RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 ASCC2Q9H1I8 757 aaPredicted RBP23.53■■□□□ 1.36
SNX25-204ENST00000506896 IGKV6D-41A0A0C4DH26 115 aa23.52■■□□□ 1.36
SNX25-204ENST00000506896 A0A1W2PRG0 241 aa23.52■■□□□ 1.36
SNX25-204ENST00000506896 CDC45O75419 566 aa23.52■■□□□ 1.36
SNX25-204ENST00000506896 EEF2P13639 858 aaKnown RBP23.52■■□□□ 1.36
SNX25-204ENST00000506896 HAND2P61296 217 aa23.52■■□□□ 1.36
SNX25-204ENST00000506896 TFAP4Q01664 338 aa23.52■■□□□ 1.36
SNX25-204ENST00000506896 KIAA1211Q6ZU35 1233 aa23.52■■□□□ 1.36
SNX25-204ENST00000506896 LPAR1Q92633 364 aa23.52■■□□□ 1.36
SNX25-204ENST00000506896 ESYT1Q9BSJ8 1104 aa23.52■■□□□ 1.36
SNX25-204ENST00000506896 NYAP2Q9P242 653 aa23.52■■□□□ 1.36
SNX25-204ENST00000506896 SRRDQ9UH36 339 aa23.52■■□□□ 1.36
SNX25-204ENST00000506896 LAMA4Q16363 1823 aa23.52■■□□□ 1.36
SNX25-204ENST00000506896 KIAA0100Q14667 2235 aaKnown RBP23.51■■□□□ 1.35
SNX25-204ENST00000506896 TSPY2A6NKD2 308 aa23.51■■□□□ 1.35
SNX25-204ENST00000506896 RANBP6O60518 1105 aaKnown RBP23.51■■□□□ 1.35
SNX25-204ENST00000506896 FMNL1O95466 1100 aaPredicted RBP23.51■■□□□ 1.35
SNX25-204ENST00000506896 GCLCP48506 637 aaPredicted RBP23.51■■□□□ 1.35
SNX25-204ENST00000506896 IRX3P78415 501 aaPredicted RBP23.51■■□□□ 1.35
SNX25-204ENST00000506896 CLEC10AQ8IUN9 316 aa23.51■■□□□ 1.35
SNX25-204ENST00000506896 TOMM22Q9NS69 142 aa23.51■■□□□ 1.35
SNX25-204ENST00000506896 SYNPO2Q9UMS6 1093 aa23.51■■□□□ 1.35
SNX25-204ENST00000506896 U3KPZ7 1027 aaPredicted RBP23.51■■□□□ 1.35
SNX25-204ENST00000506896 ECM2O94769 699 aaPredicted RBP23.5■■□□□ 1.35
SNX25-204ENST00000506896 VCAM1P19320 739 aa23.5■■□□□ 1.35
SNX25-204ENST00000506896 HOXD10P28358 340 aa23.5■■□□□ 1.35
SNX25-204ENST00000506896 ATP2B2Q01814 1243 aa23.5■■□□□ 1.35
SNX25-204ENST00000506896 FAM110CQ1W6H9 321 aa23.5■■□□□ 1.35
SNX25-204ENST00000506896 FAM47AQ5JRC9 791 aa23.5■■□□□ 1.35
SNX25-204ENST00000506896 TBC1D10CQ8IV04 446 aa23.5■■□□□ 1.35
SNX25-204ENST00000506896 ANKRD13CQ8N6S4 541 aa23.5■■□□□ 1.35
SNX25-204ENST00000506896 P2RX7Q99572 595 aaKnown RBP23.5■■□□□ 1.35
SNX25-204ENST00000506896 NBPF3Q9H094 633 aa23.5■■□□□ 1.35
SNX25-204ENST00000506896 GOPCQ9HD26 462 aa23.5■■□□□ 1.35
SNX25-204ENST00000506896 MTMR4Q9NYA4 1195 aa23.5■■□□□ 1.35
SNX25-204ENST00000506896 USP17L15C9J2P7 530 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 USP17L13C9JLJ4 530 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 USP17L11C9JVI0 530 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 USP17L18D6R9N7 530 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 USP17L22D6RA61 530 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 USP17L17D6RBQ6 530 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 USP17L19D6RCP7 530 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 USP17L20D6RJB6 530 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 TNRC18O15417 2968 aaPredicted RBP23.49■■□□□ 1.35
SNX25-204ENST00000506896 TTLL1O95922 423 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 FCGRTP55899 365 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 MLLT1Q03111 559 aaPredicted RBP23.49■■□□□ 1.35
SNX25-204ENST00000506896 PTH1RQ03431 593 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 USP17L24Q0WX57 530 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 CEP95Q96GE4 821 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 VCPKMTQ9H867 229 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 INCENPQ9NQS7 918 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 BRCA2P51587 3418 aa23.49■■□□□ 1.35
SNX25-204ENST00000506896 RRP12Q5JTH9 1297 aaKnown RBP23.48■■□□□ 1.35
SNX25-204ENST00000506896 MAP4K1Q92918 833 aa23.48■■□□□ 1.35
SNX25-204ENST00000506896 ZNF333Q96JL9 665 aa23.48■■□□□ 1.35
SNX25-204ENST00000506896 TACC3Q9Y6A5 838 aa23.48■■□□□ 1.35
SNX25-204ENST00000506896 SLC9C1Q4G0N8 1177 aa23.47■■□□□ 1.35
SNX25-204ENST00000506896 NBPF11Q86T75 865 aa23.47■■□□□ 1.35
SNX25-204ENST00000506896 GTF3C2Q8WUA4 911 aaPredicted RBP23.47■■□□□ 1.35
SNX25-204ENST00000506896 ESR2Q92731 530 aa23.47■■□□□ 1.35
SNX25-204ENST00000506896 MKL1Q969V6 931 aa23.47■■□□□ 1.35
SNX25-204ENST00000506896 CNNM2Q9H8M5 875 aa23.47■■□□□ 1.35
SNX25-204ENST00000506896 MORF4L1Q9UBU8 362 aa23.47■■□□□ 1.35
SNX25-204ENST00000506896 CLIP2Q9UDT6 1046 aa23.47■■□□□ 1.35
SNX25-204ENST00000506896 CATSPERGQ6ZRH7 1159 aa23.46■■□□□ 1.35
SNX25-204ENST00000506896 RBBP6Q7Z6E9 1792 aaKnown RBP23.46■■□□□ 1.35
SNX25-204ENST00000506896 MYPNQ86TC9 1320 aa23.46■■□□□ 1.35
SNX25-204ENST00000506896 RPAP3Q9H6T3 665 aaPredicted RBP23.46■■□□□ 1.35
SNX25-204ENST00000506896 TCP11L1Q9NUJ3 509 aa23.46■■□□□ 1.35
SNX25-204ENST00000506896 GABRQQ9UN88 632 aa23.46■■□□□ 1.35
SNX25-204ENST00000506896 WDR46O15213 610 aaKnown RBP23.45■■□□□ 1.34
SNX25-204ENST00000506896 HERVK_113P62684 666 aa23.45■■□□□ 1.34
SNX25-204ENST00000506896 PRKCZQ05513 592 aa23.45■■□□□ 1.34
SNX25-204ENST00000506896 POTEEQ6S8J3 1075 aa23.45■■□□□ 1.34
SNX25-204ENST00000506896 KRT23Q9C075 422 aa23.45■■□□□ 1.34
SNX25-204ENST00000506896 RBPJLQ9UBG7 517 aa23.45■■□□□ 1.34
SNX25-204ENST00000506896 NEDD4P46934 1319 aa23.44■■□□□ 1.34
SNX25-204ENST00000506896 SH3TC2Q8TF17 1288 aa23.44■■□□□ 1.34
SNX25-204ENST00000506896 LSG1Q9H089 658 aaKnown RBP23.44■■□□□ 1.34
SNX25-204ENST00000506896 ANO2Q9NQ90 1003 aa23.44■■□□□ 1.34
SNX25-204ENST00000506896 IL17RBQ9NRM6 502 aa23.44■■□□□ 1.34
SNX25-204ENST00000506896 POTEFA5A3E0 1075 aa23.43■■□□□ 1.34
SNX25-204ENST00000506896 NOVP48745 357 aa23.43■■□□□ 1.34
SNX25-204ENST00000506896 KIAA1755Q5JYT7 1200 aa23.43■■□□□ 1.34
SNX25-204ENST00000506896 SPICE1Q8N0Z3 855 aa23.43■■□□□ 1.34
SNX25-204ENST00000506896 GMCL1P1Q8NEA9 526 aa23.43■■□□□ 1.34
SNX25-204ENST00000506896 RAET1EQ8TD07 263 aa23.43■■□□□ 1.34
SNX25-204ENST00000506896 TANGO6Q9C0B7 1094 aa23.43■■□□□ 1.34
SNX25-204ENST00000506896 TXNRD2Q9NNW7 524 aa23.43■■□□□ 1.34
SNX25-204ENST00000506896 STX8Q9UNK0 236 aa23.43■■□□□ 1.34
SNX25-204ENST00000506896 RBM8AQ9Y5S9 174 aaKnown RBP23.43■■□□□ 1.34
SNX25-204ENST00000506896 MYH4Q9Y623 1939 aa23.43■■□□□ 1.34
SNX25-204ENST00000506896 F5H6K3 240 aa23.42■■□□□ 1.34
SNX25-204ENST00000506896 TNPO2O14787 897 aaKnown RBP23.42■■□□□ 1.34
SNX25-204ENST00000506896 CYP21A2P08686 494 aa23.42■■□□□ 1.34
SNX25-204ENST00000506896 GRK4P32298 578 aa23.42■■□□□ 1.34
SNX25-204ENST00000506896 FLT3LGP49771 235 aa23.42■■□□□ 1.34
SNX25-204ENST00000506896 KLRC3Q07444 240 aa23.42■■□□□ 1.34
SNX25-204ENST00000506896 TRDNQ13061 729 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms