RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 USP17L11C9JVI0 530 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 USP17L18D6R9N7 530 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 USP17L22D6RA61 530 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 USP17L17D6RBQ6 530 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 USP17L19D6RCP7 530 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 USP17L20D6RJB6 530 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 WDR46O15213 610 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 FKTNO75072 461 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 BCRP11274 1271 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 EEF2P13639 858 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 VCAM1P19320 739 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 OSBPP22059 807 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 LBX1P52954 281 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 USP17L24Q0WX57 530 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 ARHGEF6Q15052 776 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 FAM110CQ1W6H9 321 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 CCDC84Q86UT8 332 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 ACER1Q8TDN7 264 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 CEP95Q96GE4 821 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 KRT23Q9C075 422 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 GOPCQ9HD26 462 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 TBC1D8O95759 1140 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 CYP21A2P08686 494 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 TFAP4Q01664 338 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 SP3Q02447 781 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 CTDSPL2Q05D32 466 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 NECTIN1Q15223 517 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 PKN2Q16513 984 aaKnown RBP12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 TSGA10IPQ3SY00 556 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 TREML2Q5T2D2 321 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 RCSD1Q6JBY9 416 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 GADL1Q6ZQY3 521 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 CATSPERGQ6ZRH7 1159 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 DGKHQ86XP1 1220 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 TBC1D10CQ8IV04 446 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 ZNF296Q8WUU4 475 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 ANKS1AQ92625 1134 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 ERO1AQ96HE7 468 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 ASCC2Q9H1I8 757 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 MORF4L1Q9UBU8 362 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 TACC3Q9Y6A5 838 aa12.68□□□□□ -0.38
UBE2D3-212ENST00000502563 PLA2G6O60733 806 aa12.67□□□□□ -0.38
UBE2D3-212ENST00000502563 PRDM1O75626 825 aa12.67□□□□□ -0.38
UBE2D3-212ENST00000502563 REC8O95072 547 aa12.67□□□□□ -0.38
UBE2D3-212ENST00000502563 PTH1RQ03431 593 aa12.67□□□□□ -0.38
UBE2D3-212ENST00000502563 SKAP1Q86WV1 359 aa12.67□□□□□ -0.38
UBE2D3-212ENST00000502563 IQCA1Q86XH1 822 aa12.67□□□□□ -0.38
UBE2D3-212ENST00000502563 MB21D1Q8N884 522 aa12.67□□□□□ -0.38
UBE2D3-212ENST00000502563 GMCL1Q96IK5 515 aa12.67□□□□□ -0.38
UBE2D3-212ENST00000502563 IL17RBQ9NRM6 502 aa12.67□□□□□ -0.38
UBE2D3-212ENST00000502563 HOXC10Q9NYD6 342 aa12.67□□□□□ -0.38
UBE2D3-212ENST00000502563 NEDD4P46934 1319 aa12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 A0A0G2JMZ2 1700 aa12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 RANBP6O60518 1105 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 FDX1P10109 184 aa12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 PRMT2P55345 433 aa12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 HAND2P61296 217 aa12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 HERVK_113P62684 666 aa12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 IRX3P78415 501 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 LACTBP83111 547 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 RNF20Q5VTR2 975 aa12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 SPDYE1Q8NFV5 336 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 SMCR8Q8TEV9 937 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 R3HDMLQ9H3Y0 253 aa12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 ADAMTS5Q9UNA0 930 aa12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 RBM8AQ9Y5S9 174 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 MYH4Q9Y623 1939 aa12.66□□□□□ -0.38
UBE2D3-212ENST00000502563 RLFQ13129 1914 aa12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 F5H6K3 240 aa12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 CYP2C8P10632 490 aa12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 TOP1P11387 765 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 KLRC3Q07444 240 aa12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 TRDNQ13061 729 aa12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 COG2Q14746 738 aa12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 FAM47AQ5JRC9 791 aa12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 CTU1Q7Z7A3 348 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 KCNB2Q92953 911 aa12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 RPAP3Q9H6T3 665 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 ANO2Q9NQ90 1003 aa12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 RABGAP1Q9Y3P9 1069 aa12.65□□□□□ -0.38
UBE2D3-212ENST00000502563 PARP14Q460N5 1801 aa12.65□□□□□ -0.39
UBE2D3-212ENST00000502563 NDUFB10O96000 172 aa12.64□□□□□ -0.39
UBE2D3-212ENST00000502563 SNHG28P0DPA3 235 aa12.64□□□□□ -0.39
UBE2D3-212ENST00000502563 NCOA7Q8NI08 942 aa12.64□□□□□ -0.39
UBE2D3-212ENST00000502563 CLIP2Q9UDT6 1046 aa12.64□□□□□ -0.39
UBE2D3-212ENST00000502563 TSKSQ9UJT2 592 aa12.64□□□□□ -0.39
UBE2D3-212ENST00000502563 WDR19Q8NEZ3 1342 aa12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 E7EWF7 191 aa12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 ATP2A1O14983 1001 aa12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 KDM4AO75164 1064 aa12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 KRT32Q14532 448 aa12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 KIF22Q14807 665 aa12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 KIAA1755Q5JYT7 1200 aa12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 CLEC10AQ8IUN9 316 aa12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 ZSCAN10Q96SZ4 725 aaPredicted RBP12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 P2RX7Q99572 595 aaKnown RBP12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 TOMM22Q9NS69 142 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms