RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 LSG1Q9H089 658 aaKnown RBP5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 MED4Q9NPJ6 270 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 HAUS2Q9NVX0 235 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 WWC3Q9ULE0 1092 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 C6orf229H3BNL8 230 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 TCP1P17987 556 aaKnown RBP5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 NCBP1Q09161 790 aaKnown RBP5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 PPFIA1Q13136 1202 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 SLC9C1Q4G0N8 1177 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 GPATCH4Q5T3I0 446 aaKnown RBP5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 PPP1R18Q6NYC8 613 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 SPATA5Q8NB90 893 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 BBOF1Q8ND07 529 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 IL17REQ8NFR9 667 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 SMARCC2Q8TAQ2 1214 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 DNAJC25Q9H1X3 360 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 ANTXR1Q9H6X2 564 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 RIC8AQ9NPQ8 531 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 MTMR6Q9Y217 621 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 ZNF202O95125 648 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 FANCCQ00597 558 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 XPCQ01831 940 aaPredicted RBP5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 POSTNQ15063 836 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 KLHL10Q6JEL2 608 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 PPP4R3CPQ6ZMV5 832 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 ARHGAP27Q6ZUM4 889 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 ARMC9Q7Z3E5 817 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 IFT20Q8IY31 132 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 SYCP3Q8IZU3 236 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 FBXO18Q8NFZ0 1043 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 TRIM58Q8NG06 486 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 DHTKD1Q96HY7 919 aaPredicted RBP5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 MXD3Q9BW11 206 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 SUGT1Q9Y2Z0 365 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 SYNRGQ9UMZ2 1314 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 ROBO2Q9HCK4 1378 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 SLX4Q8IY92 1834 aa5.31□□□□□ -1.56
NDFIP1-202ENST00000503388 EFCAB8A8MWE9 144 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 EIF3CLB5ME19 914 aaKnown RBP5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 E7EWF7 191 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 ONECUT3O60422 494 aaPredicted RBP5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 FLOT1O75955 427 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 IDEP14735 1019 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 ASPRV1Q53RT3 343 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 TRAPPC3LQ5T215 181 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 NOSTRINQ8IVI9 506 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 DIS3L2Q8IYB7 885 aaKnown RBP5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 MAGEB6Q8N7X4 407 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 CHURC1Q8WUH1 139 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 DYDC1Q8WWB3 177 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 EIF3CQ99613 913 aaKnown RBP5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 NCAPGQ9BPX3 1015 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 PLA2G12BQ9BX93 195 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 EDEM3Q9BZQ6 932 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 USH1CQ9Y6N9 552 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 FAM13AO94988 1023 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 MBD4O95243 580 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 IFNAR1P17181 557 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 SMTNP53814 917 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 EVCP57679 992 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 SLC39A14Q15043 492 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 CCDC14Q49A88 953 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 SPATA1Q5VX52 437 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 KRT40Q6A162 431 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 GGA1Q9UJY5 639 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 FRMD4BQ9Y2L6 1034 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 COL15A1P39059 1388 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 PALLDQ8WX93 1383 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 DOCK2Q92608 1830 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 CFAP65Q6ZU64 1925 aaKnown RBP5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 PPFIA4O75335 1185 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 TAF5LO75529 589 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 FDX1P10109 184 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 GSPT1P15170 499 aaKnown RBP5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 ARHGAP25P42331 645 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 PAK2Q13177 524 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 TNFAIP1Q13829 316 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 SLFNL1Q499Z3 407 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 G2E3Q7L622 706 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 MAATS1Q7Z4T9 603 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 NECAB1Q8N987 351 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 FBXO41Q8TF61 875 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 NOX5Q96PH1 765 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 DBNDD2Q9BQY9 259 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 ZRANB1Q9UGI0 708 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 TPCN1Q9ULQ1 816 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 DIS3Q9Y2L1 958 aaKnown RBP5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 FAM177BA6PVY3 158 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 EBAG9O00559 213 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 FOXP2O15409 715 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 PDE8BO95263 885 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 BCRP11274 1271 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 GAP43P17677 238 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 GPTP24298 496 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 ADCY7P51828 1080 aa5.3□□□□□ -1.56
NDFIP1-202ENST00000503388 AOC3Q16853 763 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms