RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MTFR1LQ9H019 292 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 DZANK1Q9NVP4 752 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 ABI2Q9NYB9 513 aaPredicted RBP6.24□□□□□ -1.41
NIPBL-204ENST00000504430 POLR3KQ9Y2Y1 108 aaPredicted RBP6.24□□□□□ -1.41
NIPBL-204ENST00000504430 CORINQ9Y5Q5 1042 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 ABHD14A-ACY1A0A1B0GW23 586 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 C19orf81C9J6K1 198 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 RBAK-RBAKDNI3L0D1 243 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 XYLBO75191 536 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 RC3H1Q5TC82 1133 aaKnown RBP6.24□□□□□ -1.41
NIPBL-204ENST00000504430 SYDE2Q5VT97 1194 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 PDE12Q6L8Q7 609 aaKnown RBP6.24□□□□□ -1.41
NIPBL-204ENST00000504430 KIAA1211LQ6NV74 962 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 CYP2U1Q7Z449 544 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 RHPN1Q8TCX5 695 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 NSUN6Q8TEA1 469 aaKnown RBP6.24□□□□□ -1.41
NIPBL-204ENST00000504430 GOLGA1Q92805 767 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 PPP1R14AQ96A00 147 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 CRB3Q9BUF7 120 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 ZNF395Q9H8N7 513 aaPredicted RBP6.24□□□□□ -1.41
NIPBL-204ENST00000504430 GPR52Q9Y2T5 361 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 TGFBR3LH3BV60 316 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 INPP5BP32019 993 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 HLTFQ14527 1009 aaKnown RBP eCLIP6.24□□□□□ -1.418e-9■■□□□ 11.9
NIPBL-204ENST00000504430 LLGL1Q15334 1064 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 ELF2Q15723 593 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 VARS2Q5ST30 1063 aaKnown RBP6.24□□□□□ -1.41
NIPBL-204ENST00000504430 FAM26EQ8N5C1 309 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 C7orf43Q8WVR3 580 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 KISS1RQ969F8 398 aaPredicted RBP6.24□□□□□ -1.41
NIPBL-204ENST00000504430 CNTNAP3BQ96NU0 1288 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 BARD1Q99728 777 aaKnown RBP6.24□□□□□ -1.41
NIPBL-204ENST00000504430 CNTNAP3Q9BZ76 1288 aa6.24□□□□□ -1.41
NIPBL-204ENST00000504430 FHDC1Q9C0D6 1143 aaPredicted RBP6.24□□□□□ -1.41
NIPBL-204ENST00000504430 LUC7LQ9NQ29 371 aaKnown RBP6.24□□□□□ -1.41
NIPBL-204ENST00000504430 TRIM64CA6NLI5 447 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 DNAJA2O60884 412 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 U2AF1L5P0DN76 240 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 TYRP1P17643 537 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 HIRAP54198 1017 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 U2AF1Q01081 240 aaKnown RBP eCLIP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 TBC1D1Q86TI0 1168 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 SLC7A14Q8TBB6 771 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 STK35Q8TDR2 534 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 GSX2Q9BZM3 304 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 RSAD1Q9HA92 442 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 FBXO10Q9UK96 956 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 ZNF891A8MT65 544 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 ZNF280AP59817 542 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 TBC1D10BQ4KMP7 808 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 TSHZ3Q63HK5 1081 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 MILR1Q7Z6M3 343 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 NXPE1Q8N323 547 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 TBC1D31Q96DN5 1066 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 TCF12Q99081 682 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 ZKSCAN3Q9BRR0 538 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 RUSC1Q9BVN2 902 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 NDOR1Q9UHB4 597 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 GPN3Q9UHW5 284 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 PCDHGB6Q9Y5F9 930 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 J3KRW8 73 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 TOR1BO14657 336 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 ASGR2P07307 311 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 CHKAP35790 457 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 CASP7P55210 303 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 BPIFB3P59826 476 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 ZNF267Q14586 743 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 CBARPQ8N350 705 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 ZNF496Q96IT1 587 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 XPO4Q9C0E2 1151 aaKnown RBP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 PRKRIP1Q9H875 184 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 FEZ2Q9UHY8 353 aaPredicted RBP6.23□□□□□ -1.41
NIPBL-204ENST00000504430 SYNPO2Q9UMS6 1093 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 HRH3Q9Y5N1 445 aa6.23□□□□□ -1.41
NIPBL-204ENST00000504430 SUSD5O60279 629 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 APPP05067 770 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 SLC5A1P13866 664 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 POLR2BP30876 1174 aaKnown RBP6.22□□□□□ -1.41
NIPBL-204ENST00000504430 PIK3CAP42336 1068 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 ZNF165P49910 485 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 APBA1Q02410 837 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 LAMC2Q13753 1193 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 SLC45A4Q5BKX6 768 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 HGSNATQ68CP4 663 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 SPOCD1Q6ZMY3 1216 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 RASGRP2Q7LDG7 609 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 SLC41A1Q8IVJ1 513 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 SYNPOQ8N3V7 929 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 CLIP3Q96DZ5 547 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 NECAB3Q96P71 396 aaPredicted RBP6.22□□□□□ -1.41
NIPBL-204ENST00000504430 CSRNP2Q9H175 543 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 MIR1-1HGQ9H1L0 117 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 LIN7BQ9HAP6 207 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 ACAD8Q9UKU7 415 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 DNAJC25-GNG10A0A024R161 153 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 SMTNL1A8MU46 457 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 EYA2O00167 538 aa6.22□□□□□ -1.41
NIPBL-204ENST00000504430 ELL2O00472 640 aaPredicted RBP6.22□□□□□ -1.41
NIPBL-204ENST00000504430 PRKD3O94806 890 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms