RNA–Protein interactions for RNA: ENST00000504971.1

FBXO38-208, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-208	ENST00000504971	C5	P01031	1676 aa		7.82	□□□□□ -1.16
FBXO38-208	ENST00000504971	KCP	Q6ZWJ8	1503 aa		7.82	□□□□□ -1.16
FBXO38-208	ENST00000504971	BCL9	O00512	1426 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	IQCA1L	A6NCM1	817 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971		A6NJY4	79 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	FAM25E	A8MYX2	175 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	MYL1	P05976	194 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	MYL3	P08590	195 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	GNAI3	P08754	354 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	EIF2S2	P20042	333 aa	Known RBP	7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	FSHR	P23945	695 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	SESN3	P58005	492 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	CCT2	P78371	535 aa	Known RBP	7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	EIF2B5	Q13144	721 aa	Known RBP	7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	SLC39A6	Q13433	755 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	RASA3	Q14644	834 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	LONRF1	Q17RB8	773 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	NOM1	Q5C9Z4	860 aa	Known RBP	7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	CPLX2	Q6PUV4	134 aa	Known RBP	7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	JAZF1	Q86VZ6	243 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	DDX54	Q8TDD1	881 aa	Known RBP	7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	CENPT	Q96BT3	561 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	GCC1	Q96CN9	775 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	ZNF396	Q96N95	335 aa	Predicted RBP	7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	TSEN34	Q9BSV6	310 aa	Known RBP	7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	TRIM6	Q9C030	488 aa	Predicted RBP	7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	IQCG	Q9H095	443 aa	Known RBP	7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	TMOD3	Q9NYL9	352 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	LIMD1	Q9UGP4	676 aa		7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	CIC	Q96RK0	1608 aa	Predicted RBP	7.81	□□□□□ -1.16
FBXO38-208	ENST00000504971	ITGB4	P16144	1822 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	GTPBP10	A4D1E9	387 aa	Known RBP	7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	NUTM2B	A6NNL0	878 aa	Predicted RBP	7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	NUTM2E	B1AL46	878 aa	Predicted RBP	7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	ORC4	O43929	436 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	TCEA3	O75764	348 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	ALDH1L1	O75891	902 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	DDX58	O95786	925 aa	Known RBP	7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	NOS2	P35228	1153 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	DDB1	Q16531	1140 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	QPCT	Q16769	361 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	MFSD4B	Q5TF39	518 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	NBPF14	Q5TI25	921 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	MYSM1	Q5VVJ2	828 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	KSR2	Q6VAB6	950 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	LRP10	Q7Z4F1	713 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	NUTM2A	Q8IVF1	878 aa	Predicted RBP	7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	SAMD14	Q8IZD0	417 aa	Predicted RBP	7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	GPR161	Q8N6U8	529 aa	Known RBP	7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	ANKRD44	Q8N8A2	993 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	VMP1	Q96GC9	406 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	MRFAP1L1	Q96HT8	127 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	NGLY1	Q96IV0	654 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	UIMC1	Q96RL1	719 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	TINF2	Q9BSI4	451 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	PDGFD	Q9GZP0	370 aa	Predicted RBP	7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	ZNF700	Q9H0M5	742 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	DEF6	Q9H4E7	631 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	CLIC5	Q9NZA1	410 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	CPSF2	Q9P2I0	782 aa	Known RBP	7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	DMGDH	Q9UI17	866 aa	Known RBP	7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	XPO7	Q9UIA9	1087 aa	Known RBP	7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	HDAC9	Q9UKV0	1011 aa		7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	TTF2	Q9UNY4	1162 aa	Known RBP	7.8	□□□□□ -1.16
FBXO38-208	ENST00000504971	SHTN1	A0MZ66	631 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	ANKRD18B	A2A2Z9	1011 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	CCDC66	A2RUB6	948 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971		F6X3S4	739 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	RRM1	P23921	792 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	STIP1	P31948	543 aa	Known RBP	7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	SUZ12	Q15022	739 aa	Known RBP	7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	C11orf91	Q3C1V1	193 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	ALF	Q53S48	1182 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	C11orf74	Q86VG3	221 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	TTC30A	Q86WT1	665 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	GIMAP1	Q8WWP7	306 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	DNAAF4	Q8WXU2	420 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	NANOS1	Q8WY41	292 aa	Known RBP	7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	GBP4	Q96PP9	640 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	SRCIN1	Q9C0H9	1055 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	CCSER2	Q9H7U1	834 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	PHAX	Q9H814	394 aa	Known RBP	7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	EVL	Q9UI08	416 aa	Predicted RBP	7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	ADCY9	O60503	1353 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	ZNF831	Q5JPB2	1677 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	THSD7A	Q9UPZ6	1657 aa		7.79	□□□□□ -1.16
FBXO38-208	ENST00000504971	PI4KAP2	A4QPH2	592 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	SOWAHD	A6NJG2	315 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	ENPP3	O14638	875 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	PPFIA2	O75334	1257 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	E2F6	O75461	281 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	NAT2	P11245	290 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	XRCC5	P13010	732 aa	Known RBP	7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	VCAM1	P19320	739 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	KIF5B	P33176	963 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	HSPA1L	P34931	641 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	BEND3	Q5T5X7	828 aa		7.78	□□□□□ -1.16
FBXO38-208	ENST00000504971	PDXDC1	Q6P996	788 aa		7.78	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms