RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 DAGLBQ8NCG7 672 aa19.8■□□□□ 0.76
TRAPPC11-204ENST00000505676 SPZ1Q9BXG8 430 aa19.8■□□□□ 0.76
TRAPPC11-204ENST00000505676 MYO1BO43795 1136 aa19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 EVX2Q03828 476 aa19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 C2CD5Q86YS7 1000 aa19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 CCDC12Q8WUD4 166 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 MYH1P12882 1939 aa19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 PALM3A6NDB9 673 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 hCG_1984214I3L0E3 225 aa19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 ZNF75DP51815 510 aa19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 KRBA2Q6ZNG9 492 aa19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 C11orf57Q6ZUT1 292 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 ZNF713Q8N859 430 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 OXER1Q8TDS5 423 aa19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 TEKT1Q969V4 418 aa19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 SAP30BPQ9UHR5 308 aaKnown RBP19.79■□□□□ 0.76
TRAPPC11-204ENST00000505676 RIMBP2O15034 1052 aa19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 DHX8Q14562 1220 aaKnown RBP19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 CNNM3Q8NE01 707 aa19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 SUPT20HQ8NEM7 779 aa19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 MRFAP1L1Q96HT8 127 aa19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 TMEM47Q9BQJ4 181 aa19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 TRIM5Q9C035 493 aa19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 STK32BQ9NY57 414 aa19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 MAD2L2Q9UI95 211 aa19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 TTF2Q9UNY4 1162 aaKnown RBP19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 PCDHB6Q9Y5E3 794 aa19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 STRIP1Q5VSL9 837 aa19.78■□□□□ 0.76
TRAPPC11-204ENST00000505676 IKBKBO14920 756 aa19.77■□□□□ 0.76
TRAPPC11-204ENST00000505676 GABPAQ06546 454 aa19.77■□□□□ 0.76
TRAPPC11-204ENST00000505676 NPY5RQ15761 445 aa19.77■□□□□ 0.76
TRAPPC11-204ENST00000505676 ZNF622Q969S3 477 aaKnown RBP eCLIP19.77■□□□□ 0.767e-6■■□□□ 12.8
TRAPPC11-204ENST00000505676 STX8Q9UNK0 236 aa19.77■□□□□ 0.76
TRAPPC11-204ENST00000505676 USP17L3A6NCW0 530 aa19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 USP17L4A6NCW7 530 aa19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 NPM3O75607 178 aaKnown RBP19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 HLA-DOAP06340 250 aa19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 SLC15A2Q16348 729 aa19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 TTC38Q5R3I4 469 aa19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 USP17L1Q7RTZ2 530 aa19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 TRIML1Q8N9V2 468 aa19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 PCDHA4Q9UN74 947 aa19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 AP5Z1O43299 807 aa19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 DHX40Q8IX18 779 aaKnown RBP19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 SHISA4Q96DD7 197 aa19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 CLIC6Q96NY7 704 aa19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 EHD4Q9H223 541 aa19.76■□□□□ 0.75
TRAPPC11-204ENST00000505676 PARP1P09874 1014 aaKnown RBP19.75■□□□□ 0.75
TRAPPC11-204ENST00000505676 CT47A1Q5JQC4 288 aaPredicted RBP19.75■□□□□ 0.75
TRAPPC11-204ENST00000505676 ARL6IP4Q66PJ3 421 aaKnown RBP19.75■□□□□ 0.75
TRAPPC11-204ENST00000505676 BLIDQ8IZY5 108 aa19.75■□□□□ 0.75
TRAPPC11-204ENST00000505676 ZDHHC15Q96MV8 337 aa19.75■□□□□ 0.75
TRAPPC11-204ENST00000505676 DACH1Q9UI36 760 aa19.75■□□□□ 0.75
TRAPPC11-204ENST00000505676 ATP2C1P98194 919 aaPredicted RBP19.75■□□□□ 0.75
TRAPPC11-204ENST00000505676 CERS5Q8N5B7 392 aa19.75■□□□□ 0.75
TRAPPC11-204ENST00000505676 SLC44A5Q8NCS7 719 aa19.75■□□□□ 0.75
TRAPPC11-204ENST00000505676 FBXW7Q969H0 707 aa19.75■□□□□ 0.75
TRAPPC11-204ENST00000505676 DHX36Q9H2U1 1008 aaKnown RBP19.74■□□□□ 0.75
TRAPPC11-204ENST00000505676 BARHL2Q9NY43 387 aa19.74■□□□□ 0.75
TRAPPC11-204ENST00000505676 NEMFO60524 1076 aa19.74■□□□□ 0.75
TRAPPC11-204ENST00000505676 ASPRV1Q53RT3 343 aa19.74■□□□□ 0.75
TRAPPC11-204ENST00000505676 NT5DC1Q5TFE4 455 aa19.74■□□□□ 0.75
TRAPPC11-204ENST00000505676 OLFM4Q6UX06 510 aa19.74■□□□□ 0.75
TRAPPC11-204ENST00000505676 CCDC17Q96LX7 622 aa19.74■□□□□ 0.75
TRAPPC11-204ENST00000505676 OSBPL5Q9H0X9 879 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC11-204ENST00000505676 USP40Q9NVE5 1235 aa19.74■□□□□ 0.75
TRAPPC11-204ENST00000505676 SERPINB13Q9UIV8 391 aa19.74■□□□□ 0.75
TRAPPC11-204ENST00000505676 OFD1O75665 1012 aa19.73■□□□□ 0.75
TRAPPC11-204ENST00000505676 ORC2Q13416 577 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC11-204ENST00000505676 KLRF2D3W0D1 207 aa19.72■□□□□ 0.75
TRAPPC11-204ENST00000505676 LAD1O00515 517 aa19.72■□□□□ 0.75
TRAPPC11-204ENST00000505676 SLC4A8Q2Y0W8 1093 aa19.72■□□□□ 0.75
TRAPPC11-204ENST00000505676 PIBF1Q8WXW3 757 aa19.72■□□□□ 0.75
TRAPPC11-204ENST00000505676 RRP36Q96EU6 259 aaKnown RBP19.72■□□□□ 0.75
TRAPPC11-204ENST00000505676 CAMKK2Q96RR4 588 aa19.72■□□□□ 0.75
TRAPPC11-204ENST00000505676 IGKV6D-41A0A0C4DH26 115 aa19.72■□□□□ 0.75
TRAPPC11-204ENST00000505676 POSTNQ15063 836 aa19.72■□□□□ 0.75
TRAPPC11-204ENST00000505676 DOK7Q18PE1 504 aa19.72■□□□□ 0.75
TRAPPC11-204ENST00000505676 DPCR1Q3MIW9 517 aa19.72■□□□□ 0.75
TRAPPC11-204ENST00000505676 LONRF3Q496Y0 759 aa19.72■□□□□ 0.75
TRAPPC11-204ENST00000505676 AOPEPQ8N6M6 819 aa19.72■□□□□ 0.75
TRAPPC11-204ENST00000505676 SEC63Q9UGP8 760 aaKnown RBP19.72■□□□□ 0.75
TRAPPC11-204ENST00000505676 hCG_1642624A0A1W2PR95 340 aa19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 ESYT2A0FGR8 921 aa19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 SMC2O95347 1197 aa19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 GNA11P29992 359 aa19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 TERF1P54274 439 aa19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 METTL16Q86W50 562 aaKnown RBP19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 DRC7Q8IY82 874 aa19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 STAG2Q8N3U4 1231 aa19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 CEP95Q96GE4 821 aa19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 CSRNP2Q9H175 543 aa19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 MTMR4Q9NYA4 1195 aa19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 SERPINA10Q9UK55 444 aa19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 CRKP46108 304 aa19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 MDM2Q00987 491 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 APOBEC3HQ6NTF7 200 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms