RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 PPP4R3BQ5MIZ7 849 aa18.63■□□□□ 0.57
AFF1-205ENST00000504956 USP17L2Q6R6M4 530 aa18.63■□□□□ 0.57
AFF1-205ENST00000504956 SPICE1Q8N0Z3 855 aa18.63■□□□□ 0.57
AFF1-205ENST00000504956 TMEM47Q9BQJ4 181 aa18.63■□□□□ 0.57
AFF1-205ENST00000504956 GPHNQ9NQX3 736 aaPredicted RBP18.63■□□□□ 0.57
AFF1-205ENST00000504956 TMOD4Q9NZQ9 345 aa18.63■□□□□ 0.57
AFF1-205ENST00000504956 MTMR7Q9Y216 660 aa18.63■□□□□ 0.57
AFF1-205ENST00000504956 RLFQ13129 1914 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 PSMA5P28066 241 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 MAP2K2P36507 400 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 ANAPC15P60006 121 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 SART3Q15020 963 aaKnown RBP18.62■□□□□ 0.57
AFF1-205ENST00000504956 SEC23AQ15436 765 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 CCDC178Q5BJE1 867 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 TMEM67Q5HYA8 995 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 TREML2Q5T2D2 321 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 BLOC1S2Q6QNY1 142 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 RASGRP2Q7LDG7 609 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 MKL1Q969V6 931 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 PTPN18Q99952 460 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 VCPKMTQ9H867 229 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 SENP2Q9HC62 589 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 GOPCQ9HD26 462 aa18.62■□□□□ 0.57
AFF1-205ENST00000504956 ERICH2A1L162 156 aa18.61■□□□□ 0.57
AFF1-205ENST00000504956 TESPA1A2RU30 521 aaPredicted RBP18.61■□□□□ 0.57
AFF1-205ENST00000504956 IGF2BP3O00425 579 aaKnown RBP eCLIP18.61■□□□□ 0.57
AFF1-205ENST00000504956 TOP1P11387 765 aaKnown RBP18.61■□□□□ 0.57
AFF1-205ENST00000504956 WTAPQ15007 396 aa18.61■□□□□ 0.57
AFF1-205ENST00000504956 IFIT1BQ5T764 474 aaKnown RBP18.61■□□□□ 0.57
AFF1-205ENST00000504956 DHX32Q7L7V1 743 aaKnown RBP18.61■□□□□ 0.57
AFF1-205ENST00000504956 FASTKD5Q7L8L6 764 aaKnown RBP18.61■□□□□ 0.57
AFF1-205ENST00000504956 DGKHQ86XP1 1220 aa18.61■□□□□ 0.57
AFF1-205ENST00000504956 PROCA1Q8NCQ7 364 aaPredicted RBP18.61■□□□□ 0.57
AFF1-205ENST00000504956 UPF3BQ9BZI7 483 aaKnown RBP18.61■□□□□ 0.57
AFF1-205ENST00000504956 COL11A1P12107 1806 aaPredicted RBP18.61■□□□□ 0.57
AFF1-205ENST00000504956 BTBD19C9JJ37 291 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 HMGB1P09429 215 aaKnown RBP18.6■□□□□ 0.57
AFF1-205ENST00000504956 VCAM1P19320 739 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 RPS6KB1P23443 525 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 GPAT2Q6NUI2 795 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 FAM43AQ8N2R8 423 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 IGDCC4Q8TDY8 1250 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 C12orf42Q96LP6 360 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 TTC14Q96N46 770 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 F5H6K3 240 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 SH2B2O14492 632 aaPredicted RBP18.6■□□□□ 0.57
AFF1-205ENST00000504956 NDUFB10O96000 172 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 TM4SF4P48230 202 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 EXOSC10Q01780 885 aaKnown RBP18.6■□□□□ 0.57
AFF1-205ENST00000504956 KLRC3Q07444 240 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 IFNL1Q8IU54 200 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 TMEM87BQ96K49 555 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 KAT14Q9H8E8 782 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 LY9Q9HBG7 655 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 ZSWIM6Q9HCJ5 1215 aa18.6■□□□□ 0.57
AFF1-205ENST00000504956 RBM25P49756 843 aaKnown RBP18.59■□□□□ 0.57
AFF1-205ENST00000504956 INHBEP58166 350 aa18.59■□□□□ 0.57
AFF1-205ENST00000504956 RUFY3Q7L099 469 aa18.59■□□□□ 0.57
AFF1-205ENST00000504956 PNMA1Q8ND90 353 aa18.59■□□□□ 0.57
AFF1-205ENST00000504956 GMCL1P1Q8NEA9 526 aa18.59■□□□□ 0.57
AFF1-205ENST00000504956 ANKS1AQ92625 1134 aa18.59■□□□□ 0.57
AFF1-205ENST00000504956 NUP88Q99567 741 aaPredicted RBP18.59■□□□□ 0.57
AFF1-205ENST00000504956 TM6SF1Q9BZW5 370 aa18.59■□□□□ 0.57
AFF1-205ENST00000504956 AGTPBP1Q9UPW5 1226 aa18.59■□□□□ 0.57
AFF1-205ENST00000504956 MYH6P13533 1939 aa18.58■□□□□ 0.57
AFF1-205ENST00000504956 WDR19Q8NEZ3 1342 aa18.58■□□□□ 0.57
AFF1-205ENST00000504956 SLFN13Q68D06 897 aa18.58■□□□□ 0.57
AFF1-205ENST00000504956 ANKRD23Q86SG2 305 aa18.58■□□□□ 0.57
AFF1-205ENST00000504956 LPAR1Q92633 364 aa18.58■□□□□ 0.57
AFF1-205ENST00000504956 RPAP3Q9H6T3 665 aaPredicted RBP18.58■□□□□ 0.57
AFF1-205ENST00000504956 ISY1Q9ULR0 285 aaKnown RBP18.58■□□□□ 0.57
AFF1-205ENST00000504956 SYNPO2Q9UMS6 1093 aa18.58■□□□□ 0.57
AFF1-205ENST00000504956 CYP46A1Q9Y6A2 500 aa18.58■□□□□ 0.57
AFF1-205ENST00000504956 PDHXO00330 501 aa18.57■□□□□ 0.56
AFF1-205ENST00000504956 FGD1P98174 961 aa18.57■□□□□ 0.56
AFF1-205ENST00000504956 FAM83BQ5T0W9 1011 aa18.57■□□□□ 0.56
AFF1-205ENST00000504956 Q6ZUG5 572 aa18.57■□□□□ 0.56
AFF1-205ENST00000504956 IL17RAQ96F46 866 aa18.57■□□□□ 0.56
AFF1-205ENST00000504956 TBC1D32Q96NH3 1257 aa18.57■□□□□ 0.56
AFF1-205ENST00000504956 MTA3Q9BTC8 594 aa18.57■□□□□ 0.56
AFF1-205ENST00000504956 TANGO6Q9C0B7 1094 aa18.57■□□□□ 0.56
AFF1-205ENST00000504956 WDR46O15213 610 aaKnown RBP18.57■□□□□ 0.56
AFF1-205ENST00000504956 NFXL1Q6ZNB6 911 aa18.57■□□□□ 0.56
AFF1-205ENST00000504956 REM2Q8IYK8 340 aaPredicted RBP18.57■□□□□ 0.56
AFF1-205ENST00000504956 KIF2CQ99661 725 aa18.57■□□□□ 0.56
AFF1-205ENST00000504956 BAZ2BQ9UIF8 2168 aaKnown RBP18.56■□□□□ 0.56
AFF1-205ENST00000504956 A0A0G2JMZ2 1700 aa18.56■□□□□ 0.56
AFF1-205ENST00000504956 CCDC69A6NI79 296 aa18.55■□□□□ 0.56
AFF1-205ENST00000504956 CYP2C8P10632 490 aa18.55■□□□□ 0.56
AFF1-205ENST00000504956 PDHBP11177 359 aa18.55■□□□□ 0.56
AFF1-205ENST00000504956 LIFRP42702 1097 aa18.55■□□□□ 0.56
AFF1-205ENST00000504956 SLC1A4P43007 532 aa18.55■□□□□ 0.56
AFF1-205ENST00000504956 CCDC96Q2M329 555 aa18.55■□□□□ 0.56
AFF1-205ENST00000504956 OTUD7BQ6GQQ9 843 aa18.55■□□□□ 0.56
AFF1-205ENST00000504956 SAMD1Q6SPF0 538 aaPredicted RBP18.55■□□□□ 0.56
AFF1-205ENST00000504956 KCTD1Q719H9 257 aa18.55■□□□□ 0.56
AFF1-205ENST00000504956 RAB11FIP4Q86YS3 637 aa18.55■□□□□ 0.56
AFF1-205ENST00000504956 MYL10Q9BUA6 226 aa18.55■□□□□ 0.56
AFF1-205ENST00000504956 FRMPD2Q68DX3 1309 aaPredicted RBP18.55■□□□□ 0.56
AFF1-205ENST00000504956 USP17L15C9J2P7 530 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms