RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CENPBP07199 599 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 THBS1P07996 1170 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 ATF3P18847 181 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 PAX3P23760 479 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 CNGA1P29973 690 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 TXKP42681 527 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 TDO2P48775 406 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 DMWDQ09019 674 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 MAMLD1Q13495 774 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 C21orf62-AS1Q17RA5 79 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 CLEC16AQ2KHT3 1053 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 LRIT3Q3SXY7 679 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 HP1BP3Q5SSJ5 553 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 C1orf94Q6P1W5 598 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 PLEKHH3Q7Z736 793 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 ZBED8Q8IZ13 594 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 HS6ST2Q96MM7 605 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 PRPF18Q99633 342 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 NAT9Q9BTE0 207 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 CLK4Q9HAZ1 481 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 TMEM59LQ9UK28 342 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 STRIP2Q9ULQ0 834 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 PROCRQ9UNN8 238 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 HIVEP3Q5T1R4 2406 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 A0A087WZG4 1122 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 NOP56O00567 594 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 RDH16O75452 317 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 SYF2O95926 243 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 F11P03951 625 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 VEGFAP15692 232 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 SLC2A5P22732 501 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 PTX3P26022 381 aaPredicted RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 ATP1A2P50993 1020 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 RAC1P63000 192 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 GRB7Q14451 532 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 MAP7D1Q3KQU3 841 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 NAALADL2Q58DX5 795 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 TBCELQ5QJ74 424 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 ZCCHC8Q6NZY4 707 aaKnown RBP1.72□□□□□ -2.13
XRN1-214ENST00000498077 KLHL35Q6PF15 583 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 TOGARAM2Q6ZUX3 1019 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 C14orf37Q86TY3 774 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 TMEM87AQ8NBN3 555 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 WNT5BQ9H1J7 359 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 RETREG1Q9H6L5 497 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 SCRT2Q9NQ03 307 aa1.72□□□□□ -2.13
XRN1-214ENST00000498077 TMEM8BA6NDV4 472 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 SLC10A3P09131 477 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 ATP2A2P16615 1042 aaKnown RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 SMPD1P17405 629 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 CASQ1P31415 396 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 PTGIRP43119 386 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 AAK1Q2M2I8 961 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 TRMT5Q32P41 509 aaKnown RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 AKAP4Q5JQC9 854 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 ANKRD45Q5TZF3 282 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 LSRQ86X29 649 aaPredicted RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 DNAJC10Q8IXB1 793 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 DEPDC4Q8N2C3 294 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 PJA1Q8NG27 643 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 EVI5LQ96CN4 794 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 ZSWIM3Q96MP5 696 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 CDK15Q96Q40 435 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 HTATIP2Q9BUP3 242 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 PRO3102Q9H379 93 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 ZNF395Q9H8N7 513 aaPredicted RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 SEPSECSQ9HD40 501 aaKnown RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 FAM198AQ9UFP1 575 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 KLHL3Q9UH77 587 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 SERTAD1Q9UHV2 236 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 JAG2Q9Y219 1238 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 CLTCQ00610 1675 aaKnown RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 A0A1B0GUH1 482 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 MTSS1O43312 755 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 GDF11O95390 407 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 C6P13671 934 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 SLC5A2P31639 672 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 OR3A4PP47883 348 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 GAD2Q05329 585 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 PPATQ06203 517 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 KCNMA1Q12791 1236 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 SRSF7Q16629 238 aaKnown RBP eCLIP1.71□□□□□ -2.14
XRN1-214ENST00000498077 DEFB115Q30KQ5 88 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 CNPY1Q3B7I2 92 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 DGKKQ5KSL6 1271 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 GIGYF2Q6Y7W6 1299 aaKnown RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 C19orf35Q6ZS72 473 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 DEFB123Q8N688 67 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 RUBCNQ92622 972 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 CAVIN3Q969G5 261 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 ZSCAN10Q96SZ4 725 aaPredicted RBP1.71□□□□□ -2.14
XRN1-214ENST00000498077 TSPY26PQ9H489 355 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 KLHL1Q9NR64 748 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 MBIPQ9NS73 344 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 ZBTB40Q9NUA8 1239 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 FAM118AQ9NWS6 357 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 DAGLAQ9Y4D2 1042 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 ALG6Q9Y672 507 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 CABIN1Q9Y6J0 2220 aa1.71□□□□□ -2.14
XRN1-214ENST00000498077 CLTCL1P53675 1640 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms