RNA–Protein interactions for RNA: ENST00000496722.1

UBE2L3-203, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2

Gene UBE2L3, Length 3,451 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-203ENST00000496722 DHX8Q14562 1220 aaKnown RBP16.07■□□□□ 0.16
UBE2L3-203ENST00000496722 SLC51AQ86UW1 340 aa16.07■□□□□ 0.16
UBE2L3-203ENST00000496722 GDAP1L1Q96MZ0 367 aa16.07■□□□□ 0.16
UBE2L3-203ENST00000496722 NUP88Q99567 741 aaPredicted RBP16.07■□□□□ 0.16
UBE2L3-203ENST00000496722 HDAC6Q9UBN7 1215 aa16.07■□□□□ 0.16
UBE2L3-203ENST00000496722 KLRK1P26718 216 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 ZNF34Q8IZ26 560 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 ZSCAN10Q96SZ4 725 aaPredicted RBP16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 PHF20Q9BVI0 1012 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 MYH2Q9UKX2 1941 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 CCDC196A0A1B0GTZ2 297 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 KIF5CO60282 957 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 LMAN1P49257 510 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 FUT2Q10981 343 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 NPY5RQ15761 445 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 SRBD1Q8N5C6 995 aaKnown RBP16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 ZNF579Q8NAF0 562 aaKnown RBP16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 ZNF384Q8TF68 577 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 AATFQ9NY61 560 aaKnown RBP eCLIP16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 CEP131Q9UPN4 1083 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 COL4A1P02462 1669 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 ERCC5P28715 1186 aaPredicted RBP16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 TTC38Q5R3I4 469 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 NOA1Q8NC60 698 aaKnown RBP16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 RGS22Q8NE09 1264 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 RABGGTAQ92696 567 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 ESR2Q92731 530 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 ABCB6Q9NP58 842 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 SLAIN2Q9P270 581 aa16.06■□□□□ 0.16
UBE2L3-203ENST00000496722 USP17L12C9JPN9 530 aa16.05■□□□□ 0.16
UBE2L3-203ENST00000496722 USP17L21D6R901 530 aa16.05■□□□□ 0.16
UBE2L3-203ENST00000496722 CDKAL1Q5VV42 579 aa16.05■□□□□ 0.16
UBE2L3-203ENST00000496722 BICDL1Q6ZP65 573 aa16.05■□□□□ 0.16
UBE2L3-203ENST00000496722 GPKOWQ92917 476 aaPredicted RBP eCLIP16.05■□□□□ 0.165e-13■□□□□ 10.6
UBE2L3-203ENST00000496722 MYH8P13535 1937 aa16.05■□□□□ 0.16
UBE2L3-203ENST00000496722 PARP4Q9UKK3 1724 aaKnown RBP16.05■□□□□ 0.16
UBE2L3-203ENST00000496722 SRGAP2O75044 1071 aa16.05■□□□□ 0.16
UBE2L3-203ENST00000496722 CAPN2P17655 700 aa16.05■□□□□ 0.16
UBE2L3-203ENST00000496722 SKIDA1Q1XH10 827 aa16.05■□□□□ 0.16
UBE2L3-203ENST00000496722 SRGAP1Q7Z6B7 1085 aa16.05■□□□□ 0.16
UBE2L3-203ENST00000496722 PANX2Q96RD6 677 aa16.05■□□□□ 0.16
UBE2L3-203ENST00000496722 GUCA1BQ9UMX6 200 aa16.05■□□□□ 0.16
UBE2L3-203ENST00000496722 NIP7Q9Y221 180 aaKnown RBP eCLIP16.05■□□□□ 0.16
UBE2L3-203ENST00000496722 PBX1P40424 430 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 VPS18Q9P253 973 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 LRP6O75581 1613 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 CHD4Q14839 1912 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 ZMYND10O75800 440 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 IGHMBP2P38935 993 aaKnown RBP16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 PMS1P54277 932 aaKnown RBP16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 VSNL1P62760 191 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 SH3RF1Q7Z6J0 888 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 TRIML1Q8N9V2 468 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 UBXN6Q9BZV1 441 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 SHANK3Q9BYB0 1731 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 GOLGA6L9A6NEM1 432 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 KANK3Q6NY19 840 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 CATIPQ7Z7H3 387 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 RNF26Q9BY78 433 aaPredicted RBP16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 ADAM21Q9UKJ8 722 aa16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 BAZ2AQ9UIF9 1905 aaKnown RBP16.04■□□□□ 0.16
UBE2L3-203ENST00000496722 NLRP5P59047 1200 aa16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 PAPPAQ13219 1627 aa16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 TPM1P09493 284 aa16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 TROAPQ12815 778 aa16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 NELFBQ8WX92 580 aa16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 TMEM51Q9NW97 253 aa16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 LCMT1Q9UIC8 334 aa16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 CDC23Q9UJX2 597 aa16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 NKRFO15226 690 aaKnown RBP eCLIP16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 MYO1BO43795 1136 aa16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 ERCC3P19447 782 aa16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 KRT9P35527 623 aa16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 RASGRP2Q7LDG7 609 aa16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 RNF41Q9H4P4 317 aaPredicted RBP16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 ABHD10Q9NUJ1 306 aa16.03■□□□□ 0.16
UBE2L3-203ENST00000496722 UBXN1Q04323 297 aa16.02■□□□□ 0.16
UBE2L3-203ENST00000496722 FILIP1LQ4L180 1135 aa16.02■□□□□ 0.16
UBE2L3-203ENST00000496722 CAPZA3Q96KX2 299 aa16.02■□□□□ 0.16
UBE2L3-203ENST00000496722 TFCP2L1Q9NZI6 479 aa16.02■□□□□ 0.16
UBE2L3-203ENST00000496722 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.02■□□□□ 0.16
UBE2L3-203ENST00000496722 PNPLA7Q6ZV29 1317 aa16.02■□□□□ 0.16
UBE2L3-203ENST00000496722 CTAGE9A4FU28 777 aa16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 ARHGAP25P42331 645 aa16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 PRCPP42785 496 aa16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 KLK7P49862 253 aa16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 TMTC2Q8N394 836 aa16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 RIOK1Q9BRS2 568 aaKnown RBP16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 CPVLQ9H3G5 476 aa16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 PLEKHA4Q9H4M7 779 aa16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 GNAT2P19087 354 aa16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 MRPS25P82663 173 aaKnown RBP16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 BEND6Q5SZJ8 279 aaPredicted RBP16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 JAKMIP3Q5VZ66 844 aa16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 CTR9Q6PD62 1173 aa16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 TAF1P21675 1872 aa16.02■□□□□ 0.15
UBE2L3-203ENST00000496722 MYH6P13533 1939 aa16.01■□□□□ 0.15
UBE2L3-203ENST00000496722 KCNJ18B7U540 433 aa16.01■□□□□ 0.15
UBE2L3-203ENST00000496722 XBP1P17861 261 aa16.01■□□□□ 0.15
UBE2L3-203ENST00000496722 COPB1P53618 953 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms