RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 MICU3Q86XE3 530 aa21.37■■□□□ 1.01
RGP1-202ENST00000496906 WDR18Q9BV38 432 aa21.37■■□□□ 1.01
RGP1-202ENST00000496906 AS3MTQ9HBK9 375 aa21.37■■□□□ 1.01
RGP1-202ENST00000496906 SH2B1Q9NRF2 756 aaPredicted RBP21.37■■□□□ 1.01
RGP1-202ENST00000496906 NAP1L2Q9ULW6 460 aaPredicted RBP21.37■■□□□ 1.01
RGP1-202ENST00000496906 TMX2Q9Y320 296 aa21.37■■□□□ 1.01
RGP1-202ENST00000496906 MYH4Q9Y623 1939 aa21.37■■□□□ 1.01
RGP1-202ENST00000496906 NID2Q14112 1375 aa21.36■■□□□ 1.01
RGP1-202ENST00000496906 ZBTB43O43298 467 aa21.36■■□□□ 1.01
RGP1-202ENST00000496906 RXRAP19793 462 aa21.36■■□□□ 1.01
RGP1-202ENST00000496906 RAB11FIP4Q86YS3 637 aa21.36■■□□□ 1.01
RGP1-202ENST00000496906 ELP3Q9H9T3 547 aa21.36■■□□□ 1.01
RGP1-202ENST00000496906 ZHX2Q9Y6X8 837 aa21.36■■□□□ 1.01
RGP1-202ENST00000496906 SPDYE5A6NIY4 337 aa21.36■■□□□ 1.01
RGP1-202ENST00000496906 PFKFB2O60825 505 aa21.36■■□□□ 1.01
RGP1-202ENST00000496906 GMCL1P1Q8NEA9 526 aa21.36■■□□□ 1.01
RGP1-202ENST00000496906 NUP133Q8WUM0 1156 aa21.36■■□□□ 1.01
RGP1-202ENST00000496906 SH2D4AQ9H788 454 aa21.36■■□□□ 1.01
RGP1-202ENST00000496906 PHIPQ8WWQ0 1821 aa21.35■■□□□ 1.01
RGP1-202ENST00000496906 CALM1P0DP23 149 aa21.35■■□□□ 1.01
RGP1-202ENST00000496906 CALM2P0DP24 149 aa21.35■■□□□ 1.01
RGP1-202ENST00000496906 CALM3P0DP25 149 aa21.35■■□□□ 1.01
RGP1-202ENST00000496906 METAP2P50579 478 aaKnown RBP eCLIP21.35■■□□□ 1.01
RGP1-202ENST00000496906 STK3Q13188 491 aa21.35■■□□□ 1.01
RGP1-202ENST00000496906 BECN1Q14457 450 aa21.35■■□□□ 1.01
RGP1-202ENST00000496906 ERO1BQ86YB8 467 aa21.35■■□□□ 1.01
RGP1-202ENST00000496906 ZNF280CQ8ND82 737 aa21.35■■□□□ 1.01
RGP1-202ENST00000496906 CNKSR2Q8WXI2 1034 aa21.35■■□□□ 1.01
RGP1-202ENST00000496906 SLKQ9H2G2 1235 aaPredicted RBP21.35■■□□□ 1.01
RGP1-202ENST00000496906 AFG3L2Q9Y4W6 797 aa21.35■■□□□ 1.01
RGP1-202ENST00000496906 GOLGA8AA7E2F4 631 aa21.34■■□□□ 1.01
RGP1-202ENST00000496906 SNHG28P0DPA3 235 aa21.34■■□□□ 1.01
RGP1-202ENST00000496906 PPATQ06203 517 aa21.34■■□□□ 1.01
RGP1-202ENST00000496906 ST3GAL1Q11201 340 aa21.34■■□□□ 1.01
RGP1-202ENST00000496906 SCRN1Q12765 414 aa21.34■■□□□ 1.01
RGP1-202ENST00000496906 SPP2Q13103 211 aa21.34■■□□□ 1.01
RGP1-202ENST00000496906 RASGRP2Q7LDG7 609 aa21.34■■□□□ 1.01
RGP1-202ENST00000496906 GTF3C6Q969F1 213 aa21.34■■□□□ 1.01
RGP1-202ENST00000496906 MAP3K14Q99558 947 aa21.34■■□□□ 1.01
RGP1-202ENST00000496906 FEZ1Q99689 392 aa21.34■■□□□ 1.01
RGP1-202ENST00000496906 KIAA1683Q9H0B3 1180 aa21.34■■□□□ 1.01
RGP1-202ENST00000496906 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.34■■□□□ 1.01
RGP1-202ENST00000496906 USP17L10C9JJH3 530 aa21.33■■□□□ 1.01
RGP1-202ENST00000496906 PDHBP11177 359 aa21.33■■□□□ 1.01
RGP1-202ENST00000496906 CCT2P78371 535 aaKnown RBP21.33■■□□□ 1.01
RGP1-202ENST00000496906 CCDC144CPQ8IYA2 1237 aa21.33■■□□□ 1.01
RGP1-202ENST00000496906 NECAB1Q8N987 351 aa21.33■■□□□ 1.01
RGP1-202ENST00000496906 VCPKMTQ9H867 229 aa21.33■■□□□ 1.01
RGP1-202ENST00000496906 MTMR7Q9Y216 660 aa21.33■■□□□ 1.01
RGP1-202ENST00000496906 TRIM75PA6NK02 468 aa21.32■■□□□ 1
RGP1-202ENST00000496906 F5H6K3 240 aa21.32■■□□□ 1
RGP1-202ENST00000496906 NDUFB10O96000 172 aa21.32■■□□□ 1
RGP1-202ENST00000496906 BACE1P56817 501 aa21.32■■□□□ 1
RGP1-202ENST00000496906 KLRC3Q07444 240 aa21.32■■□□□ 1
RGP1-202ENST00000496906 MTMR2Q13614 643 aa21.32■■□□□ 1
RGP1-202ENST00000496906 GRM4Q14833 912 aa21.32■■□□□ 1
RGP1-202ENST00000496906 FANCBQ8NB91 859 aa21.32■■□□□ 1
RGP1-202ENST00000496906 SLC10A4Q96EP9 437 aa21.32■■□□□ 1
RGP1-202ENST00000496906 OTUD5Q96G74 571 aa21.32■■□□□ 1
RGP1-202ENST00000496906 NCOA5Q9HCD5 579 aaKnown RBP21.32■■□□□ 1
RGP1-202ENST00000496906 GOPCQ9HD26 462 aa21.32■■□□□ 1
RGP1-202ENST00000496906 FAM217BQ9NTX9 383 aaPredicted RBP21.32■■□□□ 1
RGP1-202ENST00000496906 CDC27P30260 824 aa21.31■■□□□ 1
RGP1-202ENST00000496906 HUNKP57058 714 aa21.31■■□□□ 1
RGP1-202ENST00000496906 PPIL2Q13356 520 aa21.31■■□□□ 1
RGP1-202ENST00000496906 ZYXQ15942 572 aaKnown RBP21.31■■□□□ 1
RGP1-202ENST00000496906 RTN1Q16799 776 aa21.31■■□□□ 1
RGP1-202ENST00000496906 KIAA1755Q5JYT7 1200 aa21.31■■□□□ 1
RGP1-202ENST00000496906 SLFN13Q68D06 897 aa21.31■■□□□ 1
RGP1-202ENST00000496906 SAPCD2Q86UD0 394 aa21.31■■□□□ 1
RGP1-202ENST00000496906 CTCFLQ8NI51 663 aaPredicted RBP21.31■■□□□ 1
RGP1-202ENST00000496906 OPTNQ96CV9 577 aa21.31■■□□□ 1
RGP1-202ENST00000496906 USP14P54578 494 aa21.31■■□□□ 1
RGP1-202ENST00000496906 CUL4AQ13619 759 aa21.31■■□□□ 1
RGP1-202ENST00000496906 PPP2R5BQ15173 497 aa21.31■■□□□ 1
RGP1-202ENST00000496906 CCDC83Q8IWF9 413 aa21.31■■□□□ 1
RGP1-202ENST00000496906 DCAF4Q8WV16 495 aa21.31■■□□□ 1
RGP1-202ENST00000496906 GMCL1Q96IK5 515 aa21.31■■□□□ 1
RGP1-202ENST00000496906 MAD2L2Q9UI95 211 aa21.31■■□□□ 1
RGP1-202ENST00000496906 IRF6O14896 467 aa21.3■■□□□ 1
RGP1-202ENST00000496906 RAD21O60216 631 aa21.3■■□□□ 1
RGP1-202ENST00000496906 KIF5BP33176 963 aa21.3■■□□□ 1
RGP1-202ENST00000496906 USP17L2Q6R6M4 530 aa21.3■■□□□ 1
RGP1-202ENST00000496906 SPICE1Q8N0Z3 855 aa21.3■■□□□ 1
RGP1-202ENST00000496906 CHMP4CQ96CF2 233 aa21.3■■□□□ 1
RGP1-202ENST00000496906 RBM28Q9NW13 759 aaKnown RBP21.3■■□□□ 1
RGP1-202ENST00000496906 KCNH4Q9UQ05 1017 aa21.3■■□□□ 1
RGP1-202ENST00000496906 TLL2Q9Y6L7 1015 aa21.3■■□□□ 1
RGP1-202ENST00000496906 PALM3A6NDB9 673 aaPredicted RBP21.29■■□□□ 1
RGP1-202ENST00000496906 TMEM88BA6NKF7 163 aa21.29■■□□□ 1
RGP1-202ENST00000496906 C19orf81C9J6K1 198 aa21.29■■□□□ 1
RGP1-202ENST00000496906 PARP1P09874 1014 aaKnown RBP21.29■■□□□ 1
RGP1-202ENST00000496906 ADD1P35611 737 aaKnown RBP21.29■■□□□ 1
RGP1-202ENST00000496906 GJA5P36382 358 aa21.29■■□□□ 1
RGP1-202ENST00000496906 SLC1A4P43007 532 aa21.29■■□□□ 1
RGP1-202ENST00000496906 ZNF543Q08ER8 600 aa21.29■■□□□ 1
RGP1-202ENST00000496906 DGKZQ13574 1117 aa21.29■■□□□ 1
RGP1-202ENST00000496906 STAG2Q8N3U4 1231 aa21.29■■□□□ 1
RGP1-202ENST00000496906 LPAR1Q92633 364 aa21.29■■□□□ 1
RGP1-202ENST00000496906 EMILIN3Q9NT22 766 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms