RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 GPR39O43194 453 aa10.92□□□□□ -0.66
SNX13-212ENST00000498463 AKAP10O43572 662 aa10.92□□□□□ -0.66
SNX13-212ENST00000498463 DHCR24Q15392 516 aa10.92□□□□□ -0.66
SNX13-212ENST00000498463 VWA5B2Q8N398 1253 aa10.92□□□□□ -0.66
SNX13-212ENST00000498463 KLHDC7BQ96G42 594 aa10.92□□□□□ -0.66
SNX13-212ENST00000498463 ZIM2Q9NZV7 527 aa10.92□□□□□ -0.66
SNX13-212ENST00000498463 NDOR1Q9UHB4 597 aa10.92□□□□□ -0.66
SNX13-212ENST00000498463 TNPO3Q9Y5L0 923 aaKnown RBP10.92□□□□□ -0.66
SNX13-212ENST00000498463 AOC2O75106 756 aa10.91□□□□□ -0.66
SNX13-212ENST00000498463 CAND2O75155 1236 aa10.91□□□□□ -0.66
SNX13-212ENST00000498463 CLEC3AO75596 197 aa10.91□□□□□ -0.66
SNX13-212ENST00000498463 SLFN14P0C7P3 912 aa10.91□□□□□ -0.66
SNX13-212ENST00000498463 MX2P20592 715 aa10.91□□□□□ -0.66
SNX13-212ENST00000498463 NLRP12P59046 1061 aa10.91□□□□□ -0.66
SNX13-212ENST00000498463 ITKQ08881 620 aa10.91□□□□□ -0.66
SNX13-212ENST00000498463 STAT4Q14765 748 aa10.91□□□□□ -0.66
SNX13-212ENST00000498463 PCBP1Q15365 356 aaKnown RBP eCLIP10.91□□□□□ -0.66
SNX13-212ENST00000498463 RNF219Q5W0B1 726 aaPredicted RBP10.91□□□□□ -0.66
SNX13-212ENST00000498463 DCAF15Q66K64 600 aa10.91□□□□□ -0.66
SNX13-212ENST00000498463 SLC6A19Q695T7 634 aa10.91□□□□□ -0.66
SNX13-212ENST00000498463 DPH2Q9BQC3 489 aaPredicted RBP10.91□□□□□ -0.66
SNX13-212ENST00000498463 SLC52A2Q9HAB3 445 aa10.91□□□□□ -0.66
SNX13-212ENST00000498463 FANCGO15287 622 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 NPTXRO95502 500 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 ATF3P18847 181 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 NTF4P34130 210 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 NEK4P51957 841 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 ZNF460Q14592 562 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 SEPT7Q16181 437 aaKnown RBP10.9□□□□□ -0.66
SNX13-212ENST00000498463 HID1Q8IV36 788 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 CCDC144CPQ8IYA2 1237 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 MYO1HQ8N1T3 1032 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 GSTCDQ8NEC7 633 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 CCDC74BQ96LY2 380 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 GBP3Q9H0R5 595 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 FBRSQ9HAH7 460 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 AAASQ9NRG9 546 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 LRRC4BQ9NT99 713 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 STARD13Q9Y3M8 1113 aa10.9□□□□□ -0.66
SNX13-212ENST00000498463 TTBK1Q5TCY1 1321 aaPredicted RBP10.89□□□□□ -0.67
SNX13-212ENST00000498463 TM4SF5O14894 197 aa10.89□□□□□ -0.67
SNX13-212ENST00000498463 PLIN1O60240 522 aa10.89□□□□□ -0.67
SNX13-212ENST00000498463 GBP1P32455 592 aa10.89□□□□□ -0.67
SNX13-212ENST00000498463 PIN1Q13526 163 aaPredicted RBP10.89□□□□□ -0.67
SNX13-212ENST00000498463 SV2AQ7L0J3 742 aa10.89□□□□□ -0.67
SNX13-212ENST00000498463 FGD2Q7Z6J4 655 aa10.89□□□□□ -0.67
SNX13-212ENST00000498463 CHPFQ8IZ52 775 aa10.89□□□□□ -0.67
SNX13-212ENST00000498463 KLHL23Q8NBE8 558 aa10.89□□□□□ -0.67
SNX13-212ENST00000498463 BVESQ8NE79 360 aa10.89□□□□□ -0.67
SNX13-212ENST00000498463 GDF2Q9UK05 429 aaPredicted RBP10.89□□□□□ -0.67
SNX13-212ENST00000498463 OPA1O60313 960 aa10.88□□□□□ -0.67
SNX13-212ENST00000498463 BRINP1O60477 761 aa10.88□□□□□ -0.67
SNX13-212ENST00000498463 KPNA6O60684 536 aa10.88□□□□□ -0.67
SNX13-212ENST00000498463 DLGAP3O95886 979 aa10.88□□□□□ -0.67
SNX13-212ENST00000498463 KRT18P05783 430 aaKnown RBP10.88□□□□□ -0.67
SNX13-212ENST00000498463 AFF1P51825 1210 aaKnown RBP10.88□□□□□ -0.67
SNX13-212ENST00000498463 GABREP78334 506 aa10.88□□□□□ -0.67
SNX13-212ENST00000498463 ID3Q02535 119 aa10.88□□□□□ -0.67
SNX13-212ENST00000498463 SUZ12Q15022 739 aaKnown RBP10.88□□□□□ -0.67
SNX13-212ENST00000498463 NKG7Q16617 165 aa10.88□□□□□ -0.67
SNX13-212ENST00000498463 C20orf204Q6ZNR8 217 aa10.88□□□□□ -0.67
SNX13-212ENST00000498463 ADAT2Q7Z6V5 191 aaKnown RBP10.88□□□□□ -0.67
SNX13-212ENST00000498463 C14orf80Q86SX3 495 aa10.88□□□□□ -0.67
SNX13-212ENST00000498463 BAHD1Q8TBE0 780 aaPredicted RBP10.88□□□□□ -0.67
SNX13-212ENST00000498463 KIFC2Q96AC6 838 aa10.88□□□□□ -0.67
SNX13-212ENST00000498463 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.88□□□□□ -0.67
SNX13-212ENST00000498463 CCDC8Q9H0W5 538 aaPredicted RBP10.88□□□□□ -0.67
SNX13-212ENST00000498463 SPDYE3A6NKU9 549 aa10.87□□□□□ -0.67
SNX13-212ENST00000498463 EFCAB14O75071 495 aa10.87□□□□□ -0.67
SNX13-212ENST00000498463 ASLP04424 464 aa10.87□□□□□ -0.67
SNX13-212ENST00000498463 ALAS2P22557 587 aa10.87□□□□□ -0.67
SNX13-212ENST00000498463 SPATS2Q86XZ4 545 aaKnown RBP10.87□□□□□ -0.67
SNX13-212ENST00000498463 ZNF507Q8TCN5 953 aa10.87□□□□□ -0.67
SNX13-212ENST00000498463 CYB5D2Q8WUJ1 264 aa10.87□□□□□ -0.67
SNX13-212ENST00000498463 ZNF512BQ96KM6 892 aaPredicted RBP10.87□□□□□ -0.67
SNX13-212ENST00000498463 MRGPRX3Q96LB0 322 aa10.87□□□□□ -0.67
SNX13-212ENST00000498463 MTFR1LQ9H019 292 aa10.87□□□□□ -0.67
SNX13-212ENST00000498463 CDH19Q9H159 772 aa10.87□□□□□ -0.67
SNX13-212ENST00000498463 ARNT2Q9HBZ2 717 aa10.87□□□□□ -0.67
SNX13-212ENST00000498463 SENP2Q9HC62 589 aa10.87□□□□□ -0.67
SNX13-212ENST00000498463 GGA1Q9UJY5 639 aa10.87□□□□□ -0.67
SNX13-212ENST00000498463 SYNGAP1Q96PV0 1343 aa10.86□□□□□ -0.67
SNX13-212ENST00000498463 PPFIA3O75145 1194 aa10.86□□□□□ -0.67
SNX13-212ENST00000498463 PPM1BO75688 479 aa10.86□□□□□ -0.67
SNX13-212ENST00000498463 ALBP02768 609 aa10.86□□□□□ -0.67
SNX13-212ENST00000498463 WFDC8Q8IUA0 241 aa10.86□□□□□ -0.67
SNX13-212ENST00000498463 YIPF4Q9BSR8 244 aa10.86□□□□□ -0.67
SNX13-212ENST00000498463 PUS7LQ9H0K6 701 aaKnown RBP10.86□□□□□ -0.67
SNX13-212ENST00000498463 AASDHPPTQ9NRN7 309 aa10.86□□□□□ -0.67
SNX13-212ENST00000498463 WHRNQ9P202 907 aa10.86□□□□□ -0.67
SNX13-212ENST00000498463 ZNF451Q9Y4E5 1061 aa10.86□□□□□ -0.67
SNX13-212ENST00000498463 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.85□□□□□ -0.67
SNX13-212ENST00000498463 NOP56O00567 594 aaKnown RBP10.85□□□□□ -0.67
SNX13-212ENST00000498463 TMPRSS2O15393 492 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 DLX3O60479 287 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 ADAM11O75078 769 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 IGFALSP35858 605 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 GAS6Q14393 721 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 TRIM59Q8IWR1 403 aa10.85□□□□□ -0.67
SNX13-212ENST00000498463 GALNT11Q8NCW6 608 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms