RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 ARSHQ5FYA8 562 aa8.92□□□□□ -0.98
CCDC39-207ENST00000495817 NLRC3Q7RTR2 1065 aa8.92□□□□□ -0.98
CCDC39-207ENST00000495817 WFDC3Q8IUB2 231 aa8.92□□□□□ -0.98
CCDC39-207ENST00000495817 CNNM2Q9H8M5 875 aa8.92□□□□□ -0.98
CCDC39-207ENST00000495817 CBX7O95931 251 aa8.91□□□□□ -0.98
CCDC39-207ENST00000495817 SSBP05455 408 aaKnown RBP eCLIP8.91□□□□□ -0.98
CCDC39-207ENST00000495817 CHMP4BP1P59074 171 aa8.91□□□□□ -0.98
CCDC39-207ENST00000495817 RNF4P78317 190 aa8.91□□□□□ -0.98
CCDC39-207ENST00000495817 DPH6Q7L8W6 267 aa8.91□□□□□ -0.98
CCDC39-207ENST00000495817 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.91□□□□□ -0.98
CCDC39-207ENST00000495817 KCNH3Q9ULD8 1083 aa8.91□□□□□ -0.98
CCDC39-207ENST00000495817 ST14Q9Y5Y6 855 aa8.91□□□□□ -0.98
CCDC39-207ENST00000495817 FUT4P22083 530 aa8.9□□□□□ -0.98
CCDC39-207ENST00000495817 GBP1P32455 592 aa8.9□□□□□ -0.98
CCDC39-207ENST00000495817 TNK2Q07912 1038 aa8.9□□□□□ -0.98
CCDC39-207ENST00000495817 ZNF574Q6ZN55 896 aaPredicted RBP8.9□□□□□ -0.98
CCDC39-207ENST00000495817 SPRED2Q7Z698 418 aa8.9□□□□□ -0.98
CCDC39-207ENST00000495817 ABI1Q8IZP0 508 aa8.9□□□□□ -0.98
CCDC39-207ENST00000495817 BAHD1Q8TBE0 780 aaPredicted RBP8.9□□□□□ -0.98
CCDC39-207ENST00000495817 ATG4CQ96DT6 458 aa8.9□□□□□ -0.98
CCDC39-207ENST00000495817 KREMEN1Q96MU8 473 aa8.9□□□□□ -0.98
CCDC39-207ENST00000495817 FERD3LQ96RJ6 166 aa8.9□□□□□ -0.98
CCDC39-207ENST00000495817 KIF2CQ99661 725 aa8.9□□□□□ -0.98
CCDC39-207ENST00000495817 TNFRSF10CO14798 259 aa8.89□□□□□ -0.99
CCDC39-207ENST00000495817 CD8BP10966 210 aa8.89□□□□□ -0.99
CCDC39-207ENST00000495817 BNIP3Q12983 259 aa8.89□□□□□ -0.99
CCDC39-207ENST00000495817 TAB3Q8N5C8 712 aaPredicted RBP8.89□□□□□ -0.99
CCDC39-207ENST00000495817 DTWD2Q8NBA8 298 aa8.89□□□□□ -0.99
CCDC39-207ENST00000495817 RBBP8NLQ8NC74 664 aaPredicted RBP8.89□□□□□ -0.99
CCDC39-207ENST00000495817 HSPA12BQ96MM6 686 aa8.89□□□□□ -0.99
CCDC39-207ENST00000495817 LNPKQ9C0E8 428 aa8.89□□□□□ -0.99
CCDC39-207ENST00000495817 TRIT1Q9H3H1 467 aaKnown RBP8.89□□□□□ -0.99
CCDC39-207ENST00000495817 COL17A1Q9UMD9 1497 aaPredicted RBP8.89□□□□□ -0.99
CCDC39-207ENST00000495817 UBOX5O94941 541 aa8.88□□□□□ -0.99
CCDC39-207ENST00000495817 NME1P15531 152 aaKnown RBP8.88□□□□□ -0.99
CCDC39-207ENST00000495817 IKZF1Q13422 519 aa8.88□□□□□ -0.99
CCDC39-207ENST00000495817 PLCL1Q15111 1095 aa8.88□□□□□ -0.99
CCDC39-207ENST00000495817 CDKAL1Q5VV42 579 aa8.88□□□□□ -0.99
CCDC39-207ENST00000495817 NBPF6Q5VWK0 638 aa8.88□□□□□ -0.99
CCDC39-207ENST00000495817 NBPF4Q96M43 638 aa8.88□□□□□ -0.99
CCDC39-207ENST00000495817 Q96M66 194 aa8.88□□□□□ -0.99
CCDC39-207ENST00000495817 TM9SF2Q99805 663 aa8.88□□□□□ -0.99
CCDC39-207ENST00000495817 SEMA3GQ9NS98 782 aa8.88□□□□□ -0.99
CCDC39-207ENST00000495817 LMCD1Q9NZU5 365 aa8.88□□□□□ -0.99
CCDC39-207ENST00000495817 IRAK1P51617 712 aa8.87□□□□□ -0.99
CCDC39-207ENST00000495817 INTS3Q68E01 1043 aaKnown RBP8.87□□□□□ -0.99
CCDC39-207ENST00000495817 TMPRSS7Q7RTY8 843 aa8.87□□□□□ -0.99
CCDC39-207ENST00000495817 CKAP2LQ8IYA6 745 aa8.87□□□□□ -0.99
CCDC39-207ENST00000495817 SRRTQ9BXP5 876 aaKnown RBP8.87□□□□□ -0.99
CCDC39-207ENST00000495817 GPR62Q9BZJ7 368 aa8.87□□□□□ -0.99
CCDC39-207ENST00000495817 H3BS24 57 aa8.86□□□□□ -0.99
CCDC39-207ENST00000495817 SLC23A3Q6PIS1 610 aa8.86□□□□□ -0.99
CCDC39-207ENST00000495817 CBLL1Q75N03 491 aa8.86□□□□□ -0.99
CCDC39-207ENST00000495817 CPLX3Q8WVH0 158 aa8.86□□□□□ -0.99
CCDC39-207ENST00000495817 ZNF408Q9H9D4 720 aa8.86□□□□□ -0.99
CCDC39-207ENST00000495817 GPATCH2Q9NW75 528 aa8.86□□□□□ -0.99
CCDC39-207ENST00000495817 ADGRE2Q9UHX3 823 aa8.86□□□□□ -0.99
CCDC39-207ENST00000495817 NOP9Q86U38 636 aaKnown RBP8.85□□□□□ -0.99
CCDC39-207ENST00000495817 VWCEQ96DN2 955 aa8.85□□□□□ -0.99
CCDC39-207ENST00000495817 PPT2Q9UMR5 302 aa8.85□□□□□ -0.99
CCDC39-207ENST00000495817 CLEC3AO75596 197 aa8.84□□□□□ -0.99
CCDC39-207ENST00000495817 SRFP11831 508 aa8.84□□□□□ -0.99
CCDC39-207ENST00000495817 CD96P40200 585 aa8.84□□□□□ -0.99
CCDC39-207ENST00000495817 CCDC144BQ3MJ40 725 aa8.84□□□□□ -0.99
CCDC39-207ENST00000495817 OR6P1Q8NGX9 317 aa8.84□□□□□ -0.99
CCDC39-207ENST00000495817 PMFBP1Q8TBY8 1022 aa8.84□□□□□ -0.99
CCDC39-207ENST00000495817 DHRS1Q96LJ7 313 aa8.84□□□□□ -0.99
CCDC39-207ENST00000495817 ANTXR1Q9H6X2 564 aa8.84□□□□□ -0.99
CCDC39-207ENST00000495817 ATP13A1Q9HD20 1204 aa8.84□□□□□ -0.99
CCDC39-207ENST00000495817 POLR2BP30876 1174 aaKnown RBP8.83□□□□□ -1
CCDC39-207ENST00000495817 ETFBP38117 255 aa8.83□□□□□ -1
CCDC39-207ENST00000495817 ZP2Q05996 745 aa8.83□□□□□ -1
CCDC39-207ENST00000495817 ZNF792Q3KQV3 632 aa8.83□□□□□ -1
CCDC39-207ENST00000495817 FBXW10Q5XX13 1052 aa8.83□□□□□ -1
CCDC39-207ENST00000495817 PI4K2BQ8TCG2 481 aa8.83□□□□□ -1
CCDC39-207ENST00000495817 UBE2FQ969M7 185 aa8.83□□□□□ -1
CCDC39-207ENST00000495817 SHDQ96IW2 340 aa8.83□□□□□ -1
CCDC39-207ENST00000495817 CRBNQ96SW2 442 aa8.83□□□□□ -1
CCDC39-207ENST00000495817 DUSP15Q9H1R2 295 aaPredicted RBP8.83□□□□□ -1
CCDC39-207ENST00000495817 GUCY2CP25092 1073 aa8.82□□□□□ -1
CCDC39-207ENST00000495817 EIF6P56537 245 aaKnown RBP8.82□□□□□ -1
CCDC39-207ENST00000495817 GAB4Q2WGN9 574 aa8.82□□□□□ -1
CCDC39-207ENST00000495817 NBPF12Q5TAG4 269 aaPredicted RBP8.82□□□□□ -1
CCDC39-207ENST00000495817 MCTP1Q6DN14 999 aa8.82□□□□□ -1
CCDC39-207ENST00000495817 ENOX1Q8TC92 643 aaKnown RBP8.82□□□□□ -1
CCDC39-207ENST00000495817 SLC9A7Q96T83 725 aa8.82□□□□□ -1
CCDC39-207ENST00000495817 ASCC2Q9H1I8 757 aaPredicted RBP8.82□□□□□ -1
CCDC39-207ENST00000495817 OSBPL2Q9H1P3 480 aa8.82□□□□□ -1
CCDC39-207ENST00000495817 ZSWIM5Q9P217 1185 aa8.82□□□□□ -1
CCDC39-207ENST00000495817 PRKAG3Q9UGI9 489 aa8.82□□□□□ -1
CCDC39-207ENST00000495817 GIPRP48546 466 aa8.81□□□□□ -1
CCDC39-207ENST00000495817 TNNI3KQ59H18 835 aa8.81□□□□□ -1
CCDC39-207ENST00000495817 TSPYL5Q86VY4 417 aaPredicted RBP8.81□□□□□ -1
CCDC39-207ENST00000495817 LSRQ86X29 649 aaPredicted RBP8.81□□□□□ -1
CCDC39-207ENST00000495817 C19orf47Q8N9M1 422 aaKnown RBP8.81□□□□□ -1
CCDC39-207ENST00000495817 CCDC120Q96HB5 630 aa8.81□□□□□ -1
CCDC39-207ENST00000495817 SLC6A18Q96N87 628 aa8.81□□□□□ -1
CCDC39-207ENST00000495817 MBNL3Q9NUK0 354 aaKnown RBP8.81□□□□□ -1
CCDC39-207ENST00000495817 MRVI1Q9Y6F6 885 aa8.81□□□□□ -1
CCDC39-207ENST00000495817 KLF4O43474 513 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms