RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 GYPCP04921 128 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 BCAMP50895 628 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 KARSQ15046 597 aaKnown RBP16.97■□□□□ 0.31
SNF8-203ENST00000504000 LONRF2Q1L5Z9 754 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 MUM1L1Q5H9M0 696 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 VPS54Q9P1Q0 977 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 DUOX1Q9NRD9 1551 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 MAGEB6P1A0A0J9YX57 407 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 CTAGE9A4FU28 777 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 CYP7A1P22680 504 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 OAS2P29728 719 aaKnown RBP16.97■□□□□ 0.31
SNF8-203ENST00000504000 AFMP43652 599 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 NPY5RQ15761 445 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 TTC38Q5R3I4 469 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 SUSD4Q5VX71 490 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 IQCA1Q86XH1 822 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 CDC5LQ99459 802 aaKnown RBP16.97■□□□□ 0.31
SNF8-203ENST00000504000 RIOK1Q9BRS2 568 aaKnown RBP16.97■□□□□ 0.31
SNF8-203ENST00000504000 RMND1Q9NWS8 449 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
SNF8-203ENST00000504000 ATP2B1P20020 1258 aa16.96■□□□□ 0.31
SNF8-203ENST00000504000 CASP14P31944 242 aa16.96■□□□□ 0.31
SNF8-203ENST00000504000 NT5C2P49902 561 aa16.96■□□□□ 0.31
SNF8-203ENST00000504000 PIP4K2BP78356 416 aa16.96■□□□□ 0.31
SNF8-203ENST00000504000 WHAMMP3Q1A5X7 153 aa16.96■□□□□ 0.31
SNF8-203ENST00000504000 IFIT1BQ5T764 474 aaKnown RBP16.96■□□□□ 0.31
SNF8-203ENST00000504000 ARL6IP4Q66PJ3 421 aaKnown RBP16.96■□□□□ 0.31
SNF8-203ENST00000504000 ANKRD20A12PQ8NF67 263 aa16.96■□□□□ 0.31
SNF8-203ENST00000504000 EXOC4Q96A65 974 aa16.96■□□□□ 0.31
SNF8-203ENST00000504000 EPC1Q9H2F5 836 aa16.96■□□□□ 0.31
SNF8-203ENST00000504000 LAMB2P55268 1798 aa16.96■□□□□ 0.31
SNF8-203ENST00000504000 GTPBP6O43824 516 aaPredicted RBP16.95■□□□□ 0.3
SNF8-203ENST00000504000 ERLIN1O75477 346 aa16.95■□□□□ 0.3
SNF8-203ENST00000504000 EARS2Q5JPH6 523 aaKnown RBP16.95■□□□□ 0.3
SNF8-203ENST00000504000 CYP26C1Q6V0L0 522 aa16.95■□□□□ 0.3
SNF8-203ENST00000504000 TMTC3Q6ZXV5 915 aa16.95■□□□□ 0.3
SNF8-203ENST00000504000 MIGA1Q8NAN2 632 aa16.95■□□□□ 0.3
SNF8-203ENST00000504000 ANKZF1Q9H8Y5 726 aa16.95■□□□□ 0.3
SNF8-203ENST00000504000 LZTFL1Q9NQ48 299 aa16.95■□□□□ 0.3
SNF8-203ENST00000504000 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
SNF8-203ENST00000504000 V9GY48 417 aaPredicted RBP16.95■□□□□ 0.3
SNF8-203ENST00000504000 TULP2O00295 520 aa16.95■□□□□ 0.3
SNF8-203ENST00000504000 KRT31Q15323 416 aa16.95■□□□□ 0.3
SNF8-203ENST00000504000 BEND6Q5SZJ8 279 aaPredicted RBP16.95■□□□□ 0.3
SNF8-203ENST00000504000 KLHL10Q6JEL2 608 aa16.95■□□□□ 0.3
SNF8-203ENST00000504000 PDXDC2PQ6P474 469 aa16.95■□□□□ 0.3
SNF8-203ENST00000504000 IRX2Q9BZI1 471 aaPredicted RBP16.95■□□□□ 0.3
SNF8-203ENST00000504000 GBP3Q9H0R5 595 aa16.95■□□□□ 0.3
SNF8-203ENST00000504000 ABHD10Q9NUJ1 306 aa16.95■□□□□ 0.3
SNF8-203ENST00000504000 XDHP47989 1333 aa16.94■□□□□ 0.3
SNF8-203ENST00000504000 FAM205CA6NFA0 338 aa16.94■□□□□ 0.3
SNF8-203ENST00000504000 ERICH4A6NGS2 130 aa16.94■□□□□ 0.3
SNF8-203ENST00000504000 MINDY4BA8MYZ0 360 aa16.94■□□□□ 0.3
SNF8-203ENST00000504000 FXR1P51114 621 aaKnown RBP eCLIP16.94■□□□□ 0.3
SNF8-203ENST00000504000 PTGDRQ13258 359 aa16.94■□□□□ 0.3
SNF8-203ENST00000504000 ZNF658Q5TYW1 1059 aaPredicted RBP16.94■□□□□ 0.3
SNF8-203ENST00000504000 HDXQ7Z353 690 aa16.94■□□□□ 0.3
SNF8-203ENST00000504000 RREB1Q92766 1687 aa16.94■□□□□ 0.3
SNF8-203ENST00000504000 SNAP23O00161 211 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 N4BP3O15049 544 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 POLR3GO15318 223 aaPredicted RBP16.93■□□□□ 0.3
SNF8-203ENST00000504000 ORC4O43929 436 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 GTF2E1P29083 439 aaPredicted RBP16.93■□□□□ 0.3
SNF8-203ENST00000504000 STX17P56962 302 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 CHRNDQ07001 517 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 KIF4BQ2VIQ3 1234 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 ZNF569Q5MCW4 686 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 ADGRA1Q86SQ6 560 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 SDR42E1Q8WUS8 393 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 NAPGQ99747 312 aaPredicted RBP16.93■□□□□ 0.3
SNF8-203ENST00000504000 H7C1D1 291 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 MYL1P05976 194 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 LONP1P36776 959 aaKnown RBP16.93■□□□□ 0.3
SNF8-203ENST00000504000 COPB1P53618 953 aaKnown RBP16.93■□□□□ 0.3
SNF8-203ENST00000504000 HNRNPH2P55795 449 aaKnown RBP16.93■□□□□ 0.3
SNF8-203ENST00000504000 PAK1Q13153 545 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 UBE4AQ14139 1066 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 TCP11X2Q5H9J9 407 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 ZNF662Q6ZS27 426 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 L1RE1Q9UN81 338 aa16.93■□□□□ 0.3
SNF8-203ENST00000504000 CACNA1SQ13698 1873 aa16.92■□□□□ 0.3
SNF8-203ENST00000504000 CNTNAP5Q8WYK1 1306 aa16.92■□□□□ 0.3
SNF8-203ENST00000504000 A0A1W2PQC6 194 aa16.92■□□□□ 0.3
SNF8-203ENST00000504000 PLEKHA8P1O95397 391 aa16.92■□□□□ 0.3
SNF8-203ENST00000504000 ZNF174Q15697 407 aa16.92■□□□□ 0.3
SNF8-203ENST00000504000 CPLX3Q8WVH0 158 aa16.92■□□□□ 0.3
SNF8-203ENST00000504000 CTNND2Q9UQB3 1225 aa16.92■□□□□ 0.3
SNF8-203ENST00000504000 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNF8-203ENST00000504000 MYH2Q9UKX2 1941 aa16.92■□□□□ 0.3
SNF8-203ENST00000504000 PHLPP1O60346 1717 aa16.91■□□□□ 0.3
SNF8-203ENST00000504000 EIF3JO75822 258 aaKnown RBP16.91■□□□□ 0.3
SNF8-203ENST00000504000 NTSR2O95665 410 aa16.91■□□□□ 0.3
SNF8-203ENST00000504000 ARHGAP25P42331 645 aa16.91■□□□□ 0.3
SNF8-203ENST00000504000 ERVK-24P63145 666 aa16.91■□□□□ 0.3
SNF8-203ENST00000504000 RRAGBQ5VZM2 374 aa16.91■□□□□ 0.3
SNF8-203ENST00000504000 INTS5Q6P9B9 1019 aaKnown RBP16.91■□□□□ 0.3
SNF8-203ENST00000504000 CTCFLQ8NI51 663 aaPredicted RBP16.91■□□□□ 0.3
SNF8-203ENST00000504000 TSPYL1Q9H0U9 437 aa16.91■□□□□ 0.3
SNF8-203ENST00000504000 PDS5AQ29RF7 1337 aaKnown RBP16.91■□□□□ 0.3
SNF8-203ENST00000504000 CICQ96RK0 1608 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms