RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 BAHD1Q8TBE0 780 aaPredicted RBP6.37□□□□□ -1.39
CBX3-208ENST00000497498 VWCEQ96DN2 955 aa6.37□□□□□ -1.39
CBX3-208ENST00000497498 DIRC2Q96SL1 478 aa6.37□□□□□ -1.39
CBX3-208ENST00000497498 ASPNQ9BXN1 380 aa6.37□□□□□ -1.39
CBX3-208ENST00000497498 NSUN3Q9H649 340 aaKnown RBP6.37□□□□□ -1.39
CBX3-208ENST00000497498 KBTBD4Q9NVX7 518 aa6.37□□□□□ -1.39
CBX3-208ENST00000497498 KLHL3Q9UH77 587 aa6.37□□□□□ -1.39
CBX3-208ENST00000497498 ROBO2Q9HCK4 1378 aa6.36□□□□□ -1.39
CBX3-208ENST00000497498 TNNI2P48788 182 aa6.36□□□□□ -1.39
CBX3-208ENST00000497498 PDZD8Q8NEN9 1154 aa6.36□□□□□ -1.39
CBX3-208ENST00000497498 FBXO27Q8NI29 283 aa6.36□□□□□ -1.39
CBX3-208ENST00000497498 LRRC3Q9BY71 257 aa6.36□□□□□ -1.39
CBX3-208ENST00000497498 PCDHA11Q9Y5I1 949 aa6.36□□□□□ -1.39
CBX3-208ENST00000497498 GREM1O60565 184 aa6.35□□□□□ -1.39
CBX3-208ENST00000497498 CFPP27918 469 aa6.35□□□□□ -1.39
CBX3-208ENST00000497498 LTKP29376 864 aa6.35□□□□□ -1.39
CBX3-208ENST00000497498 FBXL19Q6PCT2 694 aa6.35□□□□□ -1.39
CBX3-208ENST00000497498 C1QL4Q86Z23 238 aa6.35□□□□□ -1.39
CBX3-208ENST00000497498 TOX2Q96NM4 488 aa6.35□□□□□ -1.39
CBX3-208ENST00000497498 COPRSQ9NQ92 184 aa6.35□□□□□ -1.39
CBX3-208ENST00000497498 SHISA3A0PJX4 238 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 RGS13O14921 159 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 ATE1O95260 518 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 C1QTNF9P0C862 333 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 TRHRP34981 398 aaPredicted RBP6.34□□□□□ -1.39
CBX3-208ENST00000497498 NR0B2Q15466 257 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 ANKLE2Q86XL3 938 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 PHACTR4Q8IZ21 702 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 LILRA2Q8N149 483 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 OXR1Q8N573 874 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 DHX38Q92620 1227 aaKnown RBP6.34□□□□□ -1.39
CBX3-208ENST00000497498 KIF2CQ99661 725 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 RNF32Q9H0A6 362 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 GZF1Q9H116 711 aaPredicted RBP6.34□□□□□ -1.39
CBX3-208ENST00000497498 EPB41L4BQ9H329 900 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 DCP1AQ9NPI6 582 aaPredicted RBP6.34□□□□□ -1.39
CBX3-208ENST00000497498 ZNF281Q9Y2X9 895 aa6.34□□□□□ -1.39
CBX3-208ENST00000497498 FITM1A5D6W6 292 aa6.33□□□□□ -1.4
CBX3-208ENST00000497498 SLC22A31A6NKX4 558 aa6.33□□□□□ -1.4
CBX3-208ENST00000497498 NFIBO00712 420 aa6.33□□□□□ -1.4
CBX3-208ENST00000497498 EIF4A3P38919 411 aaKnown RBP6.33□□□□□ -1.4
CBX3-208ENST00000497498 TEKQ02763 1124 aa6.33□□□□□ -1.4
CBX3-208ENST00000497498 MLECQ14165 292 aa6.33□□□□□ -1.4
CBX3-208ENST00000497498 CWF19L2Q2TBE0 894 aaKnown RBP6.33□□□□□ -1.4
CBX3-208ENST00000497498 LCE4AQ5TA78 99 aa6.33□□□□□ -1.4
CBX3-208ENST00000497498 ENOX1Q8TC92 643 aaKnown RBP6.33□□□□□ -1.4
CBX3-208ENST00000497498 C19orf44Q9H6X5 657 aa6.33□□□□□ -1.4
CBX3-208ENST00000497498 KCNK12Q9HB15 430 aa6.33□□□□□ -1.4
CBX3-208ENST00000497498 TLR3O15455 904 aaKnown RBP6.32□□□□□ -1.4
CBX3-208ENST00000497498 UBOX5O94941 541 aa6.32□□□□□ -1.4
CBX3-208ENST00000497498 MED14OSP0DP75 135 aa6.32□□□□□ -1.4
CBX3-208ENST00000497498 GBP1P32455 592 aa6.32□□□□□ -1.4
CBX3-208ENST00000497498 TIGD5Q53EQ6 642 aa6.32□□□□□ -1.4
CBX3-208ENST00000497498 EHMT1Q9H9B1 1298 aa6.32□□□□□ -1.4
CBX3-208ENST00000497498 BRMS1Q9HCU9 246 aa6.32□□□□□ -1.4
CBX3-208ENST00000497498 GMIPQ9P107 970 aa6.32□□□□□ -1.4
CBX3-208ENST00000497498 EBF1Q9UH73 591 aa6.32□□□□□ -1.4
CBX3-208ENST00000497498 SUPT16HQ9Y5B9 1047 aaKnown RBP6.32□□□□□ -1.4
CBX3-208ENST00000497498 TMEM253P0C7T8 217 aa6.31□□□□□ -1.4
CBX3-208ENST00000497498 GLDCP23378 1020 aa6.31□□□□□ -1.4
CBX3-208ENST00000497498 MRPL58Q14197 206 aaKnown RBP6.31□□□□□ -1.4
CBX3-208ENST00000497498 ARSHQ5FYA8 562 aa6.31□□□□□ -1.4
CBX3-208ENST00000497498 CDCP2Q5VXM1 449 aa6.31□□□□□ -1.4
CBX3-208ENST00000497498 SPPL2CQ8IUH8 684 aa6.31□□□□□ -1.4
CBX3-208ENST00000497498 SIAH1Q8IUQ4 282 aa6.31□□□□□ -1.4
CBX3-208ENST00000497498 LRRC56Q8IYG6 542 aaPredicted RBP6.31□□□□□ -1.4
CBX3-208ENST00000497498 ZSCAN18Q8TBC5 510 aaPredicted RBP6.31□□□□□ -1.4
CBX3-208ENST00000497498 SYTL5Q8TDW5 730 aaPredicted RBP6.31□□□□□ -1.4
CBX3-208ENST00000497498 ZNF296Q8WUU4 475 aaPredicted RBP6.31□□□□□ -1.4
CBX3-208ENST00000497498 LINC01599Q8WXQ3 324 aa6.31□□□□□ -1.4
CBX3-208ENST00000497498 SYTL4Q96C24 671 aaPredicted RBP6.31□□□□□ -1.4
CBX3-208ENST00000497498 SLC26A8Q96RN1 970 aa6.31□□□□□ -1.4
CBX3-208ENST00000497498 CD320Q9NPF0 282 aa6.31□□□□□ -1.4
CBX3-208ENST00000497498 PCDHB14Q9Y5E9 798 aa6.31□□□□□ -1.4
CBX3-208ENST00000497498 ETV2O00321 342 aaPredicted RBP6.3□□□□□ -1.4
CBX3-208ENST00000497498 CRKP46108 304 aa6.3□□□□□ -1.4
CBX3-208ENST00000497498 RNF4P78317 190 aa6.3□□□□□ -1.4
CBX3-208ENST00000497498 CHRNEQ04844 493 aa6.3□□□□□ -1.4
CBX3-208ENST00000497498 DUSP4Q13115 394 aa6.3□□□□□ -1.4
CBX3-208ENST00000497498 NMIQ13287 307 aaPredicted RBP6.3□□□□□ -1.4
CBX3-208ENST00000497498 SNX17Q15036 470 aa6.3□□□□□ -1.4
CBX3-208ENST00000497498 CLEC16AQ2KHT3 1053 aa6.3□□□□□ -1.4
CBX3-208ENST00000497498 LCNL1Q6ZST4 164 aa6.3□□□□□ -1.4
CBX3-208ENST00000497498 IRF2BP1Q8IU81 584 aa6.3□□□□□ -1.4
CBX3-208ENST00000497498 ANKS4BQ8N8V4 417 aa6.3□□□□□ -1.4
CBX3-208ENST00000497498 G6PC3Q9BUM1 346 aa6.3□□□□□ -1.4
CBX3-208ENST00000497498 HDAC8Q9BY41 377 aa6.3□□□□□ -1.4
CBX3-208ENST00000497498 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.3□□□□□ -1.4
CBX3-208ENST00000497498 CWC22Q9HCG8 908 aaKnown RBP6.3□□□□□ -1.4
CBX3-208ENST00000497498 YBX2Q9Y2T7 364 aaKnown RBP6.3□□□□□ -1.4
CBX3-208ENST00000497498 RAG1P15918 1043 aa6.29□□□□□ -1.4
CBX3-208ENST00000497498 NBPF12Q5TAG4 269 aaPredicted RBP6.29□□□□□ -1.4
CBX3-208ENST00000497498 RNF111Q6ZNA4 994 aa6.29□□□□□ -1.4
CBX3-208ENST00000497498 ATG14Q6ZNE5 492 aa6.29□□□□□ -1.4
CBX3-208ENST00000497498 REXO1Q8N1G1 1221 aaKnown RBP6.29□□□□□ -1.4
CBX3-208ENST00000497498 USHBP1Q8N6Y0 703 aa6.29□□□□□ -1.4
CBX3-208ENST00000497498 DAGLBQ8NCG7 672 aa6.29□□□□□ -1.4
CBX3-208ENST00000497498 SHISA4Q96DD7 197 aa6.29□□□□□ -1.4
CBX3-208ENST00000497498 BCL2L13Q9BXK5 485 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms