RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 USP17L24Q0WX57 530 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 NBR1Q14596 966 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 DPF3Q92784 378 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 PUS7LQ9H0K6 701 aaKnown RBP20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 ECHDC1Q9NTX5 307 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 FARP2O94887 1054 aaPredicted RBP20.29■□□□□ 0.84
AP004609.1-201ENST00000498872 HMGCRP04035 888 aa20.29■□□□□ 0.84
AP004609.1-201ENST00000498872 UBE3CQ15386 1083 aa20.29■□□□□ 0.84
AP004609.1-201ENST00000498872 CATSPERGQ6ZRH7 1159 aa20.29■□□□□ 0.84
AP004609.1-201ENST00000498872 UBE2Q1Q7Z7E8 422 aa20.29■□□□□ 0.84
AP004609.1-201ENST00000498872 TRIB2Q92519 343 aa20.29■□□□□ 0.84
AP004609.1-201ENST00000498872 RPAP3Q9H6T3 665 aaPredicted RBP20.29■□□□□ 0.84
AP004609.1-201ENST00000498872 PAK6Q9NQU5 681 aaPredicted RBP20.29■□□□□ 0.84
AP004609.1-201ENST00000498872 ATP8A2Q9NTI2 1148 aa20.29■□□□□ 0.84
AP004609.1-201ENST00000498872 SLC4A4Q9Y6R1 1079 aa20.29■□□□□ 0.84
AP004609.1-201ENST00000498872 USP17L12C9JPN9 530 aa20.28■□□□□ 0.84
AP004609.1-201ENST00000498872 USP17L21D6R901 530 aa20.28■□□□□ 0.84
AP004609.1-201ENST00000498872 H0YGN5 161 aa20.28■□□□□ 0.84
AP004609.1-201ENST00000498872 RILPL2Q969X0 211 aa20.28■□□□□ 0.84
AP004609.1-201ENST00000498872 NUDT12Q9BQG2 462 aa20.28■□□□□ 0.84
AP004609.1-201ENST00000498872 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.28■□□□□ 0.84
AP004609.1-201ENST00000498872 CEP290O15078 2479 aa20.27■□□□□ 0.84
AP004609.1-201ENST00000498872 CNMDO75829 334 aa20.27■□□□□ 0.84
AP004609.1-201ENST00000498872 CHMLP26374 656 aa20.27■□□□□ 0.84
AP004609.1-201ENST00000498872 MAPK4P31152 587 aa20.27■□□□□ 0.84
AP004609.1-201ENST00000498872 GPR142Q7Z601 462 aa20.27■□□□□ 0.84
AP004609.1-201ENST00000498872 GPATCH3Q96I76 525 aa20.27■□□□□ 0.84
AP004609.1-201ENST00000498872 ESYT1Q9BSJ8 1104 aa20.27■□□□□ 0.84
AP004609.1-201ENST00000498872 CWC22Q9HCG8 908 aaKnown RBP20.27■□□□□ 0.84
AP004609.1-201ENST00000498872 GLRX3O76003 335 aaKnown RBP20.27■□□□□ 0.83
AP004609.1-201ENST00000498872 AKR1B1P15121 316 aa20.27■□□□□ 0.83
AP004609.1-201ENST00000498872 HABP4Q5JVS0 413 aaKnown RBP20.27■□□□□ 0.83
AP004609.1-201ENST00000498872 C12orf60Q5U649 245 aa20.27■□□□□ 0.83
AP004609.1-201ENST00000498872 WDR78Q5VTH9 848 aa20.27■□□□□ 0.83
AP004609.1-201ENST00000498872 ZSCAN25Q6NSZ9 544 aa20.27■□□□□ 0.83
AP004609.1-201ENST00000498872 SWAP70Q9UH65 585 aa20.27■□□□□ 0.83
AP004609.1-201ENST00000498872 KIAA1755Q5JYT7 1200 aa20.26■□□□□ 0.83
AP004609.1-201ENST00000498872 TMEM179Q6ZVK1 233 aa20.26■□□□□ 0.83
AP004609.1-201ENST00000498872 GTF3C2Q8WUA4 911 aaPredicted RBP20.26■□□□□ 0.83
AP004609.1-201ENST00000498872 BTBD7Q9P203 1132 aa20.26■□□□□ 0.83
AP004609.1-201ENST00000498872 RABGAP1Q9Y3P9 1069 aa20.26■□□□□ 0.83
AP004609.1-201ENST00000498872 CDK8P49336 464 aa20.25■□□□□ 0.83
AP004609.1-201ENST00000498872 CCL14Q16627 93 aa20.25■□□□□ 0.83
AP004609.1-201ENST00000498872 PLEKHH3Q7Z736 793 aa20.25■□□□□ 0.83
AP004609.1-201ENST00000498872 AMOTL1Q8IY63 956 aa20.25■□□□□ 0.83
AP004609.1-201ENST00000498872 STK11IPQ8N1F8 1099 aa20.25■□□□□ 0.83
AP004609.1-201ENST00000498872 SOCS4Q8WXH5 440 aa20.25■□□□□ 0.83
AP004609.1-201ENST00000498872 TANGO6Q9C0B7 1094 aa20.25■□□□□ 0.83
AP004609.1-201ENST00000498872 HMX1Q9NP08 348 aaPredicted RBP20.25■□□□□ 0.83
AP004609.1-201ENST00000498872 COLQQ9Y215 455 aaPredicted RBP20.25■□□□□ 0.83
AP004609.1-201ENST00000498872 RLFQ13129 1914 aa20.25■□□□□ 0.83
AP004609.1-201ENST00000498872 SPDYE16A6NNV3 312 aaPredicted RBP20.24■□□□□ 0.83
AP004609.1-201ENST00000498872 RABEP1Q15276 862 aa20.24■□□□□ 0.83
AP004609.1-201ENST00000498872 CTR9Q6PD62 1173 aa20.24■□□□□ 0.83
AP004609.1-201ENST00000498872 SIAH1Q8IUQ4 282 aa20.24■□□□□ 0.83
AP004609.1-201ENST00000498872 SPICE1Q8N0Z3 855 aa20.24■□□□□ 0.83
AP004609.1-201ENST00000498872 KBTBD3Q8NAB2 608 aa20.24■□□□□ 0.83
AP004609.1-201ENST00000498872 DIS3LQ8TF46 1054 aaKnown RBP20.24■□□□□ 0.83
AP004609.1-201ENST00000498872 HTATIP2Q9BUP3 242 aa20.24■□□□□ 0.83
AP004609.1-201ENST00000498872 RPTORQ8N122 1335 aa20.24■□□□□ 0.83
AP004609.1-201ENST00000498872 ALPK3Q96L96 1907 aa20.24■□□□□ 0.83
AP004609.1-201ENST00000498872 PRKAR2AP13861 404 aaKnown RBP20.24■□□□□ 0.83
AP004609.1-201ENST00000498872 PAWRQ96IZ0 340 aaKnown RBP20.24■□□□□ 0.83
AP004609.1-201ENST00000498872 CRISPLD2Q9H0B8 497 aa20.24■□□□□ 0.83
AP004609.1-201ENST00000498872 ICA1Q05084 483 aa20.23■□□□□ 0.83
AP004609.1-201ENST00000498872 MORN1Q5T089 497 aa20.23■□□□□ 0.83
AP004609.1-201ENST00000498872 SAMD1Q6SPF0 538 aaPredicted RBP20.23■□□□□ 0.83
AP004609.1-201ENST00000498872 C16orf86Q6ZW13 317 aa20.23■□□□□ 0.83
AP004609.1-201ENST00000498872 USP6NLQ92738 828 aa20.23■□□□□ 0.83
AP004609.1-201ENST00000498872 OSBP2Q969R2 916 aa20.23■□□□□ 0.83
AP004609.1-201ENST00000498872 STRBPQ96SI9 672 aaKnown RBP20.23■□□□□ 0.83
AP004609.1-201ENST00000498872 SLKQ9H2G2 1235 aaPredicted RBP20.23■□□□□ 0.83
AP004609.1-201ENST00000498872 PARP14Q460N5 1801 aa20.22■□□□□ 0.83
AP004609.1-201ENST00000498872 XRCC5P13010 732 aaKnown RBP20.22■□□□□ 0.83
AP004609.1-201ENST00000498872 ZKSCAN1P17029 563 aaPredicted RBP20.22■□□□□ 0.83
AP004609.1-201ENST00000498872 RGS2P41220 211 aa20.22■□□□□ 0.83
AP004609.1-201ENST00000498872 CCNA1P78396 465 aa20.22■□□□□ 0.83
AP004609.1-201ENST00000498872 ATP2B2Q01814 1243 aa20.22■□□□□ 0.83
AP004609.1-201ENST00000498872 ARHGEF10LQ9HCE6 1279 aa20.22■□□□□ 0.83
AP004609.1-201ENST00000498872 A0A0G2JMZ2 1700 aa20.22■□□□□ 0.83
AP004609.1-201ENST00000498872 EPB41L2O43491 1005 aaKnown RBP20.21■□□□□ 0.83
AP004609.1-201ENST00000498872 CACNB2Q08289 660 aaPredicted RBP20.21■□□□□ 0.83
AP004609.1-201ENST00000498872 LBX2Q6XYB7 198 aa20.21■□□□□ 0.83
AP004609.1-201ENST00000498872 COL11A1P12107 1806 aaPredicted RBP20.21■□□□□ 0.83
AP004609.1-201ENST00000498872 GSG1L2A8MUP6 293 aa20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 RNF113AO15541 343 aaKnown RBP20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 MAP2K5Q13163 448 aa20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 COG2Q14746 738 aa20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 MAP3K21Q5TCX8 1036 aa20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 CHRDL2Q6WN34 429 aa20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 APPBP2Q92624 585 aa20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 CCDC17Q96LX7 622 aa20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 APBA2Q99767 749 aa20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 ARPP21Q9UBL0 812 aaPredicted RBP20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 TMX2Q9Y320 296 aa20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 RANBP2P49792 3224 aaKnown RBP20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 MINDY4BA8MYZ0 360 aa20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 M0R2C6 588 aa20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 EEF2P13639 858 aaKnown RBP20.2■□□□□ 0.82
AP004609.1-201ENST00000498872 CCND3P30281 292 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms