RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 SGSM2O43147 1006 aa15.75■□□□□ 0.11
PHGDH-207ENST00000496756 PLCG2P16885 1265 aa15.75■□□□□ 0.11
PHGDH-207ENST00000496756 FOXP4Q8IVH2 680 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-207ENST00000496756 SPATA5Q8NB90 893 aa15.75■□□□□ 0.11
PHGDH-207ENST00000496756 ZNF512BQ96KM6 892 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-207ENST00000496756 SEMA6BQ9H3T3 888 aa15.75■□□□□ 0.11
PHGDH-207ENST00000496756 HMG20BQ9P0W2 317 aa15.75■□□□□ 0.11
PHGDH-207ENST00000496756 DDX20Q9UHI6 824 aaKnown RBP15.75■□□□□ 0.11
PHGDH-207ENST00000496756 FRMPD3Q5JV73 1810 aa15.74■□□□□ 0.11
PHGDH-207ENST00000496756 BAG3O95817 575 aa15.74■□□□□ 0.11
PHGDH-207ENST00000496756 HSCBQ8IWL3 235 aa15.74■□□□□ 0.11
PHGDH-207ENST00000496756 CRACR2BQ8N4Y2 399 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-207ENST00000496756 DBNDD2Q9BQY9 259 aa15.74■□□□□ 0.11
PHGDH-207ENST00000496756 FSD1Q9BTV5 496 aa15.74■□□□□ 0.11
PHGDH-207ENST00000496756 TLR7Q9NYK1 1049 aaKnown RBP15.74■□□□□ 0.11
PHGDH-207ENST00000496756 RABGAP1Q9Y3P9 1069 aa15.74■□□□□ 0.11
PHGDH-207ENST00000496756 TTC28Q96AY4 2481 aa15.74■□□□□ 0.11
PHGDH-207ENST00000496756 SPTBN5Q9NRC6 3674 aaKnown RBP15.74■□□□□ 0.11
PHGDH-207ENST00000496756 SLC15A5A6NIM6 579 aa15.73■□□□□ 0.11
PHGDH-207ENST00000496756 CNGA1P29973 690 aa15.73■□□□□ 0.11
PHGDH-207ENST00000496756 ATN1P54259 1190 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-207ENST00000496756 RTP1P59025 263 aa15.73■□□□□ 0.11
PHGDH-207ENST00000496756 SMAD3P84022 425 aaKnown RBP15.73■□□□□ 0.11
PHGDH-207ENST00000496756 ATP2B2Q01814 1243 aa15.73■□□□□ 0.11
PHGDH-207ENST00000496756 USP17L2Q6R6M4 530 aa15.73■□□□□ 0.11
PHGDH-207ENST00000496756 METTL16Q86W50 562 aaKnown RBP15.73■□□□□ 0.11
PHGDH-207ENST00000496756 SH3RF3Q8TEJ3 882 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-207ENST00000496756 BOLA2Q9H3K6 86 aa15.73■□□□□ 0.11
PHGDH-207ENST00000496756 ANO2Q9NQ90 1003 aa15.73■□□□□ 0.11
PHGDH-207ENST00000496756 LRP2BPQ9P2M1 347 aa15.73■□□□□ 0.11
PHGDH-207ENST00000496756 IVNS1ABPQ9Y6Y0 642 aa15.73■□□□□ 0.11
PHGDH-207ENST00000496756 HOXC6P09630 235 aa15.72■□□□□ 0.11
PHGDH-207ENST00000496756 UQCRFS1P1P0C7P4 283 aa15.72■□□□□ 0.11
PHGDH-207ENST00000496756 SHHQ15465 462 aa15.72■□□□□ 0.11
PHGDH-207ENST00000496756 TTC39AQ5SRH9 613 aa15.72■□□□□ 0.11
PHGDH-207ENST00000496756 ARRDC4Q8NCT1 418 aa15.72■□□□□ 0.11
PHGDH-207ENST00000496756 IL17RAQ96F46 866 aa15.72■□□□□ 0.11
PHGDH-207ENST00000496756 SNRKQ9NRH2 765 aa15.72■□□□□ 0.11
PHGDH-207ENST00000496756 EMILIN3Q9NT22 766 aa15.72■□□□□ 0.11
PHGDH-207ENST00000496756 ZBTB21Q9ULJ3 1066 aa15.72■□□□□ 0.11
PHGDH-207ENST00000496756 USP17L15C9J2P7 530 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 USP17L13C9JLJ4 530 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 USP17L11C9JVI0 530 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 USP17L18D6R9N7 530 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 USP17L22D6RA61 530 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 USP17L17D6RBQ6 530 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 USP17L19D6RCP7 530 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 USP17L20D6RJB6 530 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 ST18O60284 1047 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 PTPREP23469 700 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 ARID4AP29374 1257 aaPredicted RBP15.71■□□□□ 0.11
PHGDH-207ENST00000496756 JAG1P78504 1218 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 USP17L24Q0WX57 530 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 WDR78Q5VTH9 848 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 KBTBD3Q8NAB2 608 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 DNAJC18Q9H819 358 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 FLRT1Q9NZU1 646 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 ATP11BQ9Y2G3 1177 aa15.71■□□□□ 0.11
PHGDH-207ENST00000496756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.71■□□□□ 0.11
PHGDH-207ENST00000496756 LTBP2Q14767 1821 aa15.71■□□□□ 0.1
PHGDH-207ENST00000496756 GDF11O95390 407 aa15.7■□□□□ 0.1
PHGDH-207ENST00000496756 ZFYP08048 801 aaPredicted RBP15.7■□□□□ 0.1
PHGDH-207ENST00000496756 MCM2P49736 904 aa15.7■□□□□ 0.1
PHGDH-207ENST00000496756 TTF1Q15361 905 aaPredicted RBP15.7■□□□□ 0.1
PHGDH-207ENST00000496756 NAA16Q6N069 864 aaPredicted RBP15.7■□□□□ 0.1
PHGDH-207ENST00000496756 POTEEQ6S8J3 1075 aa15.7■□□□□ 0.1
PHGDH-207ENST00000496756 PI16Q6UXB8 463 aa15.7■□□□□ 0.1
PHGDH-207ENST00000496756 TGFBRAP1Q8WUH2 860 aa15.7■□□□□ 0.1
PHGDH-207ENST00000496756 MYLIPQ8WY64 445 aa15.7■□□□□ 0.1
PHGDH-207ENST00000496756 C12orf42Q96LP6 360 aa15.7■□□□□ 0.1
PHGDH-207ENST00000496756 PAG1Q9NWQ8 432 aa15.7■□□□□ 0.1
PHGDH-207ENST00000496756 AATFQ9NY61 560 aaKnown RBP eCLIP15.7■□□□□ 0.1
PHGDH-207ENST00000496756 SIPA1L1O43166 1804 aa15.7■□□□□ 0.1
PHGDH-207ENST00000496756 CDH23Q9H251 3354 aa15.7■□□□□ 0.1
PHGDH-207ENST00000496756 FLT1P17948 1338 aa15.69■□□□□ 0.1
PHGDH-207ENST00000496756 TMEM265A0A087WTH1 108 aa15.69■□□□□ 0.1
PHGDH-207ENST00000496756 KBTBD13C9JR72 458 aa15.69■□□□□ 0.1
PHGDH-207ENST00000496756 HLA-DOAP06340 250 aa15.69■□□□□ 0.1
PHGDH-207ENST00000496756 FOSL2P15408 326 aa15.69■□□□□ 0.1
PHGDH-207ENST00000496756 USP14P54578 494 aa15.69■□□□□ 0.1
PHGDH-207ENST00000496756 PPP4CP60510 307 aa15.69■□□□□ 0.1
PHGDH-207ENST00000496756 GRB14Q14449 540 aa15.69■□□□□ 0.1
PHGDH-207ENST00000496756 C9orf50Q5SZB4 431 aa15.69■□□□□ 0.1
PHGDH-207ENST00000496756 ZSCAN25Q6NSZ9 544 aa15.69■□□□□ 0.1
PHGDH-207ENST00000496756 CWC27Q6UX04 472 aaKnown RBP15.69■□□□□ 0.1
PHGDH-207ENST00000496756 SLC39A5Q6ZMH5 540 aa15.69■□□□□ 0.1
PHGDH-207ENST00000496756 FEZ1Q99689 392 aa15.69■□□□□ 0.1
PHGDH-207ENST00000496756 PRDM5Q9NQX1 630 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-207ENST00000496756 PALD1Q9ULE6 856 aa15.69■□□□□ 0.1
PHGDH-207ENST00000496756 IGSF3O75054 1194 aa15.68■□□□□ 0.1
PHGDH-207ENST00000496756 CNMDO75829 334 aa15.68■□□□□ 0.1
PHGDH-207ENST00000496756 CYP2C19P33261 490 aa15.68■□□□□ 0.1
PHGDH-207ENST00000496756 GJC2Q5T442 439 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-207ENST00000496756 LBX2Q6XYB7 198 aa15.68■□□□□ 0.1
PHGDH-207ENST00000496756 CATSPERGQ6ZRH7 1159 aa15.68■□□□□ 0.1
PHGDH-207ENST00000496756 MAPKAPK5Q8IW41 473 aa15.68■□□□□ 0.1
PHGDH-207ENST00000496756 BADQ92934 168 aa15.68■□□□□ 0.1
PHGDH-207ENST00000496756 DNAJC2Q99543 621 aaKnown RBP15.68■□□□□ 0.1
PHGDH-207ENST00000496756 TTYH1Q9H313 450 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-207ENST00000496756 HELLSQ9NRZ9 838 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms