RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 C19orf81C9J6K1 198 aa15.89■□□□□ 0.13
DDX41-204ENST00000504807 GCLCP48506 637 aaPredicted RBP15.89■□□□□ 0.13
DDX41-204ENST00000504807 RAB3GAP1Q15042 981 aa15.89■□□□□ 0.13
DDX41-204ENST00000504807 ABCB5Q2M3G0 1257 aa15.89■□□□□ 0.13
DDX41-204ENST00000504807 CERKLQ49MI3 558 aaPredicted RBP15.89■□□□□ 0.13
DDX41-204ENST00000504807 TTC6Q86TZ1 520 aa15.89■□□□□ 0.13
DDX41-204ENST00000504807 C12orf42Q96LP6 360 aa15.89■□□□□ 0.13
DDX41-204ENST00000504807 CRNKL1Q9BZJ0 848 aaKnown RBP15.89■□□□□ 0.13
DDX41-204ENST00000504807 TMOD4Q9NZQ9 345 aa15.89■□□□□ 0.13
DDX41-204ENST00000504807 BAZ2AQ9UIF9 1905 aaKnown RBP15.89■□□□□ 0.13
DDX41-204ENST00000504807 MYH7P12883 1935 aa15.88■□□□□ 0.13
DDX41-204ENST00000504807 POLR3DP05423 398 aaPredicted RBP15.88■□□□□ 0.13
DDX41-204ENST00000504807 VCAM1P19320 739 aa15.88■□□□□ 0.13
DDX41-204ENST00000504807 CYP2B6P20813 491 aa15.88■□□□□ 0.13
DDX41-204ENST00000504807 IRX3P78415 501 aaPredicted RBP15.88■□□□□ 0.13
DDX41-204ENST00000504807 TMED8Q6PL24 325 aaPredicted RBP15.88■□□□□ 0.13
DDX41-204ENST00000504807 USP17L2Q6R6M4 530 aa15.88■□□□□ 0.13
DDX41-204ENST00000504807 CERS3Q8IU89 383 aa15.88■□□□□ 0.13
DDX41-204ENST00000504807 GINM1Q9NU53 330 aa15.88■□□□□ 0.13
DDX41-204ENST00000504807 PRKAG2Q9UGJ0 569 aa15.88■□□□□ 0.13
DDX41-204ENST00000504807 AKR1B1P15121 316 aa15.87■□□□□ 0.13
DDX41-204ENST00000504807 ATN1P54259 1190 aaPredicted RBP15.87■□□□□ 0.13
DDX41-204ENST00000504807 PABPC4Q13310 644 aaKnown RBP eCLIP15.87■□□□□ 0.13
DDX41-204ENST00000504807 MAP3K21Q5TCX8 1036 aa15.87■□□□□ 0.13
DDX41-204ENST00000504807 KIAA1683Q9H0B3 1180 aa15.87■□□□□ 0.13
DDX41-204ENST00000504807 RLFQ13129 1914 aa15.86■□□□□ 0.13
DDX41-204ENST00000504807 RRP1P56182 461 aaKnown RBP15.86■□□□□ 0.13
DDX41-204ENST00000504807 SMAD3P84022 425 aaKnown RBP15.86■□□□□ 0.13
DDX41-204ENST00000504807 UBE3CQ15386 1083 aa15.86■□□□□ 0.13
DDX41-204ENST00000504807 CATSPERGQ6ZRH7 1159 aa15.86■□□□□ 0.13
DDX41-204ENST00000504807 ADAMTS19Q8TE59 1207 aa15.86■□□□□ 0.13
DDX41-204ENST00000504807 USP6NLQ92738 828 aa15.86■□□□□ 0.13
DDX41-204ENST00000504807 PAGR1Q9BTK6 254 aa15.86■□□□□ 0.13
DDX41-204ENST00000504807 SENP6Q9GZR1 1112 aaPredicted RBP15.86■□□□□ 0.13
DDX41-204ENST00000504807 CHMP4BQ9H444 224 aaKnown RBP15.86■□□□□ 0.13
DDX41-204ENST00000504807 ECHDC1Q9NTX5 307 aa15.86■□□□□ 0.13
DDX41-204ENST00000504807 BTBD7Q9P203 1132 aa15.86■□□□□ 0.13
DDX41-204ENST00000504807 USP17L12C9JPN9 530 aa15.85■□□□□ 0.13
DDX41-204ENST00000504807 USP17L21D6R901 530 aa15.85■□□□□ 0.13
DDX41-204ENST00000504807 ERVK-9P63128 1117 aa15.85■□□□□ 0.13
DDX41-204ENST00000504807 ERVK-24P63145 666 aa15.85■□□□□ 0.13
DDX41-204ENST00000504807 CCL14Q16627 93 aa15.85■□□□□ 0.13
DDX41-204ENST00000504807 C12orf60Q5U649 245 aa15.85■□□□□ 0.13
DDX41-204ENST00000504807 LHX8Q68G74 356 aa15.85■□□□□ 0.13
DDX41-204ENST00000504807 GPRC5AQ8NFJ5 357 aa15.85■□□□□ 0.13
DDX41-204ENST00000504807 PPM1EQ8WY54 764 aa15.85■□□□□ 0.13
DDX41-204ENST00000504807 OSBP2Q969R2 916 aa15.85■□□□□ 0.13
DDX41-204ENST00000504807 CRBNQ96SW2 442 aa15.85■□□□□ 0.13
DDX41-204ENST00000504807 UHRF1Q96T88 793 aaPredicted RBP15.85■□□□□ 0.13
DDX41-204ENST00000504807 FEZ1Q99689 392 aa15.85■□□□□ 0.13
DDX41-204ENST00000504807 A0A0G2JMZ2 1700 aa15.85■□□□□ 0.13
DDX41-204ENST00000504807 SPDYE16A6NNV3 312 aaPredicted RBP15.84■□□□□ 0.13
DDX41-204ENST00000504807 CCND3P30281 292 aaPredicted RBP15.84■□□□□ 0.13
DDX41-204ENST00000504807 CACNB2Q08289 660 aaPredicted RBP15.84■□□□□ 0.13
DDX41-204ENST00000504807 GRIN2CQ14957 1233 aa15.84■□□□□ 0.13
DDX41-204ENST00000504807 CTR9Q6PD62 1173 aa15.84■□□□□ 0.13
DDX41-204ENST00000504807 PI4K2BQ8TCG2 481 aa15.84■□□□□ 0.13
DDX41-204ENST00000504807 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.84■□□□□ 0.13
DDX41-204ENST00000504807 RPAP3Q9H6T3 665 aaPredicted RBP15.84■□□□□ 0.13
DDX41-204ENST00000504807 PIEZO1Q92508 2521 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 USP17L15C9J2P7 530 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 USP17L13C9JLJ4 530 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 USP17L11C9JVI0 530 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 USP17L18D6R9N7 530 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 USP17L22D6RA61 530 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 USP17L17D6RBQ6 530 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 USP17L19D6RCP7 530 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 USP17L20D6RJB6 530 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 M0R2C6 588 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 MPHOSPH10O00566 681 aaKnown RBP15.83■□□□□ 0.12
DDX41-204ENST00000504807 CDK8P49336 464 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 USP17L24Q0WX57 530 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 MORN1Q5T089 497 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 GPR142Q7Z601 462 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 STRBPQ96SI9 672 aaKnown RBP15.83■□□□□ 0.12
DDX41-204ENST00000504807 EPB41L4AQ9HCS5 686 aaPredicted RBP15.83■□□□□ 0.12
DDX41-204ENST00000504807 ATP8A2Q9NTI2 1148 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 SLC4A4Q9Y6R1 1079 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 SALL3Q9BXA9 1300 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 NCOR1O75376 2440 aa15.83■□□□□ 0.12
DDX41-204ENST00000504807 GREB1LQ9C091 1923 aaPredicted RBP15.82■□□□□ 0.12
DDX41-204ENST00000504807 GSG1L2A8MUP6 293 aa15.82■□□□□ 0.12
DDX41-204ENST00000504807 ZKSCAN1P17029 563 aaPredicted RBP15.82■□□□□ 0.12
DDX41-204ENST00000504807 C16orf86Q6ZW13 317 aa15.82■□□□□ 0.12
DDX41-204ENST00000504807 KBTBD3Q8NAB2 608 aa15.82■□□□□ 0.12
DDX41-204ENST00000504807 ASB2Q96Q27 587 aa15.82■□□□□ 0.12
DDX41-204ENST00000504807 SEC62Q99442 399 aaKnown RBP15.82■□□□□ 0.12
DDX41-204ENST00000504807 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.82■□□□□ 0.122e-6■■■■□ 20.5
DDX41-204ENST00000504807 CABP5Q9NP86 173 aa15.82■□□□□ 0.12
DDX41-204ENST00000504807 PRDM5Q9NQX1 630 aaPredicted RBP15.82■□□□□ 0.12
DDX41-204ENST00000504807 FLRT1Q9NZU1 646 aa15.82■□□□□ 0.12
DDX41-204ENST00000504807 RTP1P59025 263 aa15.81■□□□□ 0.12
DDX41-204ENST00000504807 SPICE1Q8N0Z3 855 aa15.81■□□□□ 0.12
DDX41-204ENST00000504807 STK11IPQ8N1F8 1099 aa15.81■□□□□ 0.12
DDX41-204ENST00000504807 ATXN2LQ8WWM7 1075 aaKnown RBP15.81■□□□□ 0.12
DDX41-204ENST00000504807 BADQ92934 168 aa15.81■□□□□ 0.12
DDX41-204ENST00000504807 YTHDC1Q96MU7 727 aaKnown RBP15.81■□□□□ 0.12
DDX41-204ENST00000504807 SYNGAP1Q96PV0 1343 aa15.81■□□□□ 0.12
DDX41-204ENST00000504807 ATP11BQ9Y2G3 1177 aa15.81■□□□□ 0.12
DDX41-204ENST00000504807 PARP14Q460N5 1801 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms