RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 MAP4K1Q92918 833 aa21.22■□□□□ 0.99
COL27A1-207ENST00000494090 ADKP55263 362 aaKnown RBP21.22■□□□□ 0.99
COL27A1-207ENST00000494090 IFNL3Q8IZI9 196 aa21.22■□□□□ 0.99
COL27A1-207ENST00000494090 SEC62Q99442 399 aaKnown RBP21.22■□□□□ 0.99
COL27A1-207ENST00000494090 PHKG2P15735 406 aa21.22■□□□□ 0.99
COL27A1-207ENST00000494090 YWHAEP62258 255 aaKnown RBP21.22■□□□□ 0.99
COL27A1-207ENST00000494090 STAMQ92783 540 aa21.22■□□□□ 0.99
COL27A1-207ENST00000494090 VIMP08670 466 aaKnown RBP21.22■□□□□ 0.99
COL27A1-207ENST00000494090 REXO1Q8N1G1 1221 aaKnown RBP21.22■□□□□ 0.99
COL27A1-207ENST00000494090 CCT6BQ92526 530 aa21.22■□□□□ 0.99
COL27A1-207ENST00000494090 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 KDM3AQ9Y4C1 1321 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 hCG_1642624A0A1W2PR95 340 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 M0QZ92 97 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 CEP104O60308 925 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 NLRX1Q86UT6 975 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 AS3MTQ9HBK9 375 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 PCDHA7Q9UN72 937 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 DAPK3O43293 454 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 WHAMMP3Q1A5X7 153 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 ZSCAN10Q96SZ4 725 aaPredicted RBP21.21■□□□□ 0.99
COL27A1-207ENST00000494090 ATP8A2Q9NTI2 1148 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 GNA14O95837 355 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 BRD3Q15059 726 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 FAM184BQ9ULE4 1060 aa21.21■□□□□ 0.99
COL27A1-207ENST00000494090 EXOC3O60645 756 aa21.2■□□□□ 0.99
COL27A1-207ENST00000494090 RPS8P62241 208 aaKnown RBP21.2■□□□□ 0.99
COL27A1-207ENST00000494090 ERCC6LQ2NKX8 1250 aa21.2■□□□□ 0.98
COL27A1-207ENST00000494090 INTS8Q75QN2 995 aaKnown RBP21.2■□□□□ 0.98
COL27A1-207ENST00000494090 CCDC125Q86Z20 511 aa21.2■□□□□ 0.98
COL27A1-207ENST00000494090 LRRC8AQ8IWT6 810 aa21.2■□□□□ 0.98
COL27A1-207ENST00000494090 FANCBQ8NB91 859 aa21.2■□□□□ 0.98
COL27A1-207ENST00000494090 OR8K1Q8NGG5 319 aa21.2■□□□□ 0.98
COL27A1-207ENST00000494090 COPRSQ9NQ92 184 aa21.2■□□□□ 0.98
COL27A1-207ENST00000494090 SLC5A4Q9NY91 659 aa21.2■□□□□ 0.98
COL27A1-207ENST00000494090 LACTBP83111 547 aaPredicted RBP21.2■□□□□ 0.98
COL27A1-207ENST00000494090 RPS6KA1Q15418 735 aa21.2■□□□□ 0.98
COL27A1-207ENST00000494090 NSMFQ6X4W1 530 aa21.2■□□□□ 0.98
COL27A1-207ENST00000494090 MAIP1Q8WWC4 291 aa21.2■□□□□ 0.98
COL27A1-207ENST00000494090 IFIH1Q9BYX4 1025 aaKnown RBP21.2■□□□□ 0.98
COL27A1-207ENST00000494090 OAS2P29728 719 aaKnown RBP21.2■□□□□ 0.98
COL27A1-207ENST00000494090 PPFIA1Q13136 1202 aa21.2■□□□□ 0.98
COL27A1-207ENST00000494090 MYCT1Q8N699 235 aa21.2■□□□□ 0.98
COL27A1-207ENST00000494090 KCNJ18B7U540 433 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 PDE6AP16499 860 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 KCNJ12Q14500 433 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 FAM47AQ5JRC9 791 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 GAS2L3Q86XJ1 694 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 MAPKAPK5Q8IW41 473 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 MKRN1Q9UHC7 482 aaKnown RBP21.19■□□□□ 0.98
COL27A1-207ENST00000494090 IRX3P78415 501 aaPredicted RBP21.19■□□□□ 0.98
COL27A1-207ENST00000494090 OTUD6AQ7L8S5 288 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 DAAM2Q86T65 1068 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 SAR1BQ9Y6B6 198 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 P4HA1P13674 534 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 CTTNBP2NLQ9P2B4 639 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 PDIA3P30101 505 aaKnown RBP21.19■□□□□ 0.98
COL27A1-207ENST00000494090 POTEDQ86YR6 584 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 AFAP1L2Q8N4X5 818 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 ZBTB38Q8NAP3 1195 aaPredicted RBP21.19■□□□□ 0.98
COL27A1-207ENST00000494090 TGFBRAP1Q8WUH2 860 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 TEKT1Q969V4 418 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 FGAP02671 866 aa21.19■□□□□ 0.98
COL27A1-207ENST00000494090 A0A1W2PQ27 194 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 A0A1W2PQ64 194 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 A0A1W2PQD8 194 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 ADD1P35611 737 aaKnown RBP21.18■□□□□ 0.98
COL27A1-207ENST00000494090 ZYXQ15942 572 aaKnown RBP21.18■□□□□ 0.98
COL27A1-207ENST00000494090 TAOK1Q7L7X3 1001 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 PCCAP05165 728 aaPredicted RBP21.18■□□□□ 0.98
COL27A1-207ENST00000494090 MTMR3Q13615 1198 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 MORC3Q14149 939 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 FAM98CQ17RN3 349 aaKnown RBP21.18■□□□□ 0.98
COL27A1-207ENST00000494090 RRAGAQ7L523 313 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 BLIDQ8IZY5 108 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 SMCO2A6NFE2 343 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 RASA3Q14644 834 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 GNPTABQ3T906 1256 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 NELFCDQ8IXH7 590 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 TBC1D7Q9P0N9 293 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 TTC37Q6PGP7 1564 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 MED23Q9ULK4 1368 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 FYB2Q5VWT5 728 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 KLHL7Q8IXQ5 586 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 NSMCE1Q8WV22 266 aa21.18■□□□□ 0.98
COL27A1-207ENST00000494090 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.18■□□□□ 0.981e-7■■□□□ 12.6
COL27A1-207ENST00000494090 TYW1BQ6NUM6 668 aa21.17■□□□□ 0.98
COL27A1-207ENST00000494090 DCUN1D2Q6PH85 259 aa21.17■□□□□ 0.98
COL27A1-207ENST00000494090 PPP2R2CQ9Y2T4 447 aa21.17■□□□□ 0.98
COL27A1-207ENST00000494090 KAT6BQ8WYB5 2073 aa21.17■□□□□ 0.98
COL27A1-207ENST00000494090 MBD5Q9P267 1494 aa21.17■□□□□ 0.98
COL27A1-207ENST00000494090 USP17L12C9JPN9 530 aa21.17■□□□□ 0.98
COL27A1-207ENST00000494090 USP17L21D6R901 530 aa21.17■□□□□ 0.98
COL27A1-207ENST00000494090 H7C1D1 291 aa21.17■□□□□ 0.98
COL27A1-207ENST00000494090 CRCPO75575 148 aa21.17■□□□□ 0.98
COL27A1-207ENST00000494090 CPXCR1Q8N123 301 aa21.17■□□□□ 0.98
COL27A1-207ENST00000494090 FAM207AQ9NSI2 230 aaPredicted RBP21.17■□□□□ 0.98
COL27A1-207ENST00000494090 SH3BP5O60239 455 aa21.17■□□□□ 0.98
COL27A1-207ENST00000494090 CFBP00751 764 aa21.17■□□□□ 0.98
COL27A1-207ENST00000494090 SCRN1Q12765 414 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms