RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 GSG1L2A8MUP6 293 aa16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 M0R2C6 588 aa16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 XRCC5P13010 732 aaKnown RBP16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 RGS2P41220 211 aa16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 CCL14Q16627 93 aa16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 WDR78Q5VTH9 848 aa16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 C16orf86Q6ZW13 317 aa16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 GPR142Q7Z601 462 aa16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 PLEKHH3Q7Z736 793 aa16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 CCDC17Q96LX7 622 aa16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 SH2D4AQ9H788 454 aa16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 ARHGEF10LQ9HCE6 1279 aa16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 IVNS1ABPQ9Y6Y0 642 aa16.1■□□□□ 0.17
CTDSP1-212ENST00000494067 H0YGN5 161 aa16.09■□□□□ 0.17
CTDSP1-212ENST00000494067 ZKSCAN1P17029 563 aaPredicted RBP16.09■□□□□ 0.17
CTDSP1-212ENST00000494067 LRRFIP1Q32MZ4 808 aaKnown RBP16.09■□□□□ 0.17
CTDSP1-212ENST00000494067 MORN1Q5T089 497 aa16.09■□□□□ 0.17
CTDSP1-212ENST00000494067 SEC62Q99442 399 aaKnown RBP16.09■□□□□ 0.17
CTDSP1-212ENST00000494067 CRISPLD2Q9H0B8 497 aa16.09■□□□□ 0.17
CTDSP1-212ENST00000494067 HOXC10Q9NYD6 342 aa16.09■□□□□ 0.17
CTDSP1-212ENST00000494067 EVI5O60447 810 aa16.08■□□□□ 0.16
CTDSP1-212ENST00000494067 MNX1P50219 401 aaPredicted RBP16.08■□□□□ 0.16
CTDSP1-212ENST00000494067 LBX2Q6XYB7 198 aa16.08■□□□□ 0.16
CTDSP1-212ENST00000494067 NECAB2Q7Z6G3 386 aa16.08■□□□□ 0.16
CTDSP1-212ENST00000494067 ANKLE1Q8NAG6 615 aa16.08■□□□□ 0.16
CTDSP1-212ENST00000494067 DIS3LQ8TF46 1054 aaKnown RBP16.08■□□□□ 0.16
CTDSP1-212ENST00000494067 ZNF236Q9UL36 1845 aa16.08■□□□□ 0.16
CTDSP1-212ENST00000494067 RNF113AO15541 343 aaKnown RBP16.07■□□□□ 0.16
CTDSP1-212ENST00000494067 COG2Q14746 738 aa16.07■□□□□ 0.16
CTDSP1-212ENST00000494067 MAP3K21Q5TCX8 1036 aa16.07■□□□□ 0.16
CTDSP1-212ENST00000494067 SPICE1Q8N0Z3 855 aa16.07■□□□□ 0.16
CTDSP1-212ENST00000494067 STK11IPQ8N1F8 1099 aa16.07■□□□□ 0.16
CTDSP1-212ENST00000494067 APPBP2Q92624 585 aa16.07■□□□□ 0.16
CTDSP1-212ENST00000494067 LPAR1Q92633 364 aa16.07■□□□□ 0.16
CTDSP1-212ENST00000494067 APBA2Q99767 749 aa16.07■□□□□ 0.16
CTDSP1-212ENST00000494067 TANGO6Q9C0B7 1094 aa16.07■□□□□ 0.16
CTDSP1-212ENST00000494067 FLRT1Q9NZU1 646 aa16.07■□□□□ 0.16
CTDSP1-212ENST00000494067 ZBTB47Q9UFB7 747 aaPredicted RBP16.07■□□□□ 0.16
CTDSP1-212ENST00000494067 COLQQ9Y215 455 aaPredicted RBP16.07■□□□□ 0.16
CTDSP1-212ENST00000494067 TMX2Q9Y320 296 aa16.07■□□□□ 0.16
CTDSP1-212ENST00000494067 ROBO3Q96MS0 1386 aa16.06■□□□□ 0.16
CTDSP1-212ENST00000494067 GPAA1O43292 621 aa16.06■□□□□ 0.16
CTDSP1-212ENST00000494067 ICA1Q05084 483 aa16.06■□□□□ 0.16
CTDSP1-212ENST00000494067 ARPP21Q9UBL0 812 aaPredicted RBP16.06■□□□□ 0.16
CTDSP1-212ENST00000494067 TTC41PQ6P2S7 1318 aa16.05■□□□□ 0.16
CTDSP1-212ENST00000494067 ERC2O15083 957 aa16.05■□□□□ 0.16
CTDSP1-212ENST00000494067 FOXP2O15409 715 aa16.05■□□□□ 0.16
CTDSP1-212ENST00000494067 EEF2P13639 858 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-212ENST00000494067 PRKAR2AP13861 404 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-212ENST00000494067 RASA1P20936 1047 aa16.05■□□□□ 0.16
CTDSP1-212ENST00000494067 CACNB2Q08289 660 aaPredicted RBP16.05■□□□□ 0.16
CTDSP1-212ENST00000494067 MAP2K5Q13163 448 aa16.05■□□□□ 0.16
CTDSP1-212ENST00000494067 SBK1Q52WX2 424 aa16.05■□□□□ 0.16
CTDSP1-212ENST00000494067 MFSD14CQ5VZR4 134 aa16.05■□□□□ 0.16
CTDSP1-212ENST00000494067 PAWRQ96IZ0 340 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-212ENST00000494067 VCPKMTQ9H867 229 aa16.05■□□□□ 0.16
CTDSP1-212ENST00000494067 MYH4Q9Y623 1939 aa16.05■□□□□ 0.16
CTDSP1-212ENST00000494067 SLC15A5A6NIM6 579 aa16.04■□□□□ 0.16
CTDSP1-212ENST00000494067 ZFYP08048 801 aaPredicted RBP16.04■□□□□ 0.16
CTDSP1-212ENST00000494067 PTPREP23469 700 aa16.04■□□□□ 0.16
CTDSP1-212ENST00000494067 CCND3P30281 292 aaPredicted RBP16.04■□□□□ 0.16
CTDSP1-212ENST00000494067 ATP2B2Q01814 1243 aa16.04■□□□□ 0.16
CTDSP1-212ENST00000494067 CHRDL2Q6WN34 429 aa16.04■□□□□ 0.16
CTDSP1-212ENST00000494067 MB21D1Q8N884 522 aa16.04■□□□□ 0.16
CTDSP1-212ENST00000494067 NPLOC4Q8TAT6 608 aa16.04■□□□□ 0.16
CTDSP1-212ENST00000494067 ATG4CQ96DT6 458 aa16.04■□□□□ 0.16
CTDSP1-212ENST00000494067 MOV10L1Q9BXT6 1211 aaKnown RBP16.04■□□□□ 0.16
CTDSP1-212ENST00000494067 NBPF3Q9H094 633 aa16.04■□□□□ 0.16
CTDSP1-212ENST00000494067 KANSL2Q9H9L4 492 aa16.04■□□□□ 0.16
CTDSP1-212ENST00000494067 FBXO28Q9NVF7 368 aa16.04■□□□□ 0.16
CTDSP1-212ENST00000494067 STRNO43815 780 aa16.03■□□□□ 0.16
CTDSP1-212ENST00000494067 IGHA2P01877 340 aa16.03■□□□□ 0.16
CTDSP1-212ENST00000494067 GNAT2P19087 354 aa16.03■□□□□ 0.16
CTDSP1-212ENST00000494067 MX1P20591 662 aa16.03■□□□□ 0.16
CTDSP1-212ENST00000494067 CCDC129Q6ZRS4 1044 aa16.03■□□□□ 0.16
CTDSP1-212ENST00000494067 MKNK2Q9HBH9 465 aa16.03■□□□□ 0.16
CTDSP1-212ENST00000494067 ZNF287Q9HBT7 754 aa16.03■□□□□ 0.16
CTDSP1-212ENST00000494067 SLC5A4Q9NY91 659 aa16.03■□□□□ 0.16
CTDSP1-212ENST00000494067 MINDY4BA8MYZ0 360 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 WDR46O15213 610 aaKnown RBP16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 RAD21O60216 631 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 FLOT1O75955 427 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 APPP05067 770 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 DSG3P32926 999 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 GRB14Q14449 540 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 PLS1Q14651 629 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 ZMYM1Q5SVZ6 1142 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 GIMAP6Q6P9H5 292 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 DPP9Q86TI2 863 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 C11orf49Q9H6J7 331 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 GOPCQ9HD26 462 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 OGDHLQ9ULD0 1010 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 TACC3Q9Y6A5 838 aa16.02■□□□□ 0.16
CTDSP1-212ENST00000494067 IGKV6D-41A0A0C4DH26 115 aa16.01■□□□□ 0.15
CTDSP1-212ENST00000494067 PRDM1O75626 825 aa16.01■□□□□ 0.15
CTDSP1-212ENST00000494067 HDAC1Q13547 482 aaPredicted RBP16.01■□□□□ 0.15
CTDSP1-212ENST00000494067 ANKRD45Q5TZF3 282 aa16.01■□□□□ 0.15
CTDSP1-212ENST00000494067 LHX8Q68G74 356 aa16.01■□□□□ 0.15
CTDSP1-212ENST00000494067 SAMD1Q6SPF0 538 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms