RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 TSR1Q2NL82 804 aaKnown RBP8.66□□□□□ -1.02
GYPB-206ENST00000506516 CWC27Q6UX04 472 aaKnown RBP8.66□□□□□ -1.02
GYPB-206ENST00000506516 CCDC129Q6ZRS4 1044 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 ZNF444Q8N0Y2 327 aaPredicted RBP8.66□□□□□ -1.02
GYPB-206ENST00000506516 RUFY2Q8WXA3 655 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 BRI3BPQ8WY22 251 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 CCDC17Q96LX7 622 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 WDR18Q9BV38 432 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 CFHR5Q9BXR6 569 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 ZFYVE28Q9HCC9 887 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 PPP4R2Q9NY27 417 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 LHX6Q9UPM6 363 aa8.66□□□□□ -1.02
GYPB-206ENST00000506516 CYP2D7A0A087X1C5 515 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 A0A0G2JLL6 359 aaPredicted RBP8.65□□□□□ -1.02
GYPB-206ENST00000506516 BTBD19C9JJ37 291 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 USP17L10C9JJH3 530 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 PDHXO00330 501 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 BACE1P56817 501 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 PDE4BQ07343 736 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 PABPC4Q13310 644 aaKnown RBP eCLIP8.65□□□□□ -1.022e-6■■□□□ 11.4
GYPB-206ENST00000506516 ALX1Q15699 326 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 NOM1Q5C9Z4 860 aaKnown RBP8.65□□□□□ -1.02
GYPB-206ENST00000506516 GADL1Q6ZQY3 521 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 TMEM179Q6ZVK1 233 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 C16orf86Q6ZW13 317 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 PRRT2Q7Z6L0 340 aaPredicted RBP8.65□□□□□ -1.02
GYPB-206ENST00000506516 ANKRD23Q86SG2 305 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 FAM43AQ8N2R8 423 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 PROCA1Q8NCQ7 364 aaPredicted RBP8.65□□□□□ -1.02
GYPB-206ENST00000506516 DYNLL2Q96FJ2 89 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 TMOD4Q9NZQ9 345 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 ZBTB21Q9ULJ3 1066 aa8.65□□□□□ -1.02
GYPB-206ENST00000506516 THSD7BQ9C0I4 1608 aa8.65□□□□□ -1.03
GYPB-206ENST00000506516 CCDC171Q6TFL3 1326 aa8.64□□□□□ -1.03
GYPB-206ENST00000506516 A0A0D9SFI3 127 aa8.64□□□□□ -1.03
GYPB-206ENST00000506516 GPR25O00155 361 aa8.64□□□□□ -1.03
GYPB-206ENST00000506516 HSPD1P10809 573 aaKnown RBP8.64□□□□□ -1.03
GYPB-206ENST00000506516 GSPT1P15170 499 aaKnown RBP8.64□□□□□ -1.03
GYPB-206ENST00000506516 FECHP22830 423 aa8.64□□□□□ -1.03
GYPB-206ENST00000506516 USP14P54578 494 aa8.64□□□□□ -1.03
GYPB-206ENST00000506516 JAG1P78504 1218 aa8.64□□□□□ -1.03
GYPB-206ENST00000506516 CRHR2Q13324 411 aa8.64□□□□□ -1.03
GYPB-206ENST00000506516 TAF1CQ15572 869 aaPredicted RBP8.64□□□□□ -1.03
GYPB-206ENST00000506516 SH3D19Q5HYK7 790 aa8.64□□□□□ -1.03
GYPB-206ENST00000506516 CCDC84Q86UT8 332 aaPredicted RBP8.64□□□□□ -1.03
GYPB-206ENST00000506516 STK11IPQ8N1F8 1099 aa8.64□□□□□ -1.03
GYPB-206ENST00000506516 FEZ1Q99689 392 aa8.64□□□□□ -1.03
GYPB-206ENST00000506516 EPB41L4AQ9HCS5 686 aaPredicted RBP8.64□□□□□ -1.03
GYPB-206ENST00000506516 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.64□□□□□ -1.03
GYPB-206ENST00000506516 PNMA3Q9UL41 463 aa8.64□□□□□ -1.03
GYPB-206ENST00000506516 SLC45A1Q9Y2W3 748 aa8.64□□□□□ -1.03
GYPB-206ENST00000506516 ZNF213O14771 459 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 TLR2O60603 784 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 FKTNO75072 461 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 FGAP02671 866 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 HMGCS2P54868 508 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 PPARAQ07869 468 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 MTMR2Q13614 643 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 MOGSQ13724 837 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 SEPT2Q15019 361 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 ARHGEF6Q15052 776 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 VPS53Q5VIR6 699 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 GPAT2Q6NUI2 795 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 USP17L2Q6R6M4 530 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 ZNF589Q86UQ0 364 aaPredicted RBP8.63□□□□□ -1.03
GYPB-206ENST00000506516 SLC44A5Q8NCS7 719 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 PARK7Q99497 189 aaKnown RBP8.63□□□□□ -1.03
GYPB-206ENST00000506516 SH2D4AQ9H788 454 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 KANSL2Q9H9L4 492 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 ARHGEF10LQ9HCE6 1279 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 NPDC1Q9NQX5 325 aaPredicted RBP8.63□□□□□ -1.03
GYPB-206ENST00000506516 CTNNA3Q9UI47 895 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 AGTPBP1Q9UPW5 1226 aa8.63□□□□□ -1.03
GYPB-206ENST00000506516 FOCADQ5VW36 1801 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 SMIM22K7EJ46 135 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 PCP11498 1178 aaKnown RBP8.62□□□□□ -1.03
GYPB-206ENST00000506516 AKR1B1P15121 316 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 CHMLP26374 656 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 GUCY1A2P33402 732 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 SP3Q02447 781 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 KIF22Q14807 665 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 PPP4R3BQ5MIZ7 849 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 C6orf132Q5T0Z8 1188 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 COL13A1Q5TAT6 717 aaPredicted RBP8.62□□□□□ -1.03
GYPB-206ENST00000506516 ZNF296Q8WUU4 475 aaPredicted RBP8.62□□□□□ -1.03
GYPB-206ENST00000506516 DSCC1Q9BVC3 393 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 ADAM33Q9BZ11 813 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 KIAA1683Q9H0B3 1180 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 R3HDMLQ9H3Y0 253 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 ANAPC4Q9UJX5 808 aa8.62□□□□□ -1.03
GYPB-206ENST00000506516 ROBO3Q96MS0 1386 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 RAD50Q92878 1312 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 MYH1P12882 1939 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 TRIM66O15016 1216 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 PRDM1O75626 825 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 TSPY3P0CV98 308 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 TSPY8P0CW00 308 aa8.61□□□□□ -1.03
GYPB-206ENST00000506516 RASA1P20936 1047 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms