RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 HSP90AB1P08238 724 aaKnown RBP8.2□□□□□ -1.1
SNX13-210ENST00000494402 MYBL2P10244 700 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 FLT3P36888 993 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 IREB2P48200 963 aaKnown RBP8.2□□□□□ -1.1
SNX13-210ENST00000494402 HSP90AA2PQ14568 343 aaPredicted RBP8.2□□□□□ -1.1
SNX13-210ENST00000494402 CDC37Q16543 378 aaPredicted RBP8.2□□□□□ -1.1
SNX13-210ENST00000494402 NBPF1Q3BBV0 1214 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 TRIM61Q5EBN2 209 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 TMEM214Q6NUQ4 689 aaKnown RBP8.2□□□□□ -1.1
SNX13-210ENST00000494402 LRRC69Q6ZNQ3 347 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 BTLAQ7Z6A9 289 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 TRIM22Q8IYM9 498 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 POF1BQ8WVV4 589 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 FUBP3Q96I24 572 aaKnown RBP eCLIP8.2□□□□□ -1.1
SNX13-210ENST00000494402 TRERF1Q96PN7 1200 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 CDK15Q96Q40 435 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 ZSCAN10Q96SZ4 725 aaPredicted RBP8.2□□□□□ -1.1
SNX13-210ENST00000494402 ALDH8A1Q9H2A2 487 aaPredicted RBP8.2□□□□□ -1.1
SNX13-210ENST00000494402 TRIM39Q9HCM9 518 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 SAGE1Q9NXZ1 904 aa8.2□□□□□ -1.1
SNX13-210ENST00000494402 hCG_1984214I3L0E3 225 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 ASLP04424 464 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 VCAM1P19320 739 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 ITPKAP23677 461 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 RBM10P98175 930 aaKnown RBP8.19□□□□□ -1.1
SNX13-210ENST00000494402 NUCB1Q02818 461 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 GALEQ14376 348 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 PDCD2Q16342 344 aaPredicted RBP8.19□□□□□ -1.1
SNX13-210ENST00000494402 KIAA1211LQ6NV74 962 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 MZT2BQ6NZ67 158 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 SPATA5Q8NB90 893 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 C7orf43Q8WVR3 580 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 TMEM40Q8WWA1 233 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 HSH2DQ96JZ2 352 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 NLRP3Q96P20 1036 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 SERINC2Q96SA4 455 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 AARSD1Q9BTE6 412 aaKnown RBP8.19□□□□□ -1.1
SNX13-210ENST00000494402 MTFR1LQ9H019 292 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 ANLNQ9NQW6 1124 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 ZDHHC3Q9NYG2 299 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 KANSL3Q9P2N6 904 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 DDX20Q9UHI6 824 aaKnown RBP8.19□□□□□ -1.1
SNX13-210ENST00000494402 GPN3Q9UHW5 284 aaPredicted RBP8.19□□□□□ -1.1
SNX13-210ENST00000494402 SALL4Q9UJQ4 1053 aa8.19□□□□□ -1.1
SNX13-210ENST00000494402 TNPO3Q9Y5L0 923 aaKnown RBP8.19□□□□□ -1.1
SNX13-210ENST00000494402 A0A1W2PQU0 124 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 DHX16O60231 1041 aaKnown RBP8.18□□□□□ -1.1
SNX13-210ENST00000494402 EGFRP00533 1210 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 ASGR2P07307 311 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 SLC5A1P13866 664 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 IQSEC1Q6DN90 963 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 CYB5RLQ6IPT4 315 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 IL17REQ8NFR9 667 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 TRIM63Q969Q1 353 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 PGBD4Q96DM1 585 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 LRGUKQ96M69 825 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 NUP88Q99567 741 aaPredicted RBP8.18□□□□□ -1.1
SNX13-210ENST00000494402 ANTXR1Q9H6X2 564 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 C1orf112Q9NSG2 853 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 CYP8B1Q9UNU6 501 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 SLC45A1Q9Y2W3 748 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 NUB1Q9Y5A7 615 aa8.18□□□□□ -1.1
SNX13-210ENST00000494402 PHF20L1A8MW92 1017 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 K7ESF4 209 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 PRKD3O94806 890 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 LTFP02788 710 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 ADH1AP07327 375 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 GRM5P41594 1212 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 ECE1P42892 770 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 ID4P47928 161 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 RPL6Q02878 288 aaKnown RBP8.17□□□□□ -1.1
SNX13-210ENST00000494402 RGL3Q3MIN7 710 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 SV2CQ496J9 727 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 RPS26P11Q5JNZ5 115 aaPredicted RBP8.17□□□□□ -1.1
SNX13-210ENST00000494402 YOD1Q5VVQ6 348 aaPredicted RBP8.17□□□□□ -1.1
SNX13-210ENST00000494402 TSHZ3Q63HK5 1081 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 UNC5AQ6ZN44 842 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 CBARPQ8N350 705 aaPredicted RBP8.17□□□□□ -1.1
SNX13-210ENST00000494402 CCT6BQ92526 530 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 RIC8AQ9NPQ8 531 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 TRMT13Q9NUP7 481 aaKnown RBP8.17□□□□□ -1.1
SNX13-210ENST00000494402 KCNG1Q9UIX4 513 aa8.17□□□□□ -1.1
SNX13-210ENST00000494402 POLR3KQ9Y2Y1 108 aaPredicted RBP8.17□□□□□ -1.1
SNX13-210ENST00000494402 J3KRW8 73 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 GRIN3BO60391 1043 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 EFCAB14O75071 495 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 MAP3K6O95382 1288 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 CYP2E1P05181 493 aaPredicted RBP8.16□□□□□ -1.1
SNX13-210ENST00000494402 NAT2P11245 290 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 ZKSCAN1P17029 563 aaPredicted RBP8.16□□□□□ -1.1
SNX13-210ENST00000494402 IGFALSP35858 605 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 PLA2G4AP47712 749 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 SCNN1BP51168 640 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 SLC7A5Q01650 507 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 FAPQ12884 760 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 LRRC14Q15048 493 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 WASHC2AQ641Q2 1341 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 BRAPQ7Z569 592 aa8.16□□□□□ -1.1
SNX13-210ENST00000494402 CATIPQ7Z7H3 387 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms