RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 ERICH2A1L162 156 aa11.38□□□□□ -0.59
PRPF3-207ENST00000496202 TESPA1A2RU30 521 aaPredicted RBP11.38□□□□□ -0.59
PRPF3-207ENST00000496202 BTBD19C9JJ37 291 aa11.38□□□□□ -0.59
PRPF3-207ENST00000496202 IGF2BP3O00425 579 aaKnown RBP eCLIP11.38□□□□□ -0.59
PRPF3-207ENST00000496202 NMT2O60551 498 aa11.38□□□□□ -0.59
PRPF3-207ENST00000496202 IRX3P78415 501 aaPredicted RBP11.38□□□□□ -0.59
PRPF3-207ENST00000496202 TAF1CQ15572 869 aaPredicted RBP11.38□□□□□ -0.59
PRPF3-207ENST00000496202 ANKRD23Q86SG2 305 aa11.38□□□□□ -0.59
PRPF3-207ENST00000496202 ZCCHC17Q9NP64 241 aaKnown RBP11.38□□□□□ -0.59
PRPF3-207ENST00000496202 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
PRPF3-207ENST00000496202 TAF6LQ9Y6J9 622 aa11.38□□□□□ -0.59
PRPF3-207ENST00000496202 A0A1W2PRG0 241 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 PDHXO00330 501 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 TRPA1O75762 1119 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 TOP1P11387 765 aaKnown RBP11.37□□□□□ -0.59
PRPF3-207ENST00000496202 HSPA4P34932 840 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 C8orf34Q49A92 452 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 STOX1Q6ZVD7 989 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 SPICE1Q8N0Z3 855 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 LRRC47Q8N1G4 583 aaKnown RBP11.37□□□□□ -0.59
PRPF3-207ENST00000496202 FAM43AQ8N2R8 423 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 LPAR1Q92633 364 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 C12orf42Q96LP6 360 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 ZSCAN10Q96SZ4 725 aaPredicted RBP11.37□□□□□ -0.59
PRPF3-207ENST00000496202 PARK7Q99497 189 aaKnown RBP11.37□□□□□ -0.59
PRPF3-207ENST00000496202 PTPN18Q99952 460 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 ZKSCAN3Q9BRR0 538 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 USP26Q9BXU7 913 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 TANGO6Q9C0B7 1094 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 VCPKMTQ9H867 229 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 EMILIN3Q9NT22 766 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 TCP11L1Q9NUJ3 509 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 WBP1LQ9NX94 342 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 ZSWIM5Q9P217 1185 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 SYNPO2Q9UMS6 1093 aa11.37□□□□□ -0.59
PRPF3-207ENST00000496202 TNKSO95271 1327 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 USP17L15C9J2P7 530 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 USP17L13C9JLJ4 530 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 USP17L11C9JVI0 530 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 USP17L18D6R9N7 530 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 USP17L22D6RA61 530 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 USP17L17D6RBQ6 530 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 USP17L19D6RCP7 530 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 USP17L20D6RJB6 530 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 IFIT3O14879 490 aaKnown RBP11.36□□□□□ -0.59
PRPF3-207ENST00000496202 VCAM1P19320 739 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 OSBPP22059 807 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 MCM5P33992 734 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 USP17L24Q0WX57 530 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 DGKZQ13574 1117 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 MOGSQ13724 837 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 TREML2Q5T2D2 321 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 CYB5R4Q7L1T6 521 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 SIAH1Q8IUQ4 282 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 MB21D2Q8IYB1 491 aaPredicted RBP11.36□□□□□ -0.59
PRPF3-207ENST00000496202 SMCR8Q8TEV9 937 aaPredicted RBP11.36□□□□□ -0.59
PRPF3-207ENST00000496202 TTC14Q96N46 770 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 RPAP3Q9H6T3 665 aaPredicted RBP11.36□□□□□ -0.59
PRPF3-207ENST00000496202 KAT14Q9H8E8 782 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 UPF2Q9HAU5 1272 aaKnown RBP11.36□□□□□ -0.59
PRPF3-207ENST00000496202 ZFYVE28Q9HCC9 887 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 IL17RBQ9NRM6 502 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 RNF186Q9NXI6 227 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 SAGE1Q9NXZ1 904 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 MTMR7Q9Y216 660 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 SLC45A1Q9Y2W3 748 aa11.36□□□□□ -0.59
PRPF3-207ENST00000496202 WDR46O15213 610 aaKnown RBP11.35□□□□□ -0.59
PRPF3-207ENST00000496202 PRC1O43663 620 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 NDUFB10O96000 172 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 HMGB1P09429 215 aaKnown RBP11.35□□□□□ -0.59
PRPF3-207ENST00000496202 HSPA1AP0DMV8 641 aaKnown RBP11.35□□□□□ -0.59
PRPF3-207ENST00000496202 HSPA1BP0DMV9 641 aaKnown RBP11.35□□□□□ -0.59
PRPF3-207ENST00000496202 PSMA5P28066 241 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 IKQ13123 557 aaPredicted RBP11.35□□□□□ -0.59
PRPF3-207ENST00000496202 WTAPQ15007 396 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 TMEM132AQ24JP5 1023 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 CCDC96Q2M329 555 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 TSGA10IPQ3SY00 556 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 TMEM67Q5HYA8 995 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 IFIT1BQ5T764 474 aaKnown RBP11.35□□□□□ -0.59
PRPF3-207ENST00000496202 SLFN13Q68D06 897 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 GPAT2Q6NUI2 795 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 DGKHQ86XP1 1220 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 RASEFQ8IZ41 740 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 ENAHQ8N8S7 591 aaPredicted RBP11.35□□□□□ -0.59
PRPF3-207ENST00000496202 GMCL1P1Q8NEA9 526 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 MKL1Q969V6 931 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 JAKMIP1Q96N16 626 aaKnown RBP11.35□□□□□ -0.59
PRPF3-207ENST00000496202 NEK1Q96PY6 1258 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 SNX14Q9Y5W7 946 aa11.35□□□□□ -0.59
PRPF3-207ENST00000496202 F5H6K3 240 aa11.34□□□□□ -0.59
PRPF3-207ENST00000496202 TBC1D8O95759 1140 aa11.34□□□□□ -0.59
PRPF3-207ENST00000496202 SLC1A4P43007 532 aa11.34□□□□□ -0.59
PRPF3-207ENST00000496202 FGD1P98174 961 aa11.34□□□□□ -0.59
PRPF3-207ENST00000496202 KLRC3Q07444 240 aa11.34□□□□□ -0.59
PRPF3-207ENST00000496202 CRHR2Q13324 411 aa11.34□□□□□ -0.59
PRPF3-207ENST00000496202 FAM83BQ5T0W9 1011 aa11.34□□□□□ -0.59
PRPF3-207ENST00000496202 BLOC1S2Q6QNY1 142 aa11.34□□□□□ -0.59
PRPF3-207ENST00000496202 CHST3Q7LGC8 479 aa11.34□□□□□ -0.59
PRPF3-207ENST00000496202 KCNB2Q92953 911 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms