RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 FAM26EQ8N5C1 309 aa4.4□□□□□ -1.71
SUB1-202ENST00000502453 C3orf58Q8NDZ4 430 aa4.4□□□□□ -1.71
SUB1-202ENST00000502453 HS3ST6Q96QI5 342 aa4.4□□□□□ -1.71
SUB1-202ENST00000502453 SERINC2Q96SA4 455 aa4.4□□□□□ -1.71
SUB1-202ENST00000502453 SLC26A6Q9BXS9 759 aa4.4□□□□□ -1.71
SUB1-202ENST00000502453 CDC23Q9UJX2 597 aa4.4□□□□□ -1.71
SUB1-202ENST00000502453 JMJD7P0C870 316 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 TYRP1P17643 537 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 IREB2P48200 963 aaKnown RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 ZNF165P49910 485 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 PSMC1P62191 440 aaKnown RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 SFSWAPQ12872 951 aaKnown RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 PDCD2Q16342 344 aaPredicted RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 ANKRD13BQ86YJ7 626 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 TAB3Q8N5C8 712 aaPredicted RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 MGARPQ8TDB4 240 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 CCDC138Q96M89 665 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 KIAA1586Q9HCI6 787 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 ACAD8Q9UKU7 415 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 RABL2BQ9UNT1 228 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 SERTM1A2A2V5 107 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 EREGO14944 169 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 BRINP1O60477 761 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 CD4P01730 458 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 U2AF1L5P0DN76 240 aaPredicted RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 U2AF1Q01081 240 aaKnown RBP eCLIP4.39□□□□□ -1.71
SUB1-202ENST00000502453 LAMC2Q13753 1193 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 PCBP2Q15366 365 aaKnown RBP eCLIP4.39□□□□□ -1.71
SUB1-202ENST00000502453 FAM98CQ17RN3 349 aaKnown RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 GJC2Q5T442 439 aaPredicted RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 GPR158Q5T848 1215 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 VPS53Q5VIR6 699 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 HGSNATQ68CP4 663 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 TTBK2Q6IQ55 1244 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 ZNF449Q6P9G9 518 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 ATXN2LQ8WWM7 1075 aaKnown RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 ZNF496Q96IT1 587 aaPredicted RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 MYLK2Q9H1R3 596 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 ANTXR1Q9H6X2 564 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 PRKRIP1Q9H875 184 aaPredicted RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 TPCN1Q9ULQ1 816 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 CEP131Q9UPN4 1083 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 ANKRD6Q9Y2G4 727 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 XPOTO43592 962 aaKnown RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 GRIN3BO60391 1043 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 IFT88Q13099 833 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 MFSD4BQ5TF39 518 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 SLC41A1Q8IVJ1 513 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 SCUBE3Q8IX30 993 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 CMTR1Q8N1G2 835 aaKnown RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 LRRC47Q8N1G4 583 aaKnown RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 NKAPQ8N5F7 415 aaKnown RBP4.39□□□□□ -1.71
SUB1-202ENST00000502453 NAXEQ8NCW5 288 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 SNX21Q969T3 373 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 TBCBQ99426 244 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 LATS2Q9NRM7 1088 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 CABP1Q9NZU7 370 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 NDOR1Q9UHB4 597 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 TMX2Q9Y320 296 aa4.39□□□□□ -1.71
SUB1-202ENST00000502453 H3BRJ5 948 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 ERVH48-1M5A8F1 160 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 RLBP1P12271 317 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 TFE3P19532 575 aaPredicted RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 UBA7P41226 1012 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 TSPAN7P41732 249 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 SSR1P43307 286 aaKnown RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 SATB1Q01826 763 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 SLC10A6Q3KNW5 377 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 GPATCH4Q5T3I0 446 aaKnown RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 FAM47EQ6ZV65 393 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 BPHLQ86WA6 291 aaPredicted RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 SPATA5Q8NB90 893 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 GIMAP8Q8ND71 665 aaPredicted RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 BAP1Q92560 729 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 XPO4Q9C0E2 1151 aaKnown RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 ALG13Q9NP73 1137 aaKnown RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 IFT80Q9P2H3 777 aaPredicted RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 RRN3P2A6NIE6 340 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 M0R2C6 588 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 MPHOSPH10O00566 681 aaKnown RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 PLD2O14939 933 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 AP1G1O43747 822 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 PQBP1O60828 265 aaKnown RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 TMCC2O75069 709 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 CLUL1Q15846 466 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 SLC45A4Q5BKX6 768 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 GGT6Q6P531 493 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 PGM2L1Q6PCE3 622 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 VHLLQ6RSH7 139 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 TBC1D1Q86TI0 1168 aaPredicted RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 DDX1Q92499 740 aaKnown RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 ESYT1Q9BSJ8 1104 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 PHACTR1Q9C0D0 580 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 SMYD2Q9NRG4 433 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 STRN4Q9NRL3 753 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 TMEM63CQ9P1W3 806 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 PPP1R9AQ9ULJ8 1098 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 TNPO3Q9Y5L0 923 aaKnown RBP4.38□□□□□ -1.71
SUB1-202ENST00000502453 WASHC2AQ641Q2 1341 aa4.38□□□□□ -1.71
SUB1-202ENST00000502453 TRIM64A6NGJ6 449 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms