RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 USP14P54578 494 aa10.26□□□□□ -0.77
LRCH3-219ENST00000494069 ANKRD45Q5TZF3 282 aa10.26□□□□□ -0.77
LRCH3-219ENST00000494069 TMEM179Q6ZVK1 233 aa10.26□□□□□ -0.77
LRCH3-219ENST00000494069 C16orf86Q6ZW13 317 aa10.26□□□□□ -0.77
LRCH3-219ENST00000494069 U2AF1L4Q8WU68 220 aaKnown RBP10.26□□□□□ -0.77
LRCH3-219ENST00000494069 TRIB2Q92519 343 aa10.26□□□□□ -0.77
LRCH3-219ENST00000494069 APPBP2Q92624 585 aa10.26□□□□□ -0.77
LRCH3-219ENST00000494069 DEFB118Q96PH6 123 aa10.26□□□□□ -0.77
LRCH3-219ENST00000494069 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.26□□□□□ -0.77
LRCH3-219ENST00000494069 EPB41L4AQ9HCS5 686 aaPredicted RBP10.26□□□□□ -0.77
LRCH3-219ENST00000494069 SWAP70Q9UH65 585 aa10.26□□□□□ -0.77
LRCH3-219ENST00000494069 SALL3Q9BXA9 1300 aa10.26□□□□□ -0.77
LRCH3-219ENST00000494069 PLXNB2O15031 1838 aa10.26□□□□□ -0.77
LRCH3-219ENST00000494069 MYH7P12883 1935 aa10.25□□□□□ -0.77
LRCH3-219ENST00000494069 SPDYE16A6NNV3 312 aaPredicted RBP10.25□□□□□ -0.77
LRCH3-219ENST00000494069 MINDY4BA8MYZ0 360 aa10.25□□□□□ -0.77
LRCH3-219ENST00000494069 GPAA1O43292 621 aa10.25□□□□□ -0.77
LRCH3-219ENST00000494069 SGPL1O95470 568 aa10.25□□□□□ -0.77
LRCH3-219ENST00000494069 CCL14Q16627 93 aa10.25□□□□□ -0.77
LRCH3-219ENST00000494069 GPR142Q7Z601 462 aa10.25□□□□□ -0.77
LRCH3-219ENST00000494069 UBE2Q1Q7Z7E8 422 aa10.25□□□□□ -0.77
LRCH3-219ENST00000494069 SPICE1Q8N0Z3 855 aa10.25□□□□□ -0.77
LRCH3-219ENST00000494069 GLRX3O76003 335 aaKnown RBP10.24□□□□□ -0.77
LRCH3-219ENST00000494069 TFRCP02786 760 aaKnown RBP10.24□□□□□ -0.77
LRCH3-219ENST00000494069 EEF2P13639 858 aaKnown RBP10.24□□□□□ -0.77
LRCH3-219ENST00000494069 MX1P20591 662 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 CLCN6P51797 869 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 ATP2B2Q01814 1243 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 ICA1Q05084 483 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 SBK1Q52WX2 424 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 MORN1Q5T089 497 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 PLEKHH3Q7Z736 793 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 NKX2-3Q8TAU0 364 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 USP6NLQ92738 828 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 DDRGK1Q96HY6 314 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 NUDT12Q9BQG2 462 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 TANGO6Q9C0B7 1094 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.24□□□□□ -0.77
LRCH3-219ENST00000494069 PAK6Q9NQU5 681 aaPredicted RBP10.24□□□□□ -0.77
LRCH3-219ENST00000494069 TMX2Q9Y320 296 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 RABGAP1Q9Y3P9 1069 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 TTC41PQ6P2S7 1318 aa10.24□□□□□ -0.77
LRCH3-219ENST00000494069 ERC2O15083 957 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 HMGCRP04035 888 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 ZFYP08048 801 aaPredicted RBP10.23□□□□□ -0.77
LRCH3-219ENST00000494069 RASA1P20936 1047 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 MAPK4P31152 587 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 HDAC1Q13547 482 aaPredicted RBP10.23□□□□□ -0.77
LRCH3-219ENST00000494069 COG2Q14746 738 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 WDR78Q5VTH9 848 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 LBX2Q6XYB7 198 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 CCDC129Q6ZRS4 1044 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 CCAR1Q8IX12 1150 aaKnown RBP10.23□□□□□ -0.77
LRCH3-219ENST00000494069 AMOTL1Q8IY63 956 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 IFNL3Q8IZI9 196 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 GTF3C2Q8WUA4 911 aaPredicted RBP10.23□□□□□ -0.77
LRCH3-219ENST00000494069 CCDC17Q96LX7 622 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 FSD1Q9BTV5 496 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 CRISPLD2Q9H0B8 497 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 VCPKMTQ9H867 229 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 ARHGEF10LQ9HCE6 1279 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 FLRT1Q9NZU1 646 aa10.23□□□□□ -0.77
LRCH3-219ENST00000494069 ARPP21Q9UBL0 812 aaPredicted RBP10.23□□□□□ -0.77
LRCH3-219ENST00000494069 PATL2C9JE40 543 aaKnown RBP10.22□□□□□ -0.77
LRCH3-219ENST00000494069 H0YGN5 161 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 FOXP2O15409 715 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 PRDM1O75626 825 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 FARP2O94887 1054 aaPredicted RBP10.22□□□□□ -0.77
LRCH3-219ENST00000494069 IGHDP01880 384 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 APPP05067 770 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 TDO2P48775 406 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 MAP2K5Q13163 448 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 ZMYM1Q5SVZ6 1142 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 GIMAP6Q6P9H5 292 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 EXOC6Q8TAG9 804 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 DIS3LQ8TF46 1054 aaKnown RBP10.22□□□□□ -0.77
LRCH3-219ENST00000494069 SOCS4Q8WXH5 440 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 DPF3Q92784 378 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 ATG4CQ96DT6 458 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 MOV10L1Q9BXT6 1211 aaKnown RBP10.22□□□□□ -0.77
LRCH3-219ENST00000494069 FBXO28Q9NVF7 368 aa10.22□□□□□ -0.77
LRCH3-219ENST00000494069 RAD21O60216 631 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 FLOT1O75955 427 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 SLC34A2O95436 690 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 XRCC5P13010 732 aaKnown RBP10.21□□□□□ -0.77
LRCH3-219ENST00000494069 ZKSCAN1P17029 563 aaPredicted RBP10.21□□□□□ -0.77
LRCH3-219ENST00000494069 PTPREP23469 700 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 CCND3P30281 292 aaPredicted RBP10.21□□□□□ -0.77
LRCH3-219ENST00000494069 RGS2P41220 211 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 PDE1AP54750 535 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 CACNB2Q08289 660 aaPredicted RBP10.21□□□□□ -0.77
LRCH3-219ENST00000494069 MAP3K21Q5TCX8 1036 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 B4GALNT3Q6L9W6 998 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 NPLOC4Q8TAT6 608 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 GCC1Q96CN9 775 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 PAWRQ96IZ0 340 aaKnown RBP10.21□□□□□ -0.77
LRCH3-219ENST00000494069 NUP88Q99567 741 aaPredicted RBP10.21□□□□□ -0.77
LRCH3-219ENST00000494069 LNPKQ9C0E8 428 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 KANSL2Q9H9L4 492 aa10.21□□□□□ -0.77
LRCH3-219ENST00000494069 MKNK2Q9HBH9 465 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms