RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 FRYLO94915 3013 aa11.27□□□□□ -0.6
GARNL3-219ENST00000495172 ANKRD11Q6UB99 2663 aaPredicted RBP11.27□□□□□ -0.6
GARNL3-219ENST00000495172 ZBBXA8MT70 800 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 SLC5A1P13866 664 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 CAP2P40123 477 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 CCL23P55773 120 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 BACE1P56817 501 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 CCDC57Q2TAC2 916 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 LRRC24Q50LG9 513 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 PTCRAQ6ISU1 281 aaPredicted RBP11.27□□□□□ -0.61
GARNL3-219ENST00000495172 TMEM199Q8N511 208 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 GDPD5Q8WTR4 605 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 VWCEQ96DN2 955 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 MFSD14AQ96MC6 490 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 TMOD4Q9NZQ9 345 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 MUTYHQ9UIF7 546 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 PCDHA11Q9Y5I1 949 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 ZNF292O60281 2723 aa11.27□□□□□ -0.61
GARNL3-219ENST00000495172 MYADML2A6NDP7 307 aa11.26□□□□□ -0.61
GARNL3-219ENST00000495172 H3BQ06 376 aaPredicted RBP11.26□□□□□ -0.61
GARNL3-219ENST00000495172 ENTPD3O75355 529 aa11.26□□□□□ -0.61
GARNL3-219ENST00000495172 ADORA2AP29274 412 aa11.26□□□□□ -0.61
GARNL3-219ENST00000495172 TAP1Q03518 808 aa11.26□□□□□ -0.61
GARNL3-219ENST00000495172 LMOD3Q0VAK6 560 aa11.26□□□□□ -0.61
GARNL3-219ENST00000495172 ZYXQ15942 572 aaKnown RBP11.26□□□□□ -0.61
GARNL3-219ENST00000495172 DPP9Q86TI2 863 aa11.26□□□□□ -0.61
GARNL3-219ENST00000495172 IDI2Q9BXS1 227 aa11.26□□□□□ -0.61
GARNL3-219ENST00000495172 STARD7Q9NQZ5 370 aa11.26□□□□□ -0.61
GARNL3-219ENST00000495172 ACLYP53396 1101 aa11.25□□□□□ -0.61
GARNL3-219ENST00000495172 KCTD2Q14681 263 aa11.25□□□□□ -0.61
GARNL3-219ENST00000495172 CAVIN4Q5BKX8 364 aa11.25□□□□□ -0.61
GARNL3-219ENST00000495172 CCDC174Q6PII3 467 aa11.25□□□□□ -0.61
GARNL3-219ENST00000495172 ATOH1Q92858 354 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-219ENST00000495172 TOX2Q96NM4 488 aa11.25□□□□□ -0.61
GARNL3-219ENST00000495172 EMILIN3Q9NT22 766 aa11.25□□□□□ -0.61
GARNL3-219ENST00000495172 SLC4A7Q9Y6M7 1214 aa11.25□□□□□ -0.61
GARNL3-219ENST00000495172 IVNS1ABPQ9Y6Y0 642 aa11.25□□□□□ -0.61
GARNL3-219ENST00000495172 GAKO14976 1311 aa11.25□□□□□ -0.61
GARNL3-219ENST00000495172 SPTBN2O15020 2390 aa11.24□□□□□ -0.61
GARNL3-219ENST00000495172 SIPA1L1O43166 1804 aa11.24□□□□□ -0.61
GARNL3-219ENST00000495172 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.24□□□□□ -0.61
GARNL3-219ENST00000495172 GRXCR2A6NFK2 248 aa11.24□□□□□ -0.61
GARNL3-219ENST00000495172 H0Y858 1186 aa11.24□□□□□ -0.61
GARNL3-219ENST00000495172 GLRX3O76003 335 aaKnown RBP11.24□□□□□ -0.61
GARNL3-219ENST00000495172 ATP2A2P16615 1042 aaKnown RBP11.24□□□□□ -0.61
GARNL3-219ENST00000495172 ZEB1P37275 1124 aaPredicted RBP11.24□□□□□ -0.61
GARNL3-219ENST00000495172 VCPP55072 806 aaKnown RBP11.24□□□□□ -0.61
GARNL3-219ENST00000495172 TTLL4Q14679 1199 aa11.24□□□□□ -0.61
GARNL3-219ENST00000495172 LEXMQ3ZCV2 418 aa11.24□□□□□ -0.61
GARNL3-219ENST00000495172 TMEM67Q5HYA8 995 aa11.24□□□□□ -0.61
GARNL3-219ENST00000495172 OLFML2BQ68BL8 750 aa11.24□□□□□ -0.61
GARNL3-219ENST00000495172 CDCA7LQ96GN5 454 aa11.24□□□□□ -0.61
GARNL3-219ENST00000495172 OSBPL5Q9H0X9 879 aaPredicted RBP11.24□□□□□ -0.61
GARNL3-219ENST00000495172 TLR9Q9NR96 1032 aa11.24□□□□□ -0.61
GARNL3-219ENST00000495172 SUGT1Q9Y2Z0 365 aa11.24□□□□□ -0.61
GARNL3-219ENST00000495172 USP24Q9UPU5 2620 aa11.23□□□□□ -0.61
GARNL3-219ENST00000495172 SCN5AQ14524 2016 aa11.23□□□□□ -0.61
GARNL3-219ENST00000495172 GDF11O95390 407 aa11.23□□□□□ -0.61
GARNL3-219ENST00000495172 RARBP10826 455 aa11.23□□□□□ -0.61
GARNL3-219ENST00000495172 IRS1P35568 1242 aa11.23□□□□□ -0.61
GARNL3-219ENST00000495172 ZP2Q05996 745 aa11.23□□□□□ -0.61
GARNL3-219ENST00000495172 RNF180Q86T96 592 aa11.23□□□□□ -0.61
GARNL3-219ENST00000495172 SCLYQ96I15 445 aa11.23□□□□□ -0.61
GARNL3-219ENST00000495172 MTUS1Q9ULD2 1270 aa11.23□□□□□ -0.61
GARNL3-219ENST00000495172 TRPC6Q9Y210 931 aa11.23□□□□□ -0.61
GARNL3-219ENST00000495172 RABGAP1Q9Y3P9 1069 aa11.23□□□□□ -0.61
GARNL3-219ENST00000495172 LCHNA4D1U4 455 aa11.22□□□□□ -0.61
GARNL3-219ENST00000495172 ZNF536O15090 1300 aa11.22□□□□□ -0.61
GARNL3-219ENST00000495172 ADAMTS4O75173 837 aa11.22□□□□□ -0.61
GARNL3-219ENST00000495172 LDHBP07195 334 aaKnown RBP11.22□□□□□ -0.61
GARNL3-219ENST00000495172 CDK7P50613 346 aa11.22□□□□□ -0.61
GARNL3-219ENST00000495172 KCNA10Q16322 511 aa11.22□□□□□ -0.61
GARNL3-219ENST00000495172 METTL24Q5JXM2 366 aa11.22□□□□□ -0.61
GARNL3-219ENST00000495172 CCDC30Q5VVM6 783 aa11.22□□□□□ -0.61
GARNL3-219ENST00000495172 TMCO2Q7Z6W1 182 aaPredicted RBP11.22□□□□□ -0.61
GARNL3-219ENST00000495172 VGLL2Q8N8G2 317 aa11.22□□□□□ -0.61
GARNL3-219ENST00000495172 KLHDC4Q8TBB5 520 aa11.22□□□□□ -0.61
GARNL3-219ENST00000495172 WDR18Q9BV38 432 aa11.22□□□□□ -0.61
GARNL3-219ENST00000495172 WNT8AQ9H1J5 351 aa11.22□□□□□ -0.61
GARNL3-219ENST00000495172 PTPRSQ13332 1948 aa11.21□□□□□ -0.61
GARNL3-219ENST00000495172 ZNFX1Q9P2E3 1918 aaKnown RBP11.21□□□□□ -0.61
GARNL3-219ENST00000495172 SYNRGQ9UMZ2 1314 aa11.21□□□□□ -0.61
GARNL3-219ENST00000495172 PRR23AA6NEV1 266 aa11.21□□□□□ -0.61
GARNL3-219ENST00000495172 TBC1D12O60347 775 aa11.21□□□□□ -0.61
GARNL3-219ENST00000495172 ZNF853P0CG23 659 aa11.21□□□□□ -0.61
GARNL3-219ENST00000495172 BTDP43251 543 aa11.21□□□□□ -0.61
GARNL3-219ENST00000495172 FAM126BQ8IXS8 530 aa11.21□□□□□ -0.61
GARNL3-219ENST00000495172 WDR66Q8TBY9 1149 aa11.21□□□□□ -0.61
GARNL3-219ENST00000495172 VTI1AQ96AJ9 217 aa11.21□□□□□ -0.61
GARNL3-219ENST00000495172 PBXIP1Q96AQ6 731 aa11.21□□□□□ -0.61
GARNL3-219ENST00000495172 MTIF3Q9H2K0 278 aaKnown RBP11.21□□□□□ -0.61
GARNL3-219ENST00000495172 PNNQ9H307 717 aaKnown RBP11.21□□□□□ -0.61
GARNL3-219ENST00000495172 AS3MTQ9HBK9 375 aa11.21□□□□□ -0.61
GARNL3-219ENST00000495172 CDK5RAP2Q96SN8 1893 aa11.21□□□□□ -0.62
GARNL3-219ENST00000495172 ZNF236Q9UL36 1845 aa11.21□□□□□ -0.62
GARNL3-219ENST00000495172 FASNP49327 2511 aaKnown RBP11.2□□□□□ -0.62
GARNL3-219ENST00000495172 USP17L10C9JJH3 530 aa11.2□□□□□ -0.62
GARNL3-219ENST00000495172 F6X3S4 739 aa11.2□□□□□ -0.62
GARNL3-219ENST00000495172 HOXB3P14651 431 aaPredicted RBP11.2□□□□□ -0.62
GARNL3-219ENST00000495172 CCNA1P78396 465 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms