RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 MMP1P03956 469 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 IFNAR1P17181 557 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 TAL1P17542 331 aaPredicted RBP10.55□□□□□ -0.72
MINDY4-203ENST00000494187 CHMP4BP1P59074 171 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 PPARDQ03181 441 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 EN1Q05925 392 aaPredicted RBP10.55□□□□□ -0.72
MINDY4-203ENST00000494187 GRAPQ13588 217 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 CEP135Q66GS9 1140 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 DTHD1Q6ZMT9 781 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 C2CD5Q86YS7 1000 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 SRBD1Q8N5C6 995 aaKnown RBP10.55□□□□□ -0.72
MINDY4-203ENST00000494187 GRAPLQ8TC17 118 aaPredicted RBP10.55□□□□□ -0.72
MINDY4-203ENST00000494187 CCDC47Q96A33 483 aaKnown RBP10.55□□□□□ -0.72
MINDY4-203ENST00000494187 PIGSQ96S52 555 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 BCL2L12Q9HB09 334 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 ZNF287Q9HBT7 754 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 ATF5Q9Y2D1 282 aaPredicted RBP10.55□□□□□ -0.72
MINDY4-203ENST00000494187 XDHP47989 1333 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 RTL9Q8NET4 1388 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 TMEM232C9JQI7 657 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 HLA-DOAP06340 250 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 SCG2P13521 617 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 FGFR2P21802 821 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 GNG11P61952 73 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 MYL5Q02045 173 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 EARS2Q5JPH6 523 aaKnown RBP10.55□□□□□ -0.72
MINDY4-203ENST00000494187 CPXCR1Q8N123 301 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 TAB2Q9NYJ8 693 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 GJA3Q9Y6H8 435 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 MROH7-TTC4A0A0A0MT08 1334 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
MINDY4-203ENST00000494187 UBE2SQ16763 222 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 FKBP15Q5T1M5 1219 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 PCDHAC2Q9Y5I4 1007 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 TACC3Q9Y6A5 838 aa10.55□□□□□ -0.72
MINDY4-203ENST00000494187 USP27XA6NNY8 438 aa10.54□□□□□ -0.72
MINDY4-203ENST00000494187 PPIP5K2O43314 1243 aa10.54□□□□□ -0.72
MINDY4-203ENST00000494187 CMA1P23946 247 aa10.54□□□□□ -0.72
MINDY4-203ENST00000494187 SNW1Q13573 536 aaKnown RBP10.54□□□□□ -0.72
MINDY4-203ENST00000494187 VGLL3A8MV65 326 aa10.54□□□□□ -0.72
MINDY4-203ENST00000494187 MTIF2P46199 727 aaKnown RBP10.54□□□□□ -0.72
MINDY4-203ENST00000494187 KRBA2Q6ZNG9 492 aa10.54□□□□□ -0.72
MINDY4-203ENST00000494187 FMR1NBQ8N0W7 255 aaPredicted RBP10.54□□□□□ -0.72
MINDY4-203ENST00000494187 RRP36Q96EU6 259 aaKnown RBP10.54□□□□□ -0.72
MINDY4-203ENST00000494187 CCDC43Q96MW1 224 aaKnown RBP10.54□□□□□ -0.72
MINDY4-203ENST00000494187 TMOD2Q9NZR1 351 aa10.54□□□□□ -0.72
MINDY4-203ENST00000494187 TNS2Q63HR2 1409 aa10.54□□□□□ -0.72
MINDY4-203ENST00000494187 PPEF1O14829 653 aaPredicted RBP10.54□□□□□ -0.72
MINDY4-203ENST00000494187 CUTAO60888 179 aa10.54□□□□□ -0.72
MINDY4-203ENST00000494187 TEX35Q5T0J7 233 aa10.54□□□□□ -0.72
MINDY4-203ENST00000494187 TMEM87AQ8NBN3 555 aa10.54□□□□□ -0.72
MINDY4-203ENST00000494187 KCNB2Q92953 911 aa10.54□□□□□ -0.72
MINDY4-203ENST00000494187 HPS3Q969F9 1004 aa10.54□□□□□ -0.72
MINDY4-203ENST00000494187 TMEM260Q9NX78 707 aa10.54□□□□□ -0.72
MINDY4-203ENST00000494187 TOPAZ1Q8N9V7 1692 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 TCRBV5S4A2TA0A5A2 114 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 USP17L5A8MUK1 530 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 H0YIN7 160 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 DDX39AO00148 427 aaKnown RBP10.53□□□□□ -0.72
MINDY4-203ENST00000494187 IPO7O95373 1038 aaKnown RBP10.53□□□□□ -0.72
MINDY4-203ENST00000494187 EPS15P42566 896 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 CDK8P49336 464 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 VPS72Q15906 364 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 LARGE2Q8N3Y3 721 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 DPF2Q92785 391 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 CEP95Q96GE4 821 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 TDRD3Q9H7E2 651 aaKnown RBP10.53□□□□□ -0.72
MINDY4-203ENST00000494187 LIFRP42702 1097 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 SLC1A4P43007 532 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 NLRP12P59046 1061 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 PTPROQ16827 1216 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 TCERG1LQ5VWI1 586 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.53□□□□□ -0.72
MINDY4-203ENST00000494187 STAG1Q8WVM7 1258 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 POLR3EQ9NVU0 708 aa10.53□□□□□ -0.72
MINDY4-203ENST00000494187 ZBTB12Q9Y330 459 aaPredicted RBP10.53□□□□□ -0.72
MINDY4-203ENST00000494187 ARHGAP29Q52LW3 1261 aa10.52□□□□□ -0.72
MINDY4-203ENST00000494187 WDR78Q5VTH9 848 aa10.52□□□□□ -0.72
MINDY4-203ENST00000494187 TTBK2Q6IQ55 1244 aa10.52□□□□□ -0.72
MINDY4-203ENST00000494187 CCDC174Q6PII3 467 aa10.52□□□□□ -0.72
MINDY4-203ENST00000494187 MTERF4Q7Z6M4 381 aaKnown RBP10.52□□□□□ -0.72
MINDY4-203ENST00000494187 DEFB132Q7Z7B7 95 aa10.52□□□□□ -0.72
MINDY4-203ENST00000494187 BLIDQ8IZY5 108 aa10.52□□□□□ -0.72
MINDY4-203ENST00000494187 TMEM47Q9BQJ4 181 aa10.52□□□□□ -0.72
MINDY4-203ENST00000494187 TAF3Q5VWG9 929 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 NELFCDQ8IXH7 590 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 CNPY4Q8N129 248 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 KCNF1Q9H3M0 494 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 PLEKHA4Q9H4M7 779 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 ARPP21Q9UBL0 812 aaPredicted RBP10.52□□□□□ -0.73
MINDY4-203ENST00000494187 POLLQ9UGP5 575 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 ZBTB7AO95365 584 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 SF3B3Q15393 1217 aaKnown RBP10.52□□□□□ -0.73
MINDY4-203ENST00000494187 AOC3Q16853 763 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 SLC30A10Q6XR72 485 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 SLF2Q8IX21 1173 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 PDCL2Q8N4E4 241 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 OGFOD1Q8N543 542 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 IQUBQ8NA54 791 aa10.52□□□□□ -0.73
MINDY4-203ENST00000494187 DEF6Q9H4E7 631 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms