RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 G3V3G9 751 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 SMIM22K7EJ46 135 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 MARCKSP29966 332 aaPredicted RBP11.23□□□□□ -0.61
COL1A1-210ENST00000504289 PLCD1P51178 756 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 GABPAQ06546 454 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 SEMA3FQ13275 785 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 ORC2Q13416 577 aaPredicted RBP11.23□□□□□ -0.61
COL1A1-210ENST00000504289 DCAF8Q5TAQ9 597 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 ARL6IP4Q66PJ3 421 aaKnown RBP11.23□□□□□ -0.61
COL1A1-210ENST00000504289 KRBA2Q6ZNG9 492 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 LUZP1Q86V48 1076 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 PLA2G4DQ86XP0 818 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 TRIML1Q8N9V2 468 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 TEKT1Q969V4 418 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 EHD4Q9H223 541 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 CABP5Q9NP86 173 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 JAG2Q9Y219 1238 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 MYH1P12882 1939 aa11.23□□□□□ -0.61
COL1A1-210ENST00000504289 LAD1O00515 517 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 NEMFO60524 1076 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 NMT2O60551 498 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 ZNF75DP51815 510 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 TERF1P54274 439 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 NLRP5P59047 1200 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 NR5A1Q13285 461 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 NPY5RQ15761 445 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 SLC15A2Q16348 729 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 NT5DC1Q5TFE4 455 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.22□□□□□ -0.61
COL1A1-210ENST00000504289 C2CD5Q86YS7 1000 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 CCDC82Q8N4S0 544 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 DYNLL2Q96FJ2 89 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 CCDC17Q96LX7 622 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 ZDHHC15Q96MV8 337 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 GPR101Q96P66 508 aaPredicted RBP11.22□□□□□ -0.61
COL1A1-210ENST00000504289 TMEM47Q9BQJ4 181 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 VPS33BQ9H267 617 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 DHX36Q9H2U1 1008 aaKnown RBP11.22□□□□□ -0.61
COL1A1-210ENST00000504289 STK32BQ9NY57 414 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 VPS54Q9P1Q0 977 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 DACH1Q9UI36 760 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 MAD2L2Q9UI95 211 aa11.22□□□□□ -0.61
COL1A1-210ENST00000504289 SNED1Q8TER0 1413 aa11.21□□□□□ -0.61
COL1A1-210ENST00000504289 ESYT2A0FGR8 921 aa11.21□□□□□ -0.61
COL1A1-210ENST00000504289 HLA-DOAP06340 250 aa11.21□□□□□ -0.61
COL1A1-210ENST00000504289 ATP2C1P98194 919 aaPredicted RBP11.21□□□□□ -0.61
COL1A1-210ENST00000504289 BLIDQ8IZY5 108 aa11.21□□□□□ -0.61
COL1A1-210ENST00000504289 CMTR1Q8N1G2 835 aaKnown RBP11.21□□□□□ -0.61
COL1A1-210ENST00000504289 CNNM3Q8NE01 707 aa11.21□□□□□ -0.61
COL1A1-210ENST00000504289 OXER1Q8TDS5 423 aa11.21□□□□□ -0.61
COL1A1-210ENST00000504289 TRIM5Q9C035 493 aa11.21□□□□□ -0.61
COL1A1-210ENST00000504289 BARHL2Q9NY43 387 aa11.21□□□□□ -0.61
COL1A1-210ENST00000504289 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.21□□□□□ -0.61
COL1A1-210ENST00000504289 PCDHA4Q9UN74 947 aa11.21□□□□□ -0.61
COL1A1-210ENST00000504289 TTF2Q9UNY4 1162 aaKnown RBP11.21□□□□□ -0.61
COL1A1-210ENST00000504289 PCDHB6Q9Y5E3 794 aa11.21□□□□□ -0.61
COL1A1-210ENST00000504289 COL11A2P13942 1736 aaPredicted RBP11.21□□□□□ -0.62
COL1A1-210ENST00000504289 IGKV6D-41A0A0C4DH26 115 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 UBE2Q2LH0YL09 131 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 RIMBP2O15034 1052 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 OFD1O75665 1012 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 PARP1P09874 1014 aaKnown RBP11.2□□□□□ -0.62
COL1A1-210ENST00000504289 MDM2Q00987 491 aaPredicted RBP11.2□□□□□ -0.62
COL1A1-210ENST00000504289 ASPRV1Q53RT3 343 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 TTC38Q5R3I4 469 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 C11orf57Q6ZUT1 292 aaPredicted RBP11.2□□□□□ -0.62
COL1A1-210ENST00000504289 DHX40Q8IX18 779 aaKnown RBP11.2□□□□□ -0.62
COL1A1-210ENST00000504289 CERS5Q8N5B7 392 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 SLC16A10Q8TF71 515 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 C7orf43Q8WVR3 580 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 CAMKK2Q96RR4 588 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 IDI2Q9BXS1 227 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 SAP30BPQ9UHR5 308 aaKnown RBP11.2□□□□□ -0.62
COL1A1-210ENST00000504289 SERPINB13Q9UIV8 391 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 SERPINA10Q9UK55 444 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 STX8Q9UNK0 236 aa11.2□□□□□ -0.62
COL1A1-210ENST00000504289 COL2A1P02458 1487 aaPredicted RBP11.19□□□□□ -0.62
COL1A1-210ENST00000504289 USP17L3A6NCW0 530 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 USP17L4A6NCW7 530 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 M0R2N6 131 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 AP5Z1O43299 807 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 SMC2O95347 1197 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 SLFN14P0C7P3 912 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 SNHG28P0DPA3 235 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 GNA11P29992 359 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 LONP1P36776 959 aaKnown RBP11.19□□□□□ -0.62
COL1A1-210ENST00000504289 PRPHP41219 470 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 PLCB2Q00722 1185 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 EVX2Q03828 476 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 OLFM4Q6UX06 510 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 USP17L1Q7RTZ2 530 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 CCDC125Q86Z20 511 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 TEX2Q8IWB9 1127 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 MLKLQ8NB16 471 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 SPATA20Q8TB22 786 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 PIBF1Q8WXW3 757 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 ZNF622Q969S3 477 aaKnown RBP eCLIP11.19□□□□□ -0.62
COL1A1-210ENST00000504289 SHISA4Q96DD7 197 aa11.19□□□□□ -0.62
COL1A1-210ENST00000504289 RRP36Q96EU6 259 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms