RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 TTC28Q96AY4 2481 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 MUC3AQ02505 3323 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 A0A1W2PNR3 127 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 SHTN1A0MZ66 631 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 K7ELQ4 463 aaPredicted RBP5.67□□□□□ -1.5
VPS52-222ENST00000495981 KLF4O43474 513 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 SRGNP10124 158 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 ETFBP38117 255 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 SOX9P48436 509 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 PLEKHO1Q53GL0 409 aaPredicted RBP5.67□□□□□ -1.5
VPS52-222ENST00000495981 WDR44Q5JSH3 913 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 SULT6B1Q6IMI4 303 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 HPS1Q92902 700 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 TMEM74Q96NL1 305 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 TSEN34Q9BSV6 310 aaKnown RBP5.67□□□□□ -1.5
VPS52-222ENST00000495981 BRIP1Q9BX63 1249 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 SLC52A2Q9HAB3 445 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 ABCB6Q9NP58 842 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 POLMQ9NP87 494 aaPredicted RBP5.67□□□□□ -1.5
VPS52-222ENST00000495981 SALL4Q9UJQ4 1053 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 TTF2Q9UNY4 1162 aaKnown RBP5.67□□□□□ -1.5
VPS52-222ENST00000495981 EFR3BQ9Y2G0 817 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 ZBTB1Q9Y2K1 713 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 GJA3Q9Y6H8 435 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 DLG5Q8TDM6 1919 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 SLX4Q8IY92 1834 aa5.67□□□□□ -1.5
VPS52-222ENST00000495981 GREM1O60565 184 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 FBXO24O75426 580 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 CYP19A1P11511 503 aaPredicted RBP5.66□□□□□ -1.5
VPS52-222ENST00000495981 XRCC5P13010 732 aaKnown RBP5.66□□□□□ -1.5
VPS52-222ENST00000495981 EIF4A3P38919 411 aaKnown RBP5.66□□□□□ -1.5
VPS52-222ENST00000495981 MTHFSP49914 203 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 CABP4P57796 275 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 AKAP4Q5JQC9 854 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 C1orf141Q5JVX7 400 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 FBXL19Q6PCT2 694 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 PRICKLE2Q7Z3G6 844 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 CKAP2LQ8IYA6 745 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 GPC2Q8N158 579 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 LINC00528Q8N1L1 170 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 PHC3Q8NDX5 983 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 ZNF296Q8WUU4 475 aaPredicted RBP5.66□□□□□ -1.5
VPS52-222ENST00000495981 MKL1Q969V6 931 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 HHIPL1Q96JK4 782 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 CNTNAP3BQ96NU0 1288 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 TCF12Q99081 682 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 CNTNAP3Q9BZ76 1288 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 IRX2Q9BZI1 471 aaPredicted RBP5.66□□□□□ -1.5
VPS52-222ENST00000495981 ZCCHC2Q9C0B9 1178 aaKnown RBP5.66□□□□□ -1.5
VPS52-222ENST00000495981 R3HDMLQ9H3Y0 253 aa5.66□□□□□ -1.5
VPS52-222ENST00000495981 ANKRD36CQ5JPF3 1778 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 KIAA0100Q14667 2235 aaKnown RBP5.65□□□□□ -1.5
VPS52-222ENST00000495981 MINDY4BA8MYZ0 360 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 EN2P19622 333 aaPredicted RBP5.65□□□□□ -1.5
VPS52-222ENST00000495981 CES1P23141 567 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 HSD3B2P26439 372 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 FCGRTP55899 365 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 NFX1Q12986 1120 aaKnown RBP5.65□□□□□ -1.5
VPS52-222ENST00000495981 NOGQ13253 232 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 CCDC85BQ15834 202 aaPredicted RBP5.65□□□□□ -1.5
VPS52-222ENST00000495981 NFE2L2Q16236 605 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 ARSJQ5FYB0 599 aaPredicted RBP5.65□□□□□ -1.5
VPS52-222ENST00000495981 STYK1Q6J9G0 422 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 TRIM67Q6ZTA4 783 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 RNPC3Q96LT9 517 aaKnown RBP5.65□□□□□ -1.5
VPS52-222ENST00000495981 CEP63Q96MT8 703 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 EHD4Q9H223 541 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 CRISPLD1Q9H336 500 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 C11orf16Q9NQ32 467 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 KANSL3Q9P2N6 904 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 HCN2Q9UL51 889 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 PPM1HQ9ULR3 514 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 MRVI1Q9Y6F6 885 aa5.65□□□□□ -1.5
VPS52-222ENST00000495981 HEG1Q9ULI3 1381 aa5.65□□□□□ -1.51
VPS52-222ENST00000495981 LRRC37AA6NMS7 1700 aa5.65□□□□□ -1.51
VPS52-222ENST00000495981 LAMB2P55268 1798 aa5.65□□□□□ -1.51
VPS52-222ENST00000495981 SCN4AP35499 1836 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 A0A1B0GTH6 734 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 FAM221BA6H8Z2 402 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 H0YGN5 161 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 ENPP3O14638 875 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 RNMTO43148 476 aaKnown RBP5.64□□□□□ -1.51
VPS52-222ENST00000495981 ACPPP15309 386 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 RHOQP17081 205 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 GBP2P32456 591 aaPredicted RBP5.64□□□□□ -1.51
VPS52-222ENST00000495981 PDE6BP35913 854 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 IARSP41252 1262 aaKnown RBP5.64□□□□□ -1.51
VPS52-222ENST00000495981 CRKP46108 304 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 HUNKP57058 714 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 SLC39A6Q13433 755 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 RASA3Q14644 834 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 MTHFSDQ2M296 383 aaKnown RBP5.64□□□□□ -1.51
VPS52-222ENST00000495981 ANKS3Q6ZW76 656 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 MORC1Q86VD1 984 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 OR13H1Q8NG92 308 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 TRPM4Q8TD43 1214 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 POLR3GLQ9BT43 218 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 NT5C1AQ9BXI3 368 aa5.64□□□□□ -1.51
VPS52-222ENST00000495981 COL25A1Q9BXS0 654 aaPredicted RBP5.64□□□□□ -1.51
VPS52-222ENST00000495981 CHMP4AQ9BY43 222 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms