RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	RLF	Q13129	1914 aa		18.91	■□□□□ 0.62
PRKCZ-222	ENST00000496325	ROBO3	Q96MS0	1386 aa		18.91	■□□□□ 0.62
PRKCZ-222	ENST00000496325	ELN	P15502	786 aa		18.9	■□□□□ 0.62
PRKCZ-222	ENST00000496325	HOXD10	P28358	340 aa		18.9	■□□□□ 0.62
PRKCZ-222	ENST00000496325	UBXN2A	P68543	259 aa		18.9	■□□□□ 0.62
PRKCZ-222	ENST00000496325	TMEM179	Q6ZVK1	233 aa		18.9	■□□□□ 0.62
PRKCZ-222	ENST00000496325	CENPQ	Q7L2Z9	268 aa	Predicted RBP	18.9	■□□□□ 0.62
PRKCZ-222	ENST00000496325	PARK7	Q99497	189 aa	Known RBP	18.9	■□□□□ 0.62
PRKCZ-222	ENST00000496325	LAMA4	Q16363	1823 aa		18.9	■□□□□ 0.62
PRKCZ-222	ENST00000496325		A0A1W2PRG0	241 aa		18.89	■□□□□ 0.61
PRKCZ-222	ENST00000496325	RASA1	P20936	1047 aa		18.89	■□□□□ 0.61
PRKCZ-222	ENST00000496325	USP17L2	Q6R6M4	530 aa		18.89	■□□□□ 0.61
PRKCZ-222	ENST00000496325	CWC27	Q6UX04	472 aa	Known RBP	18.89	■□□□□ 0.61
PRKCZ-222	ENST00000496325	SIAH1	Q8IUQ4	282 aa		18.89	■□□□□ 0.61
PRKCZ-222	ENST00000496325	DIS3L	Q8TF46	1054 aa	Known RBP	18.89	■□□□□ 0.61
PRKCZ-222	ENST00000496325	CCDC17	Q96LX7	622 aa		18.89	■□□□□ 0.61
PRKCZ-222	ENST00000496325	GDF15	Q99988	308 aa		18.89	■□□□□ 0.61
PRKCZ-222	ENST00000496325	TMOD4	Q9NZQ9	345 aa		18.89	■□□□□ 0.61
PRKCZ-222	ENST00000496325	PRDM1	O75626	825 aa		18.88	■□□□□ 0.61
PRKCZ-222	ENST00000496325	HSPD1	P10809	573 aa	Known RBP	18.88	■□□□□ 0.61
PRKCZ-222	ENST00000496325	BCR	P11274	1271 aa		18.88	■□□□□ 0.61
PRKCZ-222	ENST00000496325	PPARA	Q07869	468 aa		18.88	■□□□□ 0.61
PRKCZ-222	ENST00000496325	PAWR	Q96IZ0	340 aa	Known RBP	18.88	■□□□□ 0.61
PRKCZ-222	ENST00000496325	DEFB118	Q96PH6	123 aa		18.88	■□□□□ 0.61
PRKCZ-222	ENST00000496325	FEZ1	Q99689	392 aa		18.88	■□□□□ 0.61
PRKCZ-222	ENST00000496325	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
PRKCZ-222	ENST00000496325	MKNK2	Q9HBH9	465 aa		18.88	■□□□□ 0.61
PRKCZ-222	ENST00000496325	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	18.88	■□□□□ 0.61
PRKCZ-222	ENST00000496325	CCDC171	Q6TFL3	1326 aa		18.88	■□□□□ 0.61
PRKCZ-222	ENST00000496325	COL11A1	P12107	1806 aa	Predicted RBP	18.88	■□□□□ 0.61
PRKCZ-222	ENST00000496325	TFRC	P02786	760 aa	Known RBP	18.87	■□□□□ 0.61
PRKCZ-222	ENST00000496325	INHA	P05111	366 aa		18.87	■□□□□ 0.61
PRKCZ-222	ENST00000496325	CTDSPL2	Q05D32	466 aa		18.87	■□□□□ 0.61
PRKCZ-222	ENST00000496325	ALX1	Q15699	326 aa		18.87	■□□□□ 0.61
PRKCZ-222	ENST00000496325	SLAIN1	Q8ND83	568 aa		18.87	■□□□□ 0.61
PRKCZ-222	ENST00000496325	KIAA1683	Q9H0B3	1180 aa		18.87	■□□□□ 0.61
PRKCZ-222	ENST00000496325	ASCC2	Q9H1I8	757 aa	Predicted RBP	18.87	■□□□□ 0.61
PRKCZ-222	ENST00000496325	IL25	Q9H293	177 aa		18.87	■□□□□ 0.61
PRKCZ-222	ENST00000496325	INCENP	Q9NQS7	918 aa		18.87	■□□□□ 0.61
PRKCZ-222	ENST00000496325	DIAPH3	Q9NSV4	1193 aa		18.87	■□□□□ 0.61
PRKCZ-222	ENST00000496325	MTMR10	Q9NXD2	777 aa		18.87	■□□□□ 0.61
PRKCZ-222	ENST00000496325	STXBP5L	Q9Y2K9	1186 aa		18.87	■□□□□ 0.61
PRKCZ-222	ENST00000496325	TACC3	Q9Y6A5	838 aa		18.87	■□□□□ 0.61
PRKCZ-222	ENST00000496325	ADCY3	O60266	1144 aa		18.86	■□□□□ 0.61
PRKCZ-222	ENST00000496325	FGA	P02671	866 aa		18.86	■□□□□ 0.61
PRKCZ-222	ENST00000496325	HOXA7	P31268	230 aa	Predicted RBP	18.86	■□□□□ 0.61
PRKCZ-222	ENST00000496325	KIAA1755	Q5JYT7	1200 aa		18.86	■□□□□ 0.61
PRKCZ-222	ENST00000496325	CCDC136	Q96JN2	1154 aa		18.86	■□□□□ 0.61
PRKCZ-222	ENST00000496325	C12orf42	Q96LP6	360 aa		18.86	■□□□□ 0.61
PRKCZ-222	ENST00000496325	HIP1	O00291	1037 aa		18.85	■□□□□ 0.61
PRKCZ-222	ENST00000496325	NEFL	P07196	543 aa		18.85	■□□□□ 0.61
PRKCZ-222	ENST00000496325	CENPB	P07199	599 aa	Predicted RBP	18.85	■□□□□ 0.61
PRKCZ-222	ENST00000496325	FLT3LG	P49771	235 aa		18.85	■□□□□ 0.61
PRKCZ-222	ENST00000496325	FCGRT	P55899	365 aa		18.85	■□□□□ 0.61
PRKCZ-222	ENST00000496325	ICA1	Q05084	483 aa		18.85	■□□□□ 0.61
PRKCZ-222	ENST00000496325	PABPC4	Q13310	644 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
PRKCZ-222	ENST00000496325	C7orf61	Q8IZ16	206 aa		18.85	■□□□□ 0.61
PRKCZ-222	ENST00000496325	SMCR8	Q8TEV9	937 aa	Predicted RBP	18.85	■□□□□ 0.61
PRKCZ-222	ENST00000496325	P2RX7	Q99572	595 aa	Known RBP	18.85	■□□□□ 0.61
PRKCZ-222	ENST00000496325	PNMA3	Q9UL41	463 aa		18.85	■□□□□ 0.61
PRKCZ-222	ENST00000496325	VCAN	P13611	3396 aa		18.85	■□□□□ 0.61
PRKCZ-222	ENST00000496325	PEX10	O60683	326 aa		18.84	■□□□□ 0.61
PRKCZ-222	ENST00000496325	EEF2	P13639	858 aa	Known RBP	18.84	■□□□□ 0.61
PRKCZ-222	ENST00000496325	SYN1	P17600	705 aa		18.84	■□□□□ 0.61
PRKCZ-222	ENST00000496325	BMP8B	P34820	402 aa		18.84	■□□□□ 0.61
PRKCZ-222	ENST00000496325	USP14	P54578	494 aa		18.84	■□□□□ 0.61
PRKCZ-222	ENST00000496325	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.84	■□□□□ 0.61
PRKCZ-222	ENST00000496325	ANKRD13C	Q8N6S4	541 aa		18.84	■□□□□ 0.61
PRKCZ-222	ENST00000496325	PLXNB2	O15031	1838 aa		18.84	■□□□□ 0.61
PRKCZ-222	ENST00000496325	ZNFX1	Q9P2E3	1918 aa	Known RBP	18.83	■□□□□ 0.6
PRKCZ-222	ENST00000496325	VCAM1	P19320	739 aa		18.83	■□□□□ 0.6
PRKCZ-222	ENST00000496325	MFAP1	P55081	439 aa	Known RBP	18.83	■□□□□ 0.6
PRKCZ-222	ENST00000496325	IRX3	P78415	501 aa	Predicted RBP	18.83	■□□□□ 0.6
PRKCZ-222	ENST00000496325	FAM47A	Q5JRC9	791 aa		18.83	■□□□□ 0.6
PRKCZ-222	ENST00000496325	GPR153	Q6NV75	609 aa		18.83	■□□□□ 0.6
PRKCZ-222	ENST00000496325	CRISPLD2	Q9H0B8	497 aa		18.83	■□□□□ 0.6
PRKCZ-222	ENST00000496325	KANSL2	Q9H9L4	492 aa		18.83	■□□□□ 0.6
PRKCZ-222	ENST00000496325	ARHGEF10L	Q9HCE6	1279 aa		18.83	■□□□□ 0.6
PRKCZ-222	ENST00000496325	PAK6	Q9NQU5	681 aa	Predicted RBP	18.83	■□□□□ 0.6
PRKCZ-222	ENST00000496325	ANAPC4	Q9UJX5	808 aa		18.83	■□□□□ 0.6
PRKCZ-222	ENST00000496325	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	18.83	■□□□□ 0.6
PRKCZ-222	ENST00000496325	TMX2	Q9Y320	296 aa		18.83	■□□□□ 0.6
PRKCZ-222	ENST00000496325	IGKV6D-41	A0A0C4DH26	115 aa		18.82	■□□□□ 0.6
PRKCZ-222	ENST00000496325	SLC3A2	P08195	630 aa	Known RBP	18.82	■□□□□ 0.6
PRKCZ-222	ENST00000496325	CHML	P26374	656 aa		18.82	■□□□□ 0.6
PRKCZ-222	ENST00000496325	HAND2	P61296	217 aa		18.82	■□□□□ 0.6
PRKCZ-222	ENST00000496325	ATP2B2	Q01814	1243 aa		18.82	■□□□□ 0.6
PRKCZ-222	ENST00000496325	PDE4B	Q07343	736 aa		18.82	■□□□□ 0.6
PRKCZ-222	ENST00000496325	POTEE	Q6S8J3	1075 aa		18.82	■□□□□ 0.6
PRKCZ-222	ENST00000496325	CATSPERG	Q6ZRH7	1159 aa		18.82	■□□□□ 0.6
PRKCZ-222	ENST00000496325	ZMYM6	O95789	1325 aa		18.81	■□□□□ 0.6
PRKCZ-222	ENST00000496325	USP17L15	C9J2P7	530 aa		18.81	■□□□□ 0.6
PRKCZ-222	ENST00000496325	USP17L13	C9JLJ4	530 aa		18.81	■□□□□ 0.6
PRKCZ-222	ENST00000496325	USP17L11	C9JVI0	530 aa		18.81	■□□□□ 0.6
PRKCZ-222	ENST00000496325	USP17L18	D6R9N7	530 aa		18.81	■□□□□ 0.6
PRKCZ-222	ENST00000496325	USP17L22	D6RA61	530 aa		18.81	■□□□□ 0.6
PRKCZ-222	ENST00000496325	USP17L17	D6RBQ6	530 aa		18.81	■□□□□ 0.6
PRKCZ-222	ENST00000496325	USP17L19	D6RCP7	530 aa		18.81	■□□□□ 0.6
PRKCZ-222	ENST00000496325	USP17L20	D6RJB6	530 aa		18.81	■□□□□ 0.6
PRKCZ-222	ENST00000496325	HERVK_113	P62684	666 aa		18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms