ -1.32
CLDND1-213ENST00000506927 KDM3BQ7LBC6 1761 aa6.82□□□□□ -1.32
CLDND1-213ENST00000506927 LMO7Q8WWI1 1683 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 GOLGA6L9A6NEM1 432 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 CBFA2T2O43439 604 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 MICAL2O94851 1124 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 EPXP11678 715 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 TNNT1P13805 278 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 INPP5BP32019 993 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 IDH3AP50213 366 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 ZNF75DP51815 510 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 PTPN14Q15678 1187 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 MCMDC2Q4G0Z9 681 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 C16orf46Q6P387 395 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 ZNF530Q6P9A1 599 aaPredicted RBP6.81□□□□□ -1.32
CLDND1-213ENST00000506927 CPLX2Q6PUV4 134 aaKnown RBP6.81□□□□□ -1.32
CLDND1-213ENST00000506927 RAB44Q7Z6P3 723 aaPredicted RBP6.81□□□□□ -1.32
CLDND1-213ENST00000506927 FCHSD1Q86WN1 690 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 PLA2G4DQ86XP0 818 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 UNC5CLQ8IV45 518 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 JMYQ8N9B5 988 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 LEO1Q8WVC0 666 aaPredicted RBP6.81□□□□□ -1.32
CLDND1-213ENST00000506927 ANKRD7Q92527 254 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 GTF3C6Q969F1 213 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 BPIFA3Q9BQP9 254 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 TTC12Q9H892 705 aaPredicted RBP6.81□□□□□ -1.32
CLDND1-213ENST00000506927 GPR108Q9NPR9 543 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 CHPF2Q9P2E5 772 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 SPG7Q9UQ90 795 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 MED1Q15648 1581 aaPredicted RBP6.81□□□□□ -1.32
CLDND1-213ENST00000506927 PIK3C2AO00443 1686 aa6.81□□□□□ -1.32
CLDND1-213ENST00000506927 A0A1W2PQ27 194 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 A0A1W2PQ64 194 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 A0A1W2PQD8 194 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 RNMTO43148 476 aaKnown RBP6.8□□□□□ -1.32
CLDND1-213ENST00000506927 CDKL5O76039 1030 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 ZFYP08048 801 aaPredicted RBP6.8□□□□□ -1.32
CLDND1-213ENST00000506927 NBPF7P0C2Y1 421 aaPredicted RBP6.8□□□□□ -1.32
CLDND1-213ENST00000506927 GRNP28799 593 aaKnown RBP6.8□□□□□ -1.32
CLDND1-213ENST00000506927 SCNN1AP37088 669 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 RBM6P78332 1123 aaKnown RBP6.8□□□□□ -1.32
CLDND1-213ENST00000506927 SF3A1Q15459 793 aaKnown RBP6.8□□□□□ -1.32
CLDND1-213ENST00000506927 ME3Q16798 604 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 FOXD4L6Q3SYB3 417 aaPredicted RBP6.8□□□□□ -1.32
CLDND1-213ENST00000506927 ANO6Q4KMQ2 910 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 TEX35Q5T0J7 233 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 NUTM2GQ5VZR2 741 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 TSHZ3Q63HK5 1081 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 CEP135Q66GS9 1140 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 FOXD4L3Q6VB84 417 aaPredicted RBP6.8□□□□□ -1.32
CLDND1-213ENST00000506927 DHX32Q7L7V1 743 aaKnown RBP6.8□□□□□ -1.32
CLDND1-213ENST00000506927 FBXL16Q8N461 479 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 KCNG4Q8TDN1 519 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 ANKRD24Q8TF21 1146 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 ZNF274Q96GC6 653 aaPredicted RBP6.8□□□□□ -1.32
CLDND1-213ENST00000506927 ERO1AQ96HE7 468 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 DSCC1Q9BVC3 393 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 CBX8Q9HC52 389 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 COPRSQ9NQ92 184 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 DACT1Q9NYF0 836 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 SEPT3Q9UH03 358 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 RCOR1Q9UKL0 485 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 TPCN1Q9ULQ1 816 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 MRVI1Q9Y6F6 885 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 JCADQ9P266 1359 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 TCHHQ07283 1943 aa6.8□□□□□ -1.32
CLDND1-213ENST00000506927 WDR19Q8NEZ3 1342 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 OPLAHO14841 1288 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 ATP8B1O43520 1251 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 PFKFB2O60825 505 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 MAP4K4O95819 1239 aaPredicted RBP6.79□□□□□ -1.32
CLDND1-213ENST00000506927 FAM160A1Q05DH4 1040 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 NMIQ13287 307 aaPredicted RBP6.79□□□□□ -1.32
CLDND1-213ENST00000506927 FAM26DQ5JW98 314 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 ZSCAN25Q6NSZ9 544 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 SYNE3Q6ZMZ3 975 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 CCDC186Q7Z3E2 898 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 BRAPQ7Z569 592 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 TREML1Q86YW5 311 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 SPC24Q8NBT2 197 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 ZNF397Q8NF99 534 aaPredicted RBP6.79□□□□□ -1.32
CLDND1-213ENST00000506927 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.79□□□□□ -1.32
CLDND1-213ENST00000506927 BTBD6Q96KE9 485 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 TSPYL1Q9H0U9 437 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 PHAXQ9H814 394 aaKnown RBP6.79□□□□□ -1.32
CLDND1-213ENST00000506927 ATG3Q9NT62 314 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 MED23Q9ULK4 1368 aa6.79□□□□□ -1.32
CLDND1-213ENST00000506927 SH3TC1Q8TE82 1336 aa6.78□□□□□ -1.32
CLDND1-213ENST00000506927 CNTNAP5Q8WYK1 1306 aa6.78□□□□□ -1.32
CLDND1-213ENST00000506927 TNFRSF10BO14763 440 aa6.78□□□□□ -1.32
CLDND1-213ENST00000506927 ZSCAN12O43309 604 aa6.78□□□□□ -1.32
CLDND1-213ENST00000506927 SIN3BO75182 1162 aa6.78□□□□□ -1.32
CLDND1-213ENST00000506927 TAF5LO75529 589 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms