RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 NEK2P51955 445 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 POLR2FP61218 127 aaKnown RBP10.56□□□□□ -0.72
RPSA-209ENST00000495394 NUCB1Q02818 461 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 WDR45BQ5MNZ6 344 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 PACS2Q86VP3 889 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 TEX9Q8N6V9 391 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 TNIP2Q8NFZ5 429 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 SLC16A10Q8TF71 515 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 TCP11Q8WWU5 503 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 APPBP2Q92624 585 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 CEP95Q96GE4 821 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 EPSTI1Q96J88 318 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 CNNM2Q9H8M5 875 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 FANCFQ9NPI8 374 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 ZRANB1Q9UGI0 708 aa10.56□□□□□ -0.72
RPSA-209ENST00000495394 FOXO3O43524 673 aa10.55□□□□□ -0.72
RPSA-209ENST00000495394 OPA1O60313 960 aa10.55□□□□□ -0.72
RPSA-209ENST00000495394 S100A5P33763 92 aa10.55□□□□□ -0.72
RPSA-209ENST00000495394 PLA2G4AP47712 749 aa10.55□□□□□ -0.72
RPSA-209ENST00000495394 CLCN2P51788 898 aa10.55□□□□□ -0.72
RPSA-209ENST00000495394 SLC10A5Q5PT55 438 aa10.55□□□□□ -0.72
RPSA-209ENST00000495394 NRKQ7Z2Y5 1582 aa10.55□□□□□ -0.72
RPSA-209ENST00000495394 EXOC4Q96A65 974 aa10.55□□□□□ -0.72
RPSA-209ENST00000495394 CLIP3Q96DZ5 547 aa10.55□□□□□ -0.72
RPSA-209ENST00000495394 CABP1Q9NZU7 370 aa10.55□□□□□ -0.72
RPSA-209ENST00000495394 A6NCN8 305 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 POM121CA8CG34 1229 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 KRT18P05783 430 aaKnown RBP10.54□□□□□ -0.72
RPSA-209ENST00000495394 CD9P21926 228 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 USP8P40818 1118 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 SUZ12Q15022 739 aaKnown RBP10.54□□□□□ -0.72
RPSA-209ENST00000495394 SH2D4BQ5SQS7 431 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 EMC10Q5UCC4 262 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 LINC00469Q8N7U9 141 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 SMYD1Q8NB12 490 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 SLAIN1Q8ND83 568 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 ACMSDQ8TDX5 336 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 GPR101Q96P66 508 aaPredicted RBP10.54□□□□□ -0.72
RPSA-209ENST00000495394 HDAC6Q9UBN7 1215 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 DDX41Q9UJV9 622 aaKnown RBP10.54□□□□□ -0.72
RPSA-209ENST00000495394 ALS2Q96Q42 1657 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 ACEP12821 1306 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 SOS2Q07890 1332 aaPredicted RBP10.54□□□□□ -0.72
RPSA-209ENST00000495394 PLEKHG2Q9H7P9 1386 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 RTN3O95197 1032 aaPredicted RBP10.54□□□□□ -0.72
RPSA-209ENST00000495394 RPL13P26373 211 aaKnown RBP10.54□□□□□ -0.72
RPSA-209ENST00000495394 CBLBQ13191 982 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 TAF1CQ15572 869 aaPredicted RBP10.54□□□□□ -0.72
RPSA-209ENST00000495394 GRAMD1BQ3KR37 738 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 ZC3H12BQ5HYM0 836 aaKnown RBP10.54□□□□□ -0.72
RPSA-209ENST00000495394 CEP135Q66GS9 1140 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 KAZNQ674X7 775 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 SYT10Q6XYQ8 523 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 MICALCLQ6ZW33 695 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 RSPH3Q86UC2 560 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 TXLNBQ8N3L3 684 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.54□□□□□ -0.72
RPSA-209ENST00000495394 SLC35B4Q969S0 331 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 MOGAT1Q96PD6 335 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 SYNCQ9H7C4 482 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 A1CFQ9NQ94 594 aaKnown RBP10.54□□□□□ -0.72
RPSA-209ENST00000495394 MAPK8IP1Q9UQF2 711 aa10.54□□□□□ -0.72
RPSA-209ENST00000495394 CPSF1Q10570 1443 aaKnown RBP10.53□□□□□ -0.72
RPSA-209ENST00000495394 CD163L1Q9NR16 1453 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 ATP6V1G1O75348 118 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 INMTO95050 263 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 CPP00450 1065 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 DMPKQ09013 629 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 SYCP1Q15431 976 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 GALNT17Q6IS24 598 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 B4GALNT3Q6L9W6 998 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 RTL10Q7L3V2 364 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 LURAP1LQ8IV03 231 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 LRRC43Q8N309 656 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 TUBA8Q9NY65 449 aaPredicted RBP10.53□□□□□ -0.72
RPSA-209ENST00000495394 SART1O43290 800 aaKnown RBP10.53□□□□□ -0.72
RPSA-209ENST00000495394 GZMAP12544 262 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 PPP2R1AP30153 589 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 HOXD11P31277 338 aaPredicted RBP10.53□□□□□ -0.72
RPSA-209ENST00000495394 ELF1P32519 619 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 SKIV2L2P42285 1042 aaKnown RBP10.53□□□□□ -0.72
RPSA-209ENST00000495394 PODNQ7Z5L7 613 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 RASSF3Q86WH2 238 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 SPC24Q8NBT2 197 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 FAM81AQ8TBF8 368 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 GPT2Q8TD30 523 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 DDX17Q92841 729 aaKnown RBP10.53□□□□□ -0.72
RPSA-209ENST00000495394 ARHGEF2Q92974 986 aaKnown RBP10.53□□□□□ -0.72
RPSA-209ENST00000495394 RELTQ969Z4 430 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 BACH2Q9BYV9 841 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 SEMA4AQ9H3S1 761 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 AASDHPPTQ9NRN7 309 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 PIH1D1Q9NWS0 290 aaKnown RBP10.53□□□□□ -0.72
RPSA-209ENST00000495394 MRFAP1Q9Y605 127 aa10.53□□□□□ -0.72
RPSA-209ENST00000495394 USP6P35125 1406 aa10.52□□□□□ -0.72
RPSA-209ENST00000495394 COL22A1Q8NFW1 1626 aaPredicted RBP10.52□□□□□ -0.73
RPSA-209ENST00000495394 CEP104O60308 925 aa10.52□□□□□ -0.73
RPSA-209ENST00000495394 KPNA6O60684 536 aa10.52□□□□□ -0.73
RPSA-209ENST00000495394 PPP2R5CQ13362 524 aa10.52□□□□□ -0.73
RPSA-209ENST00000495394 PKN2Q16513 984 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms