RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 ADGRB3O60242 1522 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 CEP128Q6ZU80 1094 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 TRMT44Q8IYL2 757 aaKnown RBP17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 GPR161Q8N6U8 529 aaKnown RBP17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 RPGRIP1Q96KN7 1286 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 CSRNP2Q9H175 543 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 ZBTB21Q9ULJ3 1066 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 LEMD3Q9Y2U8 911 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 ZNF804BA4D1E1 1349 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 SPOPO43791 374 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 CMA1P23946 247 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 FAM196AQ6ZSG2 479 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 BRINP3Q76B58 766 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 SNX29Q8TEQ0 813 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 SLF1Q9BQI6 1058 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 GAS2L3Q86XJ1 694 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 CNKSR1Q969H4 720 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 UTP11Q9Y3A2 253 aaKnown RBP17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 TCP10Q12799 353 aa17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 ZMYM1Q5SVZ6 1142 aa17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 NUCKS1Q9H1E3 243 aaKnown RBP17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 GOLGA6BA6NDN3 693 aa17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 PHKA1P46020 1223 aa17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 GPR162Q16538 588 aa17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 FAM47AQ5JRC9 791 aa17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 REXO1Q8N1G1 1221 aaKnown RBP17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 KIAA1524Q8TCG1 905 aa17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 RUFY4Q6ZNE9 571 aa17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 CROCCP2Q86T23 111 aa17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 NOSTRINQ8IVI9 506 aa17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 PUS3Q9BZE2 481 aaKnown RBP17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 SWAP70Q9UH65 585 aa17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 PTCH1Q13635 1447 aa17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 LSG1Q9H089 658 aaKnown RBP17.96■□□□□ 0.47
HMGXB3-202ENST00000503427 XDHP47989 1333 aa17.96■□□□□ 0.46
HMGXB3-202ENST00000503427 HPDP32754 393 aaPredicted RBP17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 CABP7Q86V35 215 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 CCDC63Q8NA47 563 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 ZMYM6O95789 1325 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 TNFAIP1Q13829 316 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 MCTP2Q6DN12 878 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 SPATA24Q86W54 205 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 UBL4BQ8N7F7 174 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 TRIML1Q8N9V2 468 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 CERKQ8TCT0 537 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 VPS54Q9P1Q0 977 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 MED23Q9ULK4 1368 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 PRAMEF22A3QJZ6 481 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 ZBED4O75132 1171 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 PAK2Q13177 524 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 FANCBQ8NB91 859 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 BRD3Q15059 726 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 HERC4Q5GLZ8 1057 aaPredicted RBP17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 WDR44Q5JSH3 913 aa17.95■□□□□ 0.46
HMGXB3-202ENST00000503427 SMTNP53814 917 aa17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 CFAP221Q4G0U5 840 aa17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 NLRP10Q86W26 655 aa17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 ATP8A2Q9NTI2 1148 aa17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 ADCY9O60503 1353 aa17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 LMTK2Q8IWU2 1503 aa17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 CDC42BPBQ9Y5S2 1711 aa17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 OAS2P29728 719 aaKnown RBP17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 PPFIA1Q13136 1202 aa17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 C2CD5Q86YS7 1000 aa17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 TNKSO95271 1327 aa17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 LRRC8AQ8IWT6 810 aa17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 FAM212AQ96EL1 285 aa17.94■□□□□ 0.46
HMGXB3-202ENST00000503427 VIMP08670 466 aaKnown RBP17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 ALDH3A1P30838 453 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 ADKP55263 362 aaKnown RBP17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 CALCRLQ16602 461 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 WHAMMP3Q1A5X7 153 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 TMEM87AQ8NBN3 555 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 CHURC1Q8WUH1 139 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 MAP3K9P80192 1104 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 SDR42E1Q8WUS8 393 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 FNBP1Q96RU3 617 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 FLOT1O75955 427 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 ADORA1P30542 326 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 LACTBP83111 547 aaPredicted RBP17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 CLUL1Q15846 466 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 LONRF3Q496Y0 759 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 PIGBQ92521 554 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 BLZF1Q9H2G9 400 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 SETBP1Q9Y6X0 1596 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 DDAH1O94760 285 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 RNASE9P60153 205 aaKnown RBP17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 KLHL30Q0D2K2 578 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 ZYXQ15942 572 aaKnown RBP17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 APBB1IPQ7Z5R6 666 aaPredicted RBP17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 OR8K1Q8NGG5 319 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 PCDHA7Q9UN72 937 aa17.93■□□□□ 0.46
HMGXB3-202ENST00000503427 ETF1P62495 437 aaKnown RBP17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 SP4Q02446 784 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 STAMQ92783 540 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 IFT74Q96LB3 600 aa17.92■□□□□ 0.46
HMGXB3-202ENST00000503427 TULP4Q9NRJ4 1543 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms