RNA–Protein interactions for RNA: ENST00000494746.1

CALCA-206, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 1,837 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-206ENST00000494746 AS3MTQ9HBK9 375 aa11.3□□□□□ -0.6
CALCA-206ENST00000494746 NYAP2Q9P242 653 aa11.3□□□□□ -0.6
CALCA-206ENST00000494746 KCNH4Q9UQ05 1017 aa11.3□□□□□ -0.6
CALCA-206ENST00000494746 CYP46A1Q9Y6A2 500 aa11.3□□□□□ -0.6
CALCA-206ENST00000494746 WDR19Q8NEZ3 1342 aa11.29□□□□□ -0.6
CALCA-206ENST00000494746 USP17L10C9JJH3 530 aa11.29□□□□□ -0.6
CALCA-206ENST00000494746 HSP90AA1P07900 732 aaKnown RBP11.29□□□□□ -0.6
CALCA-206ENST00000494746 HMGCS2P54868 508 aa11.29□□□□□ -0.6
CALCA-206ENST00000494746 BACE1P56817 501 aa11.29□□□□□ -0.6
CALCA-206ENST00000494746 HSP90AA2PQ14568 343 aaPredicted RBP11.29□□□□□ -0.6
CALCA-206ENST00000494746 SART3Q15020 963 aaKnown RBP11.29□□□□□ -0.6
CALCA-206ENST00000494746 KIAA1755Q5JYT7 1200 aa11.29□□□□□ -0.6
CALCA-206ENST00000494746 IFIT1BQ5T764 474 aaKnown RBP11.29□□□□□ -0.6
CALCA-206ENST00000494746 DGKHQ86XP1 1220 aa11.29□□□□□ -0.6
CALCA-206ENST00000494746 MKL1Q969V6 931 aa11.29□□□□□ -0.6
CALCA-206ENST00000494746 TMEM87BQ96K49 555 aa11.29□□□□□ -0.6
CALCA-206ENST00000494746 FEZ1Q99689 392 aa11.29□□□□□ -0.6
CALCA-206ENST00000494746 ARHGEF10LQ9HCE6 1279 aa11.29□□□□□ -0.6
CALCA-206ENST00000494746 TMX2Q9Y320 296 aa11.29□□□□□ -0.6
CALCA-206ENST00000494746 A0A0G2JLL6 359 aaPredicted RBP11.28□□□□□ -0.6
CALCA-206ENST00000494746 WTAPQ15007 396 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 DEFB115Q30KQ5 88 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 Q6ZUG5 572 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 PRRT2Q7Z6L0 340 aaPredicted RBP11.28□□□□□ -0.6
CALCA-206ENST00000494746 SPICE1Q8N0Z3 855 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 ANKS1AQ92625 1134 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 CHMP4CQ96CF2 233 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 MS4A4AQ96JQ5 239 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 TTC14Q96N46 770 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 ZIC5Q96T25 663 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 MTA3Q9BTC8 594 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 TBC1D2Q9BYX2 928 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 KIAA1683Q9H0B3 1180 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 CENPFP49454 3210 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 ERICH2A1L162 156 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 RAD21O60216 631 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 TOP1P11387 765 aaKnown RBP11.28□□□□□ -0.6
CALCA-206ENST00000494746 NEK4P51957 841 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 MOGSQ13724 837 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 TOB2Q14106 344 aaPredicted RBP11.28□□□□□ -0.6
CALCA-206ENST00000494746 PNMA1Q8ND90 353 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 CCDC102AQ96A19 550 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 CAPNS2Q96L46 248 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 AGXT2Q9BYV1 514 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 SH2D4AQ9H788 454 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 VCPKMTQ9H867 229 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 EMILIN3Q9NT22 766 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 MTMR7Q9Y216 660 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 THSD7BQ9C0I4 1608 aa11.28□□□□□ -0.6
CALCA-206ENST00000494746 PARP14Q460N5 1801 aa11.27□□□□□ -0.6
CALCA-206ENST00000494746 BAZ2BQ9UIF8 2168 aaKnown RBP11.27□□□□□ -0.61
CALCA-206ENST00000494746 CXCL11O14625 94 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 AOC2O75106 756 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 NDUFB10O96000 172 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 LIFRP42702 1097 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 FGD1P98174 961 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 SNAPC2Q13487 334 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 CCDC178Q5BJE1 867 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 PPP4R3BQ5MIZ7 849 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 SGMS1Q86VZ5 419 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 FBXL16Q8N461 479 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 BRF1Q92994 677 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.61
CALCA-206ENST00000494746 MYL10Q9BUA6 226 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 KAT14Q9H8E8 782 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 PDRG1Q9NUG6 133 aa11.27□□□□□ -0.61
CALCA-206ENST00000494746 RLFQ13129 1914 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 F5H6K3 240 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 VCAM1P19320 739 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 VEGFBP49765 207 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 GTF2A2P52657 109 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 USP14P54578 494 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 KLRC3Q07444 240 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 SH3D19Q5HYK7 790 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 TREML2Q5T2D2 321 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 GMCL1P1Q8NEA9 526 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 BRI3BPQ8WY22 251 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 C12orf42Q96LP6 360 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 NUP88Q99567 741 aaPredicted RBP11.26□□□□□ -0.61
CALCA-206ENST00000494746 GOPCQ9HD26 462 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 SYNPO2Q9UMS6 1093 aa11.26□□□□□ -0.61
CALCA-206ENST00000494746 CCL15-CCL14A0A0B4J2E2 113 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 C19orf81C9J6K1 198 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 PDHBP11177 359 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 RXRAP19793 462 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 AK2P54819 239 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 APOBRQ0VD83 1088 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 TROAPQ12815 778 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 RABEP1Q15276 862 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 CCL15Q16663 113 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 USP17L2Q6R6M4 530 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 NFXL1Q6ZNB6 911 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 RAB11FIP4Q86YS3 637 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 ZNF654Q8IZM8 581 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 PTPN18Q99952 460 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 RRAGDQ9NQL2 400 aaPredicted RBP11.25□□□□□ -0.61
CALCA-206ENST00000494746 WDR33Q9C0J8 1336 aaKnown RBP11.25□□□□□ -0.61
CALCA-206ENST00000494746 CD2BP2O95400 341 aaKnown RBP11.25□□□□□ -0.61
CALCA-206ENST00000494746 SNHG28P0DPA3 235 aa11.25□□□□□ -0.61
CALCA-206ENST00000494746 CETPP11597 493 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms