RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 LIMCH1Q9UPQ0 1083 aa22.88■■□□□ 1.25
LINC01550-201ENST00000499006 RBM19Q9Y4C8 960 aaKnown RBP22.88■■□□□ 1.25
LINC01550-201ENST00000499006 SLC12A7Q9Y666 1083 aa22.88■■□□□ 1.25
LINC01550-201ENST00000499006 TLL2Q9Y6L7 1015 aa22.88■■□□□ 1.25
LINC01550-201ENST00000499006 PARP14Q460N5 1801 aa22.88■■□□□ 1.25
LINC01550-201ENST00000499006 SPP2Q13103 211 aa22.87■■□□□ 1.25
LINC01550-201ENST00000499006 GMCL1P1Q8NEA9 526 aa22.87■■□□□ 1.25
LINC01550-201ENST00000499006 OPTNQ96CV9 577 aa22.87■■□□□ 1.25
LINC01550-201ENST00000499006 KIAA1683Q9H0B3 1180 aa22.87■■□□□ 1.25
LINC01550-201ENST00000499006 SH2D4AQ9H788 454 aa22.87■■□□□ 1.25
LINC01550-201ENST00000499006 USP17L10C9JJH3 530 aa22.86■■□□□ 1.25
LINC01550-201ENST00000499006 DDAH1O94760 285 aa22.86■■□□□ 1.25
LINC01550-201ENST00000499006 PDIA3P30101 505 aaKnown RBP22.86■■□□□ 1.25
LINC01550-201ENST00000499006 RCAN1P53805 252 aa22.86■■□□□ 1.25
LINC01550-201ENST00000499006 PPIL2Q13356 520 aa22.86■■□□□ 1.25
LINC01550-201ENST00000499006 NOL8Q76FK4 1167 aaKnown RBP22.86■■□□□ 1.25
LINC01550-201ENST00000499006 CATIPQ7Z7H3 387 aa22.86■■□□□ 1.25
LINC01550-201ENST00000499006 HPS5Q9UPZ3 1129 aa22.86■■□□□ 1.25
LINC01550-201ENST00000499006 NID2Q14112 1375 aa22.86■■□□□ 1.25
LINC01550-201ENST00000499006 LARGE1O95461 756 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 SNHG28P0DPA3 235 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 GJA5P36382 358 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 BACE1P56817 501 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 ME3Q16798 604 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 OTUD5Q96G74 571 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 MYL10Q9BUA6 226 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 VCPKMTQ9H867 229 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 MYH6P13533 1939 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 TRIM75PA6NK02 468 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 F5H6K3 240 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 IRF6O14896 467 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 ZBTB43O43298 467 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 KLRC3Q07444 240 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 MTMR2Q13614 643 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 KIAA1755Q5JYT7 1200 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 MAP3K14Q99558 947 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 GOPCQ9HD26 462 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.85■■□□□ 1.25
LINC01550-201ENST00000499006 KCNH4Q9UQ05 1017 aa22.85■■□□□ 1.25
LINC01550-201ENST00000499006 GOLGA8BA8MQT2 603 aa22.84■■□□□ 1.25
LINC01550-201ENST00000499006 C19orf81C9J6K1 198 aa22.84■■□□□ 1.25
LINC01550-201ENST00000499006 CALM1P0DP23 149 aa22.84■■□□□ 1.25
LINC01550-201ENST00000499006 CALM2P0DP24 149 aa22.84■■□□□ 1.25
LINC01550-201ENST00000499006 CALM3P0DP25 149 aa22.84■■□□□ 1.25
LINC01550-201ENST00000499006 PDHBP11177 359 aa22.84■■□□□ 1.25
LINC01550-201ENST00000499006 SYNE3Q6ZMZ3 975 aa22.84■■□□□ 1.25
LINC01550-201ENST00000499006 RASGRP2Q7LDG7 609 aa22.84■■□□□ 1.25
LINC01550-201ENST00000499006 MICU3Q86XE3 530 aa22.84■■□□□ 1.25
LINC01550-201ENST00000499006 WNK4Q96J92 1243 aa22.84■■□□□ 1.25
LINC01550-201ENST00000499006 HHIPL1Q96JK4 782 aa22.84■■□□□ 1.25
LINC01550-201ENST00000499006 ZSCAN31Q96LW9 406 aaPredicted RBP22.84■■□□□ 1.25
LINC01550-201ENST00000499006 FEZ1Q99689 392 aa22.84■■□□□ 1.25
LINC01550-201ENST00000499006 CXCL11O14625 94 aa22.83■■□□□ 1.25
LINC01550-201ENST00000499006 PFKFB2O60825 505 aa22.83■■□□□ 1.25
LINC01550-201ENST00000499006 NDUFB10O96000 172 aa22.83■■□□□ 1.25
LINC01550-201ENST00000499006 RXRAP19793 462 aa22.83■■□□□ 1.25
LINC01550-201ENST00000499006 APLP1P51693 650 aa22.83■■□□□ 1.25
LINC01550-201ENST00000499006 USP14P54578 494 aa22.83■■□□□ 1.25
LINC01550-201ENST00000499006 SH3D19Q5HYK7 790 aa22.83■■□□□ 1.25
LINC01550-201ENST00000499006 RAB11FIP4Q86YS3 637 aa22.83■■□□□ 1.25
LINC01550-201ENST00000499006 GMCL1Q96IK5 515 aa22.83■■□□□ 1.25
LINC01550-201ENST00000499006 TMX3Q96JJ7 454 aa22.83■■□□□ 1.25
LINC01550-201ENST00000499006 SH2B1Q9NRF2 756 aaPredicted RBP22.83■■□□□ 1.25
LINC01550-201ENST00000499006 EMILIN3Q9NT22 766 aa22.83■■□□□ 1.25
LINC01550-201ENST00000499006 RLFQ13129 1914 aa22.83■■□□□ 1.24
LINC01550-201ENST00000499006 BAZ2BQ9UIF8 2168 aaKnown RBP22.82■■□□□ 1.24
LINC01550-201ENST00000499006 GRM4Q14833 912 aa22.82■■□□□ 1.24
LINC01550-201ENST00000499006 ZYXQ15942 572 aaKnown RBP22.82■■□□□ 1.24
LINC01550-201ENST00000499006 SLFN13Q68D06 897 aa22.82■■□□□ 1.24
LINC01550-201ENST00000499006 RGMBQ6NW40 437 aa22.82■■□□□ 1.24
LINC01550-201ENST00000499006 USP17L2Q6R6M4 530 aa22.82■■□□□ 1.24
LINC01550-201ENST00000499006 FANCBQ8NB91 859 aa22.82■■□□□ 1.24
LINC01550-201ENST00000499006 NUP133Q8WUM0 1156 aa22.82■■□□□ 1.24
LINC01550-201ENST00000499006 LPAR1Q92633 364 aa22.82■■□□□ 1.24
LINC01550-201ENST00000499006 C12orf42Q96LP6 360 aa22.82■■□□□ 1.24
LINC01550-201ENST00000499006 FAM217BQ9NTX9 383 aaPredicted RBP22.82■■□□□ 1.24
LINC01550-201ENST00000499006 NAP1L2Q9ULW6 460 aaPredicted RBP22.82■■□□□ 1.24
LINC01550-201ENST00000499006 A0A0G2JLL6 359 aaPredicted RBP22.81■■□□□ 1.24
LINC01550-201ENST00000499006 K7ELQ4 463 aaPredicted RBP22.81■■□□□ 1.24
LINC01550-201ENST00000499006 ZBTB48P10074 688 aaPredicted RBP22.81■■□□□ 1.24
LINC01550-201ENST00000499006 METAP2P50579 478 aaKnown RBP eCLIP22.81■■□□□ 1.24
LINC01550-201ENST00000499006 DGKZQ13574 1117 aa22.81■■□□□ 1.24
LINC01550-201ENST00000499006 SPRYD7Q5W111 196 aa22.81■■□□□ 1.24
LINC01550-201ENST00000499006 PRRT2Q7Z6L0 340 aaPredicted RBP22.81■■□□□ 1.24
LINC01550-201ENST00000499006 DCAF4Q8WV16 495 aa22.81■■□□□ 1.24
LINC01550-201ENST00000499006 CREBZFQ9NS37 354 aa22.81■■□□□ 1.24
LINC01550-201ENST00000499006 MAD2L2Q9UI95 211 aa22.81■■□□□ 1.24
LINC01550-201ENST00000499006 MTMR7Q9Y216 660 aa22.81■■□□□ 1.24
LINC01550-201ENST00000499006 PALM3A6NDB9 673 aaPredicted RBP22.8■■□□□ 1.24
LINC01550-201ENST00000499006 GOLGA8AA7E2F4 631 aa22.8■■□□□ 1.24
LINC01550-201ENST00000499006 ZNF157P51786 506 aaPredicted RBP22.8■■□□□ 1.24
LINC01550-201ENST00000499006 HMGCS2P54868 508 aa22.8■■□□□ 1.24
LINC01550-201ENST00000499006 ST3GAL1Q11201 340 aa22.8■■□□□ 1.24
LINC01550-201ENST00000499006 SCRN1Q12765 414 aa22.8■■□□□ 1.24
LINC01550-201ENST00000499006 STK3Q13188 491 aa22.8■■□□□ 1.24
LINC01550-201ENST00000499006 PPP2R5BQ15173 497 aa22.8■■□□□ 1.24
LINC01550-201ENST00000499006 RASAL3Q86YV0 1011 aa22.8■■□□□ 1.24
LINC01550-201ENST00000499006 HSCBQ8IWL3 235 aa22.8■■□□□ 1.24
LINC01550-201ENST00000499006 CCDC144CPQ8IYA2 1237 aa22.8■■□□□ 1.24
LINC01550-201ENST00000499006 SPICE1Q8N0Z3 855 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms