RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 RPTORQ8N122 1335 aa12.47□□□□□ -0.41
NR1I3-222ENST00000506018 FARP2O94887 1054 aaPredicted RBP12.47□□□□□ -0.41
NR1I3-222ENST00000506018 ZKSCAN1P17029 563 aaPredicted RBP12.47□□□□□ -0.41
NR1I3-222ENST00000506018 CYP2B6P20813 491 aa12.47□□□□□ -0.41
NR1I3-222ENST00000506018 GUCY1A2P33402 732 aa12.47□□□□□ -0.41
NR1I3-222ENST00000506018 COG2Q14746 738 aa12.47□□□□□ -0.41
NR1I3-222ENST00000506018 SLFNL1Q499Z3 407 aa12.47□□□□□ -0.41
NR1I3-222ENST00000506018 GPR142Q7Z601 462 aa12.47□□□□□ -0.41
NR1I3-222ENST00000506018 SLC44A5Q8NCS7 719 aa12.47□□□□□ -0.41
NR1I3-222ENST00000506018 NACAP1Q9BZK3 213 aa12.47□□□□□ -0.41
NR1I3-222ENST00000506018 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.47□□□□□ -0.41
NR1I3-222ENST00000506018 KANSL2Q9H9L4 492 aa12.47□□□□□ -0.41
NR1I3-222ENST00000506018 MKNK2Q9HBH9 465 aa12.47□□□□□ -0.41
NR1I3-222ENST00000506018 PAK6Q9NQU5 681 aaPredicted RBP12.47□□□□□ -0.41
NR1I3-222ENST00000506018 PCDHB15Q9Y5E8 787 aa12.47□□□□□ -0.41
NR1I3-222ENST00000506018 APPP05067 770 aa12.46□□□□□ -0.41
NR1I3-222ENST00000506018 AKR1B1P15121 316 aa12.46□□□□□ -0.41
NR1I3-222ENST00000506018 MX1P20591 662 aa12.46□□□□□ -0.41
NR1I3-222ENST00000506018 TDO2P48775 406 aa12.46□□□□□ -0.41
NR1I3-222ENST00000506018 ATP2B2Q01814 1243 aa12.46□□□□□ -0.41
NR1I3-222ENST00000506018 SBK1Q52WX2 424 aa12.46□□□□□ -0.41
NR1I3-222ENST00000506018 TSHZ3Q63HK5 1081 aa12.46□□□□□ -0.41
NR1I3-222ENST00000506018 CTR9Q6PD62 1173 aa12.46□□□□□ -0.41
NR1I3-222ENST00000506018 MB21D1Q8N884 522 aa12.46□□□□□ -0.41
NR1I3-222ENST00000506018 STRBPQ96SI9 672 aaKnown RBP12.46□□□□□ -0.41
NR1I3-222ENST00000506018 APBA2Q99767 749 aa12.46□□□□□ -0.41
NR1I3-222ENST00000506018 FSD1Q9BTV5 496 aa12.46□□□□□ -0.41
NR1I3-222ENST00000506018 GOPCQ9HD26 462 aa12.46□□□□□ -0.41
NR1I3-222ENST00000506018 TMX2Q9Y320 296 aa12.46□□□□□ -0.41
NR1I3-222ENST00000506018 MYH4Q9Y623 1939 aa12.46□□□□□ -0.42
NR1I3-222ENST00000506018 CYP2D7A0A087X1C5 515 aa12.45□□□□□ -0.42
NR1I3-222ENST00000506018 SPDYE16A6NNV3 312 aaPredicted RBP12.45□□□□□ -0.42
NR1I3-222ENST00000506018 MINDY4BA8MYZ0 360 aa12.45□□□□□ -0.42
NR1I3-222ENST00000506018 WDR46O15213 610 aaKnown RBP12.45□□□□□ -0.42
NR1I3-222ENST00000506018 GPAA1O43292 621 aa12.45□□□□□ -0.42
NR1I3-222ENST00000506018 SLC3A2P08195 630 aaKnown RBP12.45□□□□□ -0.42
NR1I3-222ENST00000506018 Q3C1V9 767 aa12.45□□□□□ -0.42
NR1I3-222ENST00000506018 ANKRD45Q5TZF3 282 aa12.45□□□□□ -0.42
NR1I3-222ENST00000506018 ANKLE1Q8NAG6 615 aa12.45□□□□□ -0.42
NR1I3-222ENST00000506018 CRBNQ96SW2 442 aa12.45□□□□□ -0.42
NR1I3-222ENST00000506018 PORCNQ9H237 461 aa12.45□□□□□ -0.42
NR1I3-222ENST00000506018 VCPKMTQ9H867 229 aa12.45□□□□□ -0.42
NR1I3-222ENST00000506018 NR2E3Q9Y5X4 410 aa12.45□□□□□ -0.42
NR1I3-222ENST00000506018 CEP290O15078 2479 aa12.45□□□□□ -0.42
NR1I3-222ENST00000506018 PARP14Q460N5 1801 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 A0A1W2PRG0 241 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 SLC15A5A6NIM6 579 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 RAD21O60216 631 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 FLOT1O75955 427 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 SLC34A2O95436 690 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 CHGBP05060 677 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 EVX2Q03828 476 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 MAP2K5Q13163 448 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 MORN1Q5T089 497 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 MFSD14CQ5VZR4 134 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 ZNF444Q8N0Y2 327 aaPredicted RBP12.44□□□□□ -0.42
NR1I3-222ENST00000506018 TRIB2Q92519 343 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 OSBP2Q969R2 916 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 SLC5A4Q9NY91 659 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 A0A0G2JMZ2 1700 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 RLFQ13129 1914 aa12.44□□□□□ -0.42
NR1I3-222ENST00000506018 GSG1L2A8MUP6 293 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 PATL2C9JE40 543 aaKnown RBP12.43□□□□□ -0.42
NR1I3-222ENST00000506018 STRNO43815 780 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 PEX10O60683 326 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 CNMDO75829 334 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
NR1I3-222ENST00000506018 PTPREP23469 700 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 HDAC1Q13547 482 aaPredicted RBP12.43□□□□□ -0.42
NR1I3-222ENST00000506018 PLS1Q14651 629 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 ERICH6BQ5W0A0 696 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 NECAB2Q7Z6G3 386 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 PI4K2BQ8TCG2 481 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 CRISPLD2Q9H0B8 497 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 ROBO3Q96MS0 1386 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 COL11A1P12107 1806 aaPredicted RBP12.43□□□□□ -0.42
NR1I3-222ENST00000506018 GREB1LQ9C091 1923 aaPredicted RBP12.43□□□□□ -0.42
NR1I3-222ENST00000506018 ZNFX1Q9P2E3 1918 aaKnown RBP12.43□□□□□ -0.42
NR1I3-222ENST00000506018 EEF2P13639 858 aaKnown RBP12.43□□□□□ -0.42
NR1I3-222ENST00000506018 PDE4BQ07343 736 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 UBE2Q1Q7Z7E8 422 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 DPP9Q86TI2 863 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 SPICE1Q8N0Z3 855 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 SHCBP1Q8NEM2 672 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 SPDYE1Q8NFV5 336 aaPredicted RBP12.43□□□□□ -0.42
NR1I3-222ENST00000506018 USP6NLQ92738 828 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 SPATC1LQ9H0A9 340 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 NAPBQ9H115 298 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 MROH8Q9H579 483 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 BTBD7Q9P203 1132 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 ZNF236Q9UL36 1845 aa12.43□□□□□ -0.42
NR1I3-222ENST00000506018 M0R2C6 588 aa12.42□□□□□ -0.42
NR1I3-222ENST00000506018 EVI5O60447 810 aa12.42□□□□□ -0.42
NR1I3-222ENST00000506018 GRB14Q14449 540 aa12.42□□□□□ -0.42
NR1I3-222ENST00000506018 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
NR1I3-222ENST00000506018 MAP3K21Q5TCX8 1036 aa12.42□□□□□ -0.42
NR1I3-222ENST00000506018 CLEC10AQ8IUN9 316 aa12.42□□□□□ -0.42
NR1I3-222ENST00000506018 IFNL3Q8IZI9 196 aa12.42□□□□□ -0.42
NR1I3-222ENST00000506018 EVI5LQ96CN4 794 aa12.42□□□□□ -0.42
NR1I3-222ENST00000506018 MOV10L1Q9BXT6 1211 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms