RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 TFAP4Q01664 338 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 CNKSR2Q8WXI2 1034 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 BRI3BPQ8WY22 251 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 TMEM47Q9BQJ4 181 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 AS3MTQ9HBK9 375 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 MAD2L2Q9UI95 211 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 CLEC11AQ9Y240 323 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 MANSC4A6NHS7 340 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 B4E1Z4 1266 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 KIAA1211Q6ZU35 1233 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 SENP2Q9HC62 589 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 MORF4L1Q9UBU8 362 aa9.78□□□□□ -0.84
CDC42SE2-208ENST00000505065 WDR46O15213 610 aaKnown RBP9.77□□□□□ -0.84
CDC42SE2-208ENST00000505065 MCM5P33992 734 aa9.77□□□□□ -0.84
CDC42SE2-208ENST00000505065 CATSPERGQ6ZRH7 1159 aa9.77□□□□□ -0.84
CDC42SE2-208ENST00000505065 NBPF11Q86T75 865 aa9.77□□□□□ -0.84
CDC42SE2-208ENST00000505065 TNKSO95271 1327 aa9.77□□□□□ -0.84
CDC42SE2-208ENST00000505065 PDHBP11177 359 aa9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 USP14P54578 494 aa9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 NTRK3Q16288 839 aa9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 ACER1Q8TDN7 264 aa9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 SNX21Q969T3 373 aa9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 ZNF274Q96GC6 653 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 WDR33Q9C0J8 1336 aaKnown RBP9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 MYH7BA7E2Y1 1941 aa9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 MINDY4BA8MYZ0 360 aa9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 NMT2O60551 498 aa9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 FAM177A1Q8N128 213 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 C22orf23Q9BZE7 217 aa9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 RIOX1Q9H6W3 641 aa9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 GDF11O95390 407 aa9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 HAND2P61296 217 aa9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 BRPF3Q9ULD4 1205 aa9.77□□□□□ -0.85
CDC42SE2-208ENST00000505065 KDM4AO75164 1064 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 ECE1P42892 770 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 PPP2R5BQ15173 497 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 IFNL1Q8IU54 200 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 RANBP17Q9H2T7 1088 aaKnown RBP9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 FRMPD4Q14CM0 1322 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 PSMA5P28066 241 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 SNAPC2Q13487 334 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 TMTC2Q8N394 836 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 ELP3Q9H9T3 547 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 CSADQ9Y600 493 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 ZNF536O15090 1300 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 USP17L10C9JJH3 530 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 VEGFBP49765 207 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 ICA1Q05084 483 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 FAM47AQ5JRC9 791 aa9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 CRACR2BQ8N4Y2 399 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 GTF3C2Q8WUA4 911 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE2-208ENST00000505065 IGF2BP3O00425 579 aaKnown RBP eCLIP9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 PRC1O43663 620 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 APPP05067 770 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 BCRP11274 1271 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 CETPP11597 493 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 VCAM1P19320 739 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 OAZ1P54368 228 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 HUNKP57058 714 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 ZNF543Q08ER8 600 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 NOGQ13253 232 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 SH2D4AQ9H788 454 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 FASTKD5Q7L8L6 764 aaKnown RBP9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 SPZ1Q9BXG8 430 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 NDUFB10O96000 172 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 TSPY3P0CV98 308 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 TSPY8P0CW00 308 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 DEFB115Q30KQ5 88 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 TREML2Q5T2D2 321 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 ZNF444Q8N0Y2 327 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 STK36Q9NRP7 1315 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 APOA5Q6Q788 366 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 CAPNS2Q96L46 248 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 ZIC5Q96T25 663 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 ARHGEF10LQ9HCE6 1279 aa9.75□□□□□ -0.85
CDC42SE2-208ENST00000505065 PRDM1O75626 825 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 ZKSCAN1P17029 563 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 CUL4AQ13619 759 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 RABEP1Q15276 862 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 C17orf99Q6UX52 265 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 ZSCAN29Q8IWY8 852 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 MKNK2Q9HBH9 465 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 PICK1Q9NRD5 415 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 BTBD19C9JJ37 291 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 PFKFB2O60825 505 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 FDX1P10109 184 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 MTMR2Q13614 643 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 ASPRV1Q53RT3 343 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 GOPCQ9HD26 462 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 MCCP23508 829 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 CLEC10AQ8IUN9 316 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 USP6NLQ92738 828 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 SLC10A4Q96EP9 437 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 ZHX2Q9Y6X8 837 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 CNTNAP5Q8WYK1 1306 aa9.74□□□□□ -0.85
CDC42SE2-208ENST00000505065 F5H6K3 240 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 DSG3P32926 999 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 KLRC3Q07444 240 aa9.73□□□□□ -0.85
CDC42SE2-208ENST00000505065 SMARCC2Q8TAQ2 1214 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms