RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 USP17L15C9J2P7 530 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 USP17L13C9JLJ4 530 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 USP17L11C9JVI0 530 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 USP17L18D6R9N7 530 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 USP17L22D6RA61 530 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 USP17L17D6RBQ6 530 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 USP17L19D6RCP7 530 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 USP17L20D6RJB6 530 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 ZNF213O14771 459 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 PEX10O60683 326 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 HERVK_113P62684 666 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 USP17L24Q0WX57 530 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 CATSPERGQ6ZRH7 1159 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 OTOP1Q7RTM1 612 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 ANKRD13CQ8N6S4 541 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 ABHD8Q96I13 439 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 ESYT1Q9BSJ8 1104 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 IL17RBQ9NRM6 502 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 PARP14Q460N5 1801 aa21.62■■□□□ 1.05
PDLIM7-216ENST00000506537 TSPY2A6NKD2 308 aa21.61■■□□□ 1.05
PDLIM7-216ENST00000506537 RANBP6O60518 1105 aaKnown RBP21.61■■□□□ 1.05
PDLIM7-216ENST00000506537 NMT2O60551 498 aa21.61■■□□□ 1.05
PDLIM7-216ENST00000506537 ECM2O94769 699 aaPredicted RBP21.61■■□□□ 1.05
PDLIM7-216ENST00000506537 RRP12Q5JTH9 1297 aaKnown RBP21.61■■□□□ 1.05
PDLIM7-216ENST00000506537 LPAR1Q92633 364 aa21.61■■□□□ 1.05
PDLIM7-216ENST00000506537 TOMM22Q9NS69 142 aa21.61■■□□□ 1.05
PDLIM7-216ENST00000506537 CLIP2Q9UDT6 1046 aa21.61■■□□□ 1.05
PDLIM7-216ENST00000506537 TRIM17Q9Y577 477 aa21.61■■□□□ 1.05
PDLIM7-216ENST00000506537 MGAMO43451 1857 aa21.6■■□□□ 1.05
PDLIM7-216ENST00000506537 GCLCP48506 637 aaPredicted RBP21.6■■□□□ 1.05
PDLIM7-216ENST00000506537 IMMTQ16891 758 aaKnown RBP21.6■■□□□ 1.05
PDLIM7-216ENST00000506537 FAM110CQ1W6H9 321 aa21.6■■□□□ 1.05
PDLIM7-216ENST00000506537 MFSD6Q6ZSS7 791 aa21.6■■□□□ 1.05
PDLIM7-216ENST00000506537 TXNRD2Q9NNW7 524 aa21.6■■□□□ 1.05
PDLIM7-216ENST00000506537 CTNNA3Q9UI47 895 aa21.6■■□□□ 1.05
PDLIM7-216ENST00000506537 A0A0G2JMZ2 1700 aa21.6■■□□□ 1.05
PDLIM7-216ENST00000506537 TTLL1O95922 423 aa21.59■■□□□ 1.05
PDLIM7-216ENST00000506537 PCP11498 1178 aaKnown RBP21.59■■□□□ 1.05
PDLIM7-216ENST00000506537 LRRC47Q8N1G4 583 aaKnown RBP21.59■■□□□ 1.05
PDLIM7-216ENST00000506537 MKL1Q969V6 931 aa21.59■■□□□ 1.05
PDLIM7-216ENST00000506537 TRIM47Q96LD4 638 aa21.59■■□□□ 1.05
PDLIM7-216ENST00000506537 EFCC1Q9HA90 598 aa21.59■■□□□ 1.05
PDLIM7-216ENST00000506537 GOPCQ9HD26 462 aa21.59■■□□□ 1.05
PDLIM7-216ENST00000506537 SPDYE16A6NNV3 312 aaPredicted RBP21.58■■□□□ 1.05
PDLIM7-216ENST00000506537 WDR46O15213 610 aaKnown RBP21.58■■□□□ 1.05
PDLIM7-216ENST00000506537 CDC45O75419 566 aa21.58■■□□□ 1.05
PDLIM7-216ENST00000506537 NOVP48745 357 aa21.58■■□□□ 1.05
PDLIM7-216ENST00000506537 MAP4K1Q92918 833 aa21.58■■□□□ 1.05
PDLIM7-216ENST00000506537 TANGO6Q9C0B7 1094 aa21.58■■□□□ 1.05
PDLIM7-216ENST00000506537 LSG1Q9H089 658 aaKnown RBP21.58■■□□□ 1.05
PDLIM7-216ENST00000506537 RNF41Q9H4P4 317 aaPredicted RBP21.58■■□□□ 1.05
PDLIM7-216ENST00000506537 RBPJLQ9UBG7 517 aa21.58■■□□□ 1.05
PDLIM7-216ENST00000506537 MORF4L1Q9UBU8 362 aa21.58■■□□□ 1.05
PDLIM7-216ENST00000506537 TAF6LQ9Y6J9 622 aa21.58■■□□□ 1.05
PDLIM7-216ENST00000506537 CNMDO75829 334 aa21.57■■□□□ 1.04
PDLIM7-216ENST00000506537 NDUFB10O96000 172 aa21.57■■□□□ 1.04
PDLIM7-216ENST00000506537 CYP21A2P08686 494 aa21.57■■□□□ 1.04
PDLIM7-216ENST00000506537 PSMC4P43686 418 aa21.57■■□□□ 1.04
PDLIM7-216ENST00000506537 KIF22Q14807 665 aa21.57■■□□□ 1.04
PDLIM7-216ENST00000506537 NUP88Q99567 741 aaPredicted RBP21.57■■□□□ 1.04
PDLIM7-216ENST00000506537 SYNPO2Q9UMS6 1093 aa21.57■■□□□ 1.04
PDLIM7-216ENST00000506537 U3KPZ7 1027 aaPredicted RBP21.57■■□□□ 1.04
PDLIM7-216ENST00000506537 F5H6K3 240 aa21.56■■□□□ 1.04
PDLIM7-216ENST00000506537 RAD21O60216 631 aa21.56■■□□□ 1.04
PDLIM7-216ENST00000506537 KLRC3Q07444 240 aa21.56■■□□□ 1.04
PDLIM7-216ENST00000506537 FAM83BQ5T0W9 1011 aa21.56■■□□□ 1.04
PDLIM7-216ENST00000506537 LBX2Q6XYB7 198 aa21.56■■□□□ 1.04
PDLIM7-216ENST00000506537 GMCL1P1Q8NEA9 526 aa21.56■■□□□ 1.04
PDLIM7-216ENST00000506537 PAGR1Q9BTK6 254 aa21.56■■□□□ 1.04
PDLIM7-216ENST00000506537 STX8Q9UNK0 236 aa21.56■■□□□ 1.04
PDLIM7-216ENST00000506537 RBM8AQ9Y5S9 174 aaKnown RBP21.56■■□□□ 1.04
PDLIM7-216ENST00000506537 PKN2Q16513 984 aaKnown RBP21.55■■□□□ 1.04
PDLIM7-216ENST00000506537 FBXO46Q6PJ61 603 aaPredicted RBP21.55■■□□□ 1.04
PDLIM7-216ENST00000506537 GTF3C2Q8WUA4 911 aaPredicted RBP21.55■■□□□ 1.04
PDLIM7-216ENST00000506537 ESR2Q92731 530 aa21.55■■□□□ 1.04
PDLIM7-216ENST00000506537 TCP11L1Q9NUJ3 509 aa21.55■■□□□ 1.04
PDLIM7-216ENST00000506537 FBXO28Q9NVF7 368 aa21.55■■□□□ 1.04
PDLIM7-216ENST00000506537 PCDH10Q9P2E7 1040 aa21.55■■□□□ 1.04
PDLIM7-216ENST00000506537 PTPN22Q9Y2R2 807 aa21.55■■□□□ 1.04
PDLIM7-216ENST00000506537 B4E1Z4 1266 aa21.54■■□□□ 1.04
PDLIM7-216ENST00000506537 KDM4AO75164 1064 aa21.54■■□□□ 1.04
PDLIM7-216ENST00000506537 FLOT1O75955 427 aa21.54■■□□□ 1.04
PDLIM7-216ENST00000506537 FMNL1O95466 1100 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-216ENST00000506537 ERVK-9P63128 1117 aa21.54■■□□□ 1.04
PDLIM7-216ENST00000506537 ERVK-24P63145 666 aa21.54■■□□□ 1.04
PDLIM7-216ENST00000506537 MLLT1Q03111 559 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-216ENST00000506537 COG2Q14746 738 aa21.54■■□□□ 1.04
PDLIM7-216ENST00000506537 Q3C1V9 767 aa21.54■■□□□ 1.04
PDLIM7-216ENST00000506537 RCSD1Q6JBY9 416 aa21.54■■□□□ 1.04
PDLIM7-216ENST00000506537 RASGRP2Q7LDG7 609 aa21.54■■□□□ 1.04
PDLIM7-216ENST00000506537 BTBD7Q9P203 1132 aa21.54■■□□□ 1.04
PDLIM7-216ENST00000506537 CENPFP49454 3210 aa21.54■■□□□ 1.04
PDLIM7-216ENST00000506537 DSG3P32926 999 aa21.53■■□□□ 1.04
PDLIM7-216ENST00000506537 FCGRTP55899 365 aa21.53■■□□□ 1.04
PDLIM7-216ENST00000506537 PPP4R3BQ5MIZ7 849 aa21.53■■□□□ 1.04
PDLIM7-216ENST00000506537 KIAA1211Q6ZU35 1233 aa21.53■■□□□ 1.04
PDLIM7-216ENST00000506537 STOX1Q6ZVD7 989 aa21.53■■□□□ 1.04
PDLIM7-216ENST00000506537 GPRC5AQ8NFJ5 357 aa21.53■■□□□ 1.04
PDLIM7-216ENST00000506537 ATG4CQ96DT6 458 aa21.53■■□□□ 1.04
PDLIM7-216ENST00000506537 ANO2Q9NQ90 1003 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms