RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 ASCC2Q9H1I8 757 aaPredicted RBP8.6□□□□□ -1.03
NCL-210ENST00000494618 ANTXR1Q9H6X2 564 aa8.6□□□□□ -1.03
NCL-210ENST00000494618 COL17A1Q9UMD9 1497 aaPredicted RBP8.59□□□□□ -1.03
NCL-210ENST00000494618 TNFRSF10CO14798 259 aa8.59□□□□□ -1.03
NCL-210ENST00000494618 CLEC3AO75596 197 aa8.59□□□□□ -1.03
NCL-210ENST00000494618 TCF3P15923 654 aa8.59□□□□□ -1.03
NCL-210ENST00000494618 ERCC5P28715 1186 aaPredicted RBP8.59□□□□□ -1.03
NCL-210ENST00000494618 INTS3Q68E01 1043 aaKnown RBP8.59□□□□□ -1.03
NCL-210ENST00000494618 GPR62Q9BZJ7 368 aa8.59□□□□□ -1.03
NCL-210ENST00000494618 GINM1Q9NU53 330 aa8.59□□□□□ -1.03
NCL-210ENST00000494618 EFR3BQ9Y2G0 817 aa8.59□□□□□ -1.03
NCL-210ENST00000494618 INPP5FQ9Y2H2 1132 aa8.59□□□□□ -1.03
NCL-210ENST00000494618 TAL1P17542 331 aaPredicted RBP8.58□□□□□ -1.04
NCL-210ENST00000494618 TPP2P29144 1249 aaPredicted RBP8.58□□□□□ -1.04
NCL-210ENST00000494618 POLR2BP30876 1174 aaKnown RBP8.58□□□□□ -1.04
NCL-210ENST00000494618 GJA8P48165 433 aa8.58□□□□□ -1.04
NCL-210ENST00000494618 CBLL1Q75N03 491 aa8.58□□□□□ -1.04
NCL-210ENST00000494618 TM9SF2Q99805 663 aa8.58□□□□□ -1.04
NCL-210ENST00000494618 DUSP15Q9H1R2 295 aaPredicted RBP8.58□□□□□ -1.04
NCL-210ENST00000494618 CARS2Q9HA77 564 aaKnown RBP8.58□□□□□ -1.04
NCL-210ENST00000494618 PPT2Q9UMR5 302 aa8.58□□□□□ -1.04
NCL-210ENST00000494618 E9PSI1 815 aa8.57□□□□□ -1.04
NCL-210ENST00000494618 BIN1O00499 593 aa8.57□□□□□ -1.04
NCL-210ENST00000494618 LRRN2O75325 713 aa8.57□□□□□ -1.04
NCL-210ENST00000494618 RNASE1P07998 156 aaKnown RBP8.57□□□□□ -1.04
NCL-210ENST00000494618 CLEC16AQ2KHT3 1053 aa8.57□□□□□ -1.04
NCL-210ENST00000494618 MCTP1Q6DN14 999 aa8.57□□□□□ -1.04
NCL-210ENST00000494618 RBBP8NLQ8NC74 664 aaPredicted RBP8.57□□□□□ -1.04
NCL-210ENST00000494618 VWCEQ96DN2 955 aa8.57□□□□□ -1.04
NCL-210ENST00000494618 DHRS1Q96LJ7 313 aa8.57□□□□□ -1.04
NCL-210ENST00000494618 ACBD3Q9H3P7 528 aa8.57□□□□□ -1.04
NCL-210ENST00000494618 RC3H2Q9HBD1 1191 aaKnown RBP8.57□□□□□ -1.04
NCL-210ENST00000494618 MBNL3Q9NUK0 354 aaKnown RBP8.57□□□□□ -1.04
NCL-210ENST00000494618 SRFP11831 508 aa8.56□□□□□ -1.04
NCL-210ENST00000494618 SOX9P48436 509 aa8.56□□□□□ -1.04
NCL-210ENST00000494618 NBPF12Q5TAG4 269 aaPredicted RBP8.56□□□□□ -1.04
NCL-210ENST00000494618 TSPYL5Q86VY4 417 aaPredicted RBP8.56□□□□□ -1.04
NCL-210ENST00000494618 TAB3Q8N5C8 712 aaPredicted RBP8.56□□□□□ -1.04
NCL-210ENST00000494618 CCDC120Q96HB5 630 aa8.56□□□□□ -1.04
NCL-210ENST00000494618 SLC9A7Q96T83 725 aa8.56□□□□□ -1.04
NCL-210ENST00000494618 EIF6P56537 245 aaKnown RBP8.55□□□□□ -1.04
NCL-210ENST00000494618 VPS37DQ86XT2 251 aa8.55□□□□□ -1.04
NCL-210ENST00000494618 CREG2Q8IUH2 290 aa8.55□□□□□ -1.04
NCL-210ENST00000494618 ENOX1Q8TC92 643 aaKnown RBP8.55□□□□□ -1.04
NCL-210ENST00000494618 SEC16BQ96JE7 1060 aa8.55□□□□□ -1.04
NCL-210ENST00000494618 SLC6A18Q96N87 628 aa8.55□□□□□ -1.04
NCL-210ENST00000494618 PRDM7Q9NQW5 492 aa8.55□□□□□ -1.04
NCL-210ENST00000494618 DUSP13Q9UII6 198 aa8.55□□□□□ -1.04
NCL-210ENST00000494618 ADAMTS6Q9UKP5 1117 aa8.55□□□□□ -1.04
NCL-210ENST00000494618 JUNBP17275 347 aaPredicted RBP8.54□□□□□ -1.04
NCL-210ENST00000494618 GNL2Q13823 731 aaKnown RBP8.54□□□□□ -1.04
NCL-210ENST00000494618 CPLX3Q8WVH0 158 aa8.54□□□□□ -1.04
NCL-210ENST00000494618 SYTL4Q96C24 671 aaPredicted RBP8.54□□□□□ -1.04
NCL-210ENST00000494618 SRRTQ9BXP5 876 aaKnown RBP8.54□□□□□ -1.04
NCL-210ENST00000494618 RBAK-RBAKDNI3L0D1 243 aa8.53□□□□□ -1.04
NCL-210ENST00000494618 GUCY2CP25092 1073 aa8.53□□□□□ -1.04
NCL-210ENST00000494618 NASPP49321 788 aaPredicted RBP8.53□□□□□ -1.04
NCL-210ENST00000494618 NBPF9Q3BBW0 867 aa8.53□□□□□ -1.04
NCL-210ENST00000494618 CCDC81Q6ZN84 652 aa8.53□□□□□ -1.04
NCL-210ENST00000494618 ATG4DQ86TL0 474 aaPredicted RBP8.53□□□□□ -1.04
NCL-210ENST00000494618 TMEM192Q8IY95 271 aa8.53□□□□□ -1.04
NCL-210ENST00000494618 LRRN4CLQ8ND94 238 aa8.53□□□□□ -1.04
NCL-210ENST00000494618 OR6P1Q8NGX9 317 aa8.53□□□□□ -1.04
NCL-210ENST00000494618 MKRN2Q9H000 416 aaKnown RBP8.53□□□□□ -1.04
NCL-210ENST00000494618 ESR1P03372 595 aa8.52□□□□□ -1.05
NCL-210ENST00000494618 LTKP29376 864 aa8.52□□□□□ -1.05
NCL-210ENST00000494618 NMIQ13287 307 aaPredicted RBP8.52□□□□□ -1.05
NCL-210ENST00000494618 GAB4Q2WGN9 574 aa8.52□□□□□ -1.05
NCL-210ENST00000494618 LSRQ86X29 649 aaPredicted RBP8.52□□□□□ -1.05
NCL-210ENST00000494618 ALPK1Q96QP1 1244 aa8.52□□□□□ -1.05
NCL-210ENST00000494618 CAPN10Q9HC96 672 aa8.52□□□□□ -1.05
NCL-210ENST00000494618 SUCOQ9UBS9 1254 aaKnown RBP8.52□□□□□ -1.05
NCL-210ENST00000494618 STRIP2Q9ULQ0 834 aa8.52□□□□□ -1.05
NCL-210ENST00000494618 SLC12A7Q9Y666 1083 aa8.52□□□□□ -1.05
NCL-210ENST00000494618 FAM86C2PA6NEL3 165 aa8.51□□□□□ -1.05
NCL-210ENST00000494618 WASH4PA8MWX3 477 aa8.51□□□□□ -1.05
NCL-210ENST00000494618 PAX4O43316 350 aa8.51□□□□□ -1.05
NCL-210ENST00000494618 ACRP10323 421 aa8.51□□□□□ -1.05
NCL-210ENST00000494618 ASIC4Q96FT7 647 aa8.51□□□□□ -1.05
NCL-210ENST00000494618 ZNF512BQ96KM6 892 aaPredicted RBP8.51□□□□□ -1.05
NCL-210ENST00000494618 GIPRP48546 466 aa8.5□□□□□ -1.05
NCL-210ENST00000494618 EGR3Q06889 387 aa8.5□□□□□ -1.05
NCL-210ENST00000494618 UNC5AQ6ZN44 842 aa8.5□□□□□ -1.05
NCL-210ENST00000494618 SYTL5Q8TDW5 730 aaPredicted RBP8.5□□□□□ -1.05
NCL-210ENST00000494618 SMARCC1Q92922 1105 aaPredicted RBP8.5□□□□□ -1.05
NCL-210ENST00000494618 SLAMF8Q9P0V8 285 aa8.5□□□□□ -1.05
NCL-210ENST00000494618 FBXL21Q9UKT6 434 aa8.5□□□□□ -1.05
NCL-210ENST00000494618 PCDHB12Q9Y5F1 795 aa8.5□□□□□ -1.05
NCL-210ENST00000494618 SHISA3A0PJX4 238 aa8.49□□□□□ -1.05
NCL-210ENST00000494618 ITGB5P18084 799 aa8.49□□□□□ -1.05
NCL-210ENST00000494618 GDNFP39905 211 aa8.49□□□□□ -1.05
NCL-210ENST00000494618 AFMP43652 599 aa8.49□□□□□ -1.05
NCL-210ENST00000494618 PMS1P54277 932 aaKnown RBP8.49□□□□□ -1.05
NCL-210ENST00000494618 BBS9Q3SYG4 887 aa8.49□□□□□ -1.05
NCL-210ENST00000494618 RUFY4Q6ZNE9 571 aa8.49□□□□□ -1.05
NCL-210ENST00000494618 CCDC144CPQ8IYA2 1237 aa8.49□□□□□ -1.05
NCL-210ENST00000494618 DAGLBQ8NCG7 672 aa8.49□□□□□ -1.05
NCL-210ENST00000494618 FLAD1Q8NFF5 587 aa8.49□□□□□ -1.05
NCL-210ENST00000494618 SSU72P8A0A1W2PR75 194 aa8.48□□□□□ -1.05
NCL-210ENST00000494618 ATF4P18848 351 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms