RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 OSBPP22059 807 aa13.12□□□□□ -0.31
VCAN-205ENST00000503923 NOVP48745 357 aa13.12□□□□□ -0.31
VCAN-205ENST00000503923 TAF1CQ15572 869 aaPredicted RBP13.12□□□□□ -0.31
VCAN-205ENST00000503923 STOX1Q6ZVD7 989 aa13.12□□□□□ -0.31
VCAN-205ENST00000503923 TTC14Q96N46 770 aa13.12□□□□□ -0.31
VCAN-205ENST00000503923 PARK7Q99497 189 aaKnown RBP13.12□□□□□ -0.31
VCAN-205ENST00000503923 ZFYVE28Q9HCC9 887 aa13.12□□□□□ -0.31
VCAN-205ENST00000503923 ZSWIM5Q9P217 1185 aa13.12□□□□□ -0.31
VCAN-205ENST00000503923 TAF6LQ9Y6J9 622 aa13.12□□□□□ -0.31
VCAN-205ENST00000503923 VCAM1P19320 739 aa13.11□□□□□ -0.31
VCAN-205ENST00000503923 HOXA7P31268 230 aaPredicted RBP13.11□□□□□ -0.31
VCAN-205ENST00000503923 HSPA4P34932 840 aa13.11□□□□□ -0.31
VCAN-205ENST00000503923 CRHR2Q13324 411 aa13.11□□□□□ -0.31
VCAN-205ENST00000503923 TSGA10IPQ3SY00 556 aa13.11□□□□□ -0.31
VCAN-205ENST00000503923 NKX2-3Q8TAU0 364 aa13.11□□□□□ -0.31
VCAN-205ENST00000503923 UBAC1Q9BSL1 405 aa13.11□□□□□ -0.31
VCAN-205ENST00000503923 USP26Q9BXU7 913 aa13.11□□□□□ -0.31
VCAN-205ENST00000503923 USP17L15C9J2P7 530 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 USP17L13C9JLJ4 530 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 USP17L11C9JVI0 530 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 USP17L18D6R9N7 530 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 USP17L22D6RA61 530 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 USP17L17D6RBQ6 530 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 USP17L19D6RCP7 530 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 USP17L20D6RJB6 530 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 F5H6K3 240 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 WDR46O15213 610 aaKnown RBP13.1□□□□□ -0.31
VCAN-205ENST00000503923 FOXN1O15353 648 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 RAD21O60216 631 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 TBC1D8O95759 1140 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 TOP1P11387 765 aaKnown RBP13.1□□□□□ -0.31
VCAN-205ENST00000503923 MCCP23508 829 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 CTCFP49711 727 aaPredicted RBP13.1□□□□□ -0.31
VCAN-205ENST00000503923 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
VCAN-205ENST00000503923 KLRC3Q07444 240 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 USP17L24Q0WX57 530 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 KRT32Q14532 448 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 SPICE1Q8N0Z3 855 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 LRRC47Q8N1G4 583 aaKnown RBP13.1□□□□□ -0.31
VCAN-205ENST00000503923 GMCL1P1Q8NEA9 526 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 KCNB2Q92953 911 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 ZSCAN10Q96SZ4 725 aaPredicted RBP13.1□□□□□ -0.31
VCAN-205ENST00000503923 ZKSCAN3Q9BRR0 538 aa13.1□□□□□ -0.31
VCAN-205ENST00000503923 RPAP3Q9H6T3 665 aaPredicted RBP13.1□□□□□ -0.31
VCAN-205ENST00000503923 TLR2O60603 784 aa13.09□□□□□ -0.31
VCAN-205ENST00000503923 NDUFB10O96000 172 aa13.09□□□□□ -0.31
VCAN-205ENST00000503923 CYP2C8P10632 490 aa13.09□□□□□ -0.31
VCAN-205ENST00000503923 SART3Q15020 963 aaKnown RBP13.09□□□□□ -0.31
VCAN-205ENST00000503923 C8orf34Q49A92 452 aa13.09□□□□□ -0.31
VCAN-205ENST00000503923 NOM1Q5C9Z4 860 aaKnown RBP13.09□□□□□ -0.31
VCAN-205ENST00000503923 KIAA1755Q5JYT7 1200 aa13.09□□□□□ -0.31
VCAN-205ENST00000503923 CATSPERGQ6ZRH7 1159 aa13.09□□□□□ -0.31
VCAN-205ENST00000503923 CYB5R4Q7L1T6 521 aa13.09□□□□□ -0.31
VCAN-205ENST00000503923 MB21D2Q8IYB1 491 aaPredicted RBP13.09□□□□□ -0.31
VCAN-205ENST00000503923 RASEFQ8IZ41 740 aa13.09□□□□□ -0.31
VCAN-205ENST00000503923 SMCR8Q8TEV9 937 aaPredicted RBP13.09□□□□□ -0.31
VCAN-205ENST00000503923 ANKS1AQ92625 1134 aa13.09□□□□□ -0.31
VCAN-205ENST00000503923 TMEM47Q9BQJ4 181 aa13.09□□□□□ -0.31
VCAN-205ENST00000503923 ASCC2Q9H1I8 757 aaPredicted RBP13.09□□□□□ -0.31
VCAN-205ENST00000503923 TSKSQ9UJT2 592 aa13.09□□□□□ -0.31
VCAN-205ENST00000503923 TNKSO95271 1327 aa13.09□□□□□ -0.31
VCAN-205ENST00000503923 ERICH2A1L162 156 aa13.08□□□□□ -0.32
VCAN-205ENST00000503923 HSPA8P11142 646 aaKnown RBP13.08□□□□□ -0.32
VCAN-205ENST00000503923 MCM5P33992 734 aa13.08□□□□□ -0.32
VCAN-205ENST00000503923 SLFN13Q68D06 897 aa13.08□□□□□ -0.32
VCAN-205ENST00000503923 RCSD1Q6JBY9 416 aa13.08□□□□□ -0.32
VCAN-205ENST00000503923 ENAHQ8N8S7 591 aaPredicted RBP13.08□□□□□ -0.32
VCAN-205ENST00000503923 GTF3C2Q8WUA4 911 aaPredicted RBP13.08□□□□□ -0.32
VCAN-205ENST00000503923 NEK1Q96PY6 1258 aa13.08□□□□□ -0.32
VCAN-205ENST00000503923 MTA3Q9BTC8 594 aa13.08□□□□□ -0.32
VCAN-205ENST00000503923 TANGO6Q9C0B7 1094 aa13.08□□□□□ -0.32
VCAN-205ENST00000503923 R3HDMLQ9H3Y0 253 aa13.08□□□□□ -0.32
VCAN-205ENST00000503923 GPR25O00155 361 aa13.07□□□□□ -0.32
VCAN-205ENST00000503923 IFIT3O14879 490 aaKnown RBP13.07□□□□□ -0.32
VCAN-205ENST00000503923 HMGB1P09429 215 aaKnown RBP13.07□□□□□ -0.32
VCAN-205ENST00000503923 GCLCP48506 637 aaPredicted RBP13.07□□□□□ -0.32
VCAN-205ENST00000503923 SEC23AQ15436 765 aa13.07□□□□□ -0.32
VCAN-205ENST00000503923 ADCK5Q3MIX3 580 aa13.07□□□□□ -0.32
VCAN-205ENST00000503923 FAM83BQ5T0W9 1011 aa13.07□□□□□ -0.32
VCAN-205ENST00000503923 IFIT1BQ5T764 474 aaKnown RBP13.07□□□□□ -0.32
VCAN-205ENST00000503923 CHST3Q7LGC8 479 aa13.07□□□□□ -0.32
VCAN-205ENST00000503923 GMCL1Q96IK5 515 aa13.07□□□□□ -0.32
VCAN-205ENST00000503923 P2RX7Q99572 595 aaKnown RBP13.07□□□□□ -0.32
VCAN-205ENST00000503923 KAT14Q9H8E8 782 aa13.07□□□□□ -0.32
VCAN-205ENST00000503923 SNX14Q9Y5W7 946 aa13.07□□□□□ -0.32
VCAN-205ENST00000503923 ADGRA2Q96PE1 1338 aa13.07□□□□□ -0.32
VCAN-205ENST00000503923 PRC1O43663 620 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 FLOT1O75955 427 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 BMP3P12645 472 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 SLC1A4P43007 532 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 LBX1P52954 281 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 ANTXR2P58335 489 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 HERVK_113P62684 666 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 COG2Q14746 738 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 WTAPQ15007 396 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 C17orf99Q6UX52 265 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 DCAF4Q8WV16 495 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 TMEM87BQ96K49 555 aa13.06□□□□□ -0.32
VCAN-205ENST00000503923 NUP88Q99567 741 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms