RNA–Protein interactions for RNA: ENST00000497107.1

ITGA6-211, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-211ENST00000497107 MED1Q15648 1581 aaPredicted RBP7.66□□□□□ -1.18
ITGA6-211ENST00000497107 CAMTA1Q9Y6Y1 1673 aa7.66□□□□□ -1.18
ITGA6-211ENST00000497107 RGPD2P0DJD1 1756 aa7.66□□□□□ -1.18
ITGA6-211ENST00000497107 CACNA1FO60840 1977 aa7.66□□□□□ -1.18
ITGA6-211ENST00000497107 F6X3S4 739 aa7.65□□□□□ -1.18
ITGA6-211ENST00000497107 ABCC6O95255 1503 aa7.65□□□□□ -1.18
ITGA6-211ENST00000497107 PTPRAP18433 802 aa7.65□□□□□ -1.18
ITGA6-211ENST00000497107 EIF2S2P20042 333 aaKnown RBP7.65□□□□□ -1.18
ITGA6-211ENST00000497107 FMR1NBQ8N0W7 255 aaPredicted RBP7.65□□□□□ -1.18
ITGA6-211ENST00000497107 IL22RA1Q8N6P7 574 aa7.65□□□□□ -1.18
ITGA6-211ENST00000497107 DDX17Q92841 729 aaKnown RBP7.65□□□□□ -1.18
ITGA6-211ENST00000497107 ALKBH8Q96BT7 664 aaKnown RBP7.65□□□□□ -1.18
ITGA6-211ENST00000497107 TBC1D32Q96NH3 1257 aa7.65□□□□□ -1.18
ITGA6-211ENST00000497107 LMTK3Q96Q04 1460 aa7.65□□□□□ -1.18
ITGA6-211ENST00000497107 FAM208AQ9UK61 1670 aaKnown RBP7.64□□□□□ -1.19
ITGA6-211ENST00000497107 PXDNLA1KZ92 1463 aa7.64□□□□□ -1.19
ITGA6-211ENST00000497107 PXDNQ92626 1479 aa7.64□□□□□ -1.19
ITGA6-211ENST00000497107 ATP10DQ9P241 1426 aa7.64□□□□□ -1.19
ITGA6-211ENST00000497107 CPDO75976 1380 aa7.64□□□□□ -1.19
ITGA6-211ENST00000497107 FAM229AH3BQW9 127 aa7.64□□□□□ -1.19
ITGA6-211ENST00000497107 MAPK1P28482 360 aa7.64□□□□□ -1.19
ITGA6-211ENST00000497107 CDC27P30260 824 aa7.64□□□□□ -1.19
ITGA6-211ENST00000497107 BRINP3Q76B58 766 aa7.64□□□□□ -1.19
ITGA6-211ENST00000497107 DNAJC25Q9H1X3 360 aa7.64□□□□□ -1.19
ITGA6-211ENST00000497107 DZANK1Q9NVP4 752 aa7.64□□□□□ -1.19
ITGA6-211ENST00000497107 PPME1Q9Y570 386 aa7.64□□□□□ -1.19
ITGA6-211ENST00000497107 KDM3BQ7LBC6 1761 aa7.64□□□□□ -1.19
ITGA6-211ENST00000497107 PDE2AO00408 941 aaPredicted RBP7.63□□□□□ -1.19
ITGA6-211ENST00000497107 GPR182O15218 404 aa7.63□□□□□ -1.19
ITGA6-211ENST00000497107 KCNQ3O43525 872 aa7.63□□□□□ -1.19
ITGA6-211ENST00000497107 CPNE3O75131 537 aaKnown RBP7.63□□□□□ -1.19
ITGA6-211ENST00000497107 HSP90AB1P08238 724 aaKnown RBP7.63□□□□□ -1.19
ITGA6-211ENST00000497107 ATP8B2P98198 1209 aa7.63□□□□□ -1.19
ITGA6-211ENST00000497107 FBXO11Q86XK2 927 aa7.63□□□□□ -1.19
ITGA6-211ENST00000497107 ZSCAN29Q8IWY8 852 aaPredicted RBP7.63□□□□□ -1.19
ITGA6-211ENST00000497107 GALNT12Q8IXK2 581 aa7.63□□□□□ -1.19
ITGA6-211ENST00000497107 IFNL2Q8IZJ0 200 aa7.63□□□□□ -1.19
ITGA6-211ENST00000497107 TMEM102Q8N9M5 508 aaPredicted RBP7.63□□□□□ -1.19
ITGA6-211ENST00000497107 OSMRQ99650 979 aa7.63□□□□□ -1.19
ITGA6-211ENST00000497107 C22orf23Q9BZE7 217 aa7.63□□□□□ -1.19
ITGA6-211ENST00000497107 SRCIN1Q9C0H9 1055 aa7.63□□□□□ -1.19
ITGA6-211ENST00000497107 ADAM19Q9H013 955 aa7.63□□□□□ -1.19
ITGA6-211ENST00000497107 PHAXQ9H814 394 aaKnown RBP7.63□□□□□ -1.19
ITGA6-211ENST00000497107 DBF4Q9UBU7 674 aaPredicted RBP7.63□□□□□ -1.19
ITGA6-211ENST00000497107 HDAC5Q9UQL6 1122 aa7.63□□□□□ -1.19
ITGA6-211ENST00000497107 COL18A1P39060 1754 aa7.62□□□□□ -1.19
ITGA6-211ENST00000497107 STRCQ7RTU9 1775 aa7.62□□□□□ -1.19
ITGA6-211ENST00000497107 RGPD5Q99666 1765 aa7.62□□□□□ -1.19
ITGA6-211ENST00000497107 C9orf172C9J069 976 aa7.62□□□□□ -1.19
ITGA6-211ENST00000497107 UBTFL1P0CB47 393 aaPredicted RBP7.62□□□□□ -1.19
ITGA6-211ENST00000497107 PHKG2P15735 406 aa7.62□□□□□ -1.19
ITGA6-211ENST00000497107 CHRNA2Q15822 529 aa7.62□□□□□ -1.19
ITGA6-211ENST00000497107 TMC7Q7Z402 723 aa7.62□□□□□ -1.19
ITGA6-211ENST00000497107 DNAAF4Q8WXU2 420 aa7.62□□□□□ -1.19
ITGA6-211ENST00000497107 NIF3L1Q9GZT8 377 aa7.62□□□□□ -1.19
ITGA6-211ENST00000497107 LACRTQ9GZZ8 138 aa7.62□□□□□ -1.19
ITGA6-211ENST00000497107 SLC52A2Q9HAB3 445 aa7.62□□□□□ -1.19
ITGA6-211ENST00000497107 CHPF2Q9P2E5 772 aa7.62□□□□□ -1.19
ITGA6-211ENST00000497107 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.62□□□□□ -1.19
ITGA6-211ENST00000497107 HEG1Q9ULI3 1381 aa7.61□□□□□ -1.19
ITGA6-211ENST00000497107 ZNF335Q9H4Z2 1342 aaPredicted RBP7.61□□□□□ -1.19
ITGA6-211ENST00000497107 NFKBIEO00221 500 aa7.61□□□□□ -1.19
ITGA6-211ENST00000497107 CDC45O75419 566 aa7.61□□□□□ -1.19
ITGA6-211ENST00000497107 ALDH1L1O75891 902 aa7.61□□□□□ -1.19
ITGA6-211ENST00000497107 IGHA2P01877 340 aa7.61□□□□□ -1.19
ITGA6-211ENST00000497107 CABP4P57796 275 aa7.61□□□□□ -1.19
ITGA6-211ENST00000497107 NRG1Q02297 640 aaPredicted RBP7.61□□□□□ -1.19
ITGA6-211ENST00000497107 LRP8Q14114 963 aa7.61□□□□□ -1.19
ITGA6-211ENST00000497107 TTC22Q5TAA0 569 aa7.61□□□□□ -1.19
ITGA6-211ENST00000497107 FAM117BQ6P1L5 589 aa7.61□□□□□ -1.19
ITGA6-211ENST00000497107 POP1Q99575 1024 aaKnown RBP7.61□□□□□ -1.19
ITGA6-211ENST00000497107 ZKSCAN3Q9BRR0 538 aa7.61□□□□□ -1.19
ITGA6-211ENST00000497107 USP44Q9H0E7 712 aa7.61□□□□□ -1.19
ITGA6-211ENST00000497107 HYPKQ9NX55 129 aa7.61□□□□□ -1.19
ITGA6-211ENST00000497107 XIRP1Q702N8 1843 aaKnown RBP7.61□□□□□ -1.19
ITGA6-211ENST00000497107 ADAMTS7Q9UKP4 1686 aa7.6□□□□□ -1.19
ITGA6-211ENST00000497107 PI4KAP2A4QPH2 592 aa7.6□□□□□ -1.19
ITGA6-211ENST00000497107 DDX58O95786 925 aaKnown RBP7.6□□□□□ -1.19
ITGA6-211ENST00000497107 ACPPP15309 386 aa7.6□□□□□ -1.19
ITGA6-211ENST00000497107 ORC1Q13415 861 aa7.6□□□□□ -1.19
ITGA6-211ENST00000497107 GRIK4Q16099 956 aa7.6□□□□□ -1.19
ITGA6-211ENST00000497107 CASC1Q6TDU7 716 aa7.6□□□□□ -1.19
ITGA6-211ENST00000497107 PI4KAP1Q8N8J0 262 aa7.6□□□□□ -1.19
ITGA6-211ENST00000497107 NXPE3Q969Y0 559 aa7.6□□□□□ -1.19
ITGA6-211ENST00000497107 LENG1Q96BZ8 264 aaPredicted RBP7.6□□□□□ -1.19
ITGA6-211ENST00000497107 BHLHE41Q9C0J9 482 aaPredicted RBP7.6□□□□□ -1.19
ITGA6-211ENST00000497107 PRDM11Q9NQV5 511 aa7.6□□□□□ -1.19
ITGA6-211ENST00000497107 DDX21Q9NR30 783 aaKnown RBP eCLIP7.6□□□□□ -1.19
ITGA6-211ENST00000497107 USP35Q9P2H5 1018 aa7.6□□□□□ -1.19
ITGA6-211ENST00000497107 LRRFIP2Q9Y608 721 aaKnown RBP7.6□□□□□ -1.19
ITGA6-211ENST00000497107 N4BP2Q86UW6 1770 aaPredicted RBP7.59□□□□□ -1.19
ITGA6-211ENST00000497107 WDR17Q8IZU2 1322 aa7.59□□□□□ -1.19
ITGA6-211ENST00000497107 CRYBG1Q9Y4K1 1723 aa7.59□□□□□ -1.19
ITGA6-211ENST00000497107 EIF1AYO14602 144 aaKnown RBP7.59□□□□□ -1.19
ITGA6-211ENST00000497107 SMARCA5O60264 1052 aaPredicted RBP7.59□□□□□ -1.19
ITGA6-211ENST00000497107 RAB11FIP3O75154 756 aa7.59□□□□□ -1.19
ITGA6-211ENST00000497107 DEAF1O75398 565 aaPredicted RBP7.59□□□□□ -1.19
ITGA6-211ENST00000497107 POLR3DP05423 398 aaPredicted RBP7.59□□□□□ -1.19
ITGA6-211ENST00000497107 ERCC3P19447 782 aa7.59□□□□□ -1.19
ITGA6-211ENST00000497107 BEND3Q5T5X7 828 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms