RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 RPAP3Q9H6T3 665 aaPredicted RBP19.21■□□□□ 0.67
SATB1-217ENST00000493952 VCPKMTQ9H867 229 aa19.21■□□□□ 0.67
SATB1-217ENST00000493952 INCENPQ9NQS7 918 aa19.21■□□□□ 0.67
SATB1-217ENST00000493952 MORF4L1Q9UBU8 362 aa19.21■□□□□ 0.67
SATB1-217ENST00000493952 TACC3Q9Y6A5 838 aa19.21■□□□□ 0.67
SATB1-217ENST00000493952 HTTP42858 3142 aa19.21■□□□□ 0.67
SATB1-217ENST00000493952 ZNFX1Q9P2E3 1918 aaKnown RBP19.2■□□□□ 0.66
SATB1-217ENST00000493952 IGKV6D-41A0A0C4DH26 115 aa19.2■□□□□ 0.66
SATB1-217ENST00000493952 NEFLP07196 543 aa19.2■□□□□ 0.66
SATB1-217ENST00000493952 FCGRTP55899 365 aa19.2■□□□□ 0.66
SATB1-217ENST00000493952 POTEEQ6S8J3 1075 aa19.2■□□□□ 0.66
SATB1-217ENST00000493952 TXNRD2Q9NNW7 524 aa19.2■□□□□ 0.66
SATB1-217ENST00000493952 PTCH2Q9Y6C5 1203 aa19.2■□□□□ 0.66
SATB1-217ENST00000493952 FAM47AQ5JRC9 791 aa19.19■□□□□ 0.66
SATB1-217ENST00000493952 SPICE1Q8N0Z3 855 aa19.19■□□□□ 0.66
SATB1-217ENST00000493952 LPAR1Q92633 364 aa19.19■□□□□ 0.66
SATB1-217ENST00000493952 CEP95Q96GE4 821 aa19.19■□□□□ 0.66
SATB1-217ENST00000493952 CCDC136Q96JN2 1154 aa19.19■□□□□ 0.66
SATB1-217ENST00000493952 RBPJLQ9UBG7 517 aa19.19■□□□□ 0.66
SATB1-217ENST00000493952 SRRDQ9UH36 339 aa19.19■□□□□ 0.66
SATB1-217ENST00000493952 MYPNQ86TC9 1320 aa19.19■□□□□ 0.66
SATB1-217ENST00000493952 TSPY3P0CV98 308 aa19.18■□□□□ 0.66
SATB1-217ENST00000493952 TSPY8P0CW00 308 aa19.18■□□□□ 0.66
SATB1-217ENST00000493952 HAND2P61296 217 aa19.18■□□□□ 0.66
SATB1-217ENST00000493952 TFAP4Q01664 338 aa19.18■□□□□ 0.66
SATB1-217ENST00000493952 NEDD1Q8NHV4 660 aa19.18■□□□□ 0.66
SATB1-217ENST00000493952 PAGR1Q9BTK6 254 aa19.18■□□□□ 0.66
SATB1-217ENST00000493952 TANGO6Q9C0B7 1094 aa19.18■□□□□ 0.66
SATB1-217ENST00000493952 NBPF3Q9H094 633 aa19.18■□□□□ 0.66
SATB1-217ENST00000493952 NYAP2Q9P242 653 aa19.18■□□□□ 0.66
SATB1-217ENST00000493952 TNPO2O14787 897 aaKnown RBP19.17■□□□□ 0.66
SATB1-217ENST00000493952 WDR46O15213 610 aaKnown RBP19.17■□□□□ 0.66
SATB1-217ENST00000493952 FGRP09769 529 aa19.17■□□□□ 0.66
SATB1-217ENST00000493952 CHMLP26374 656 aa19.17■□□□□ 0.66
SATB1-217ENST00000493952 HOXD10P28358 340 aa19.17■□□□□ 0.66
SATB1-217ENST00000493952 PRMT2P55345 433 aa19.17■□□□□ 0.66
SATB1-217ENST00000493952 PRKCZQ05513 592 aa19.17■□□□□ 0.66
SATB1-217ENST00000493952 GTF3C2Q8WUA4 911 aaPredicted RBP19.17■□□□□ 0.66
SATB1-217ENST00000493952 GOPCQ9HD26 462 aa19.17■□□□□ 0.66
SATB1-217ENST00000493952 MTMR4Q9NYA4 1195 aa19.17■□□□□ 0.66
SATB1-217ENST00000493952 SPDYE16A6NNV3 312 aaPredicted RBP19.16■□□□□ 0.66
SATB1-217ENST00000493952 ORC4O43929 436 aa19.16■□□□□ 0.66
SATB1-217ENST00000493952 CNMDO75829 334 aa19.16■□□□□ 0.66
SATB1-217ENST00000493952 CENPBP07199 599 aaPredicted RBP19.16■□□□□ 0.66
SATB1-217ENST00000493952 ERVK-9P63128 1117 aa19.16■□□□□ 0.66
SATB1-217ENST00000493952 ERVK-24P63145 666 aa19.16■□□□□ 0.66
SATB1-217ENST00000493952 LBX2Q6XYB7 198 aa19.16■□□□□ 0.66
SATB1-217ENST00000493952 TBC1D10CQ8IV04 446 aa19.16■□□□□ 0.66
SATB1-217ENST00000493952 GPRC5AQ8NFJ5 357 aa19.16■□□□□ 0.66
SATB1-217ENST00000493952 DSCC1Q9BVC3 393 aa19.16■□□□□ 0.66
SATB1-217ENST00000493952 CLIP2Q9UDT6 1046 aa19.16■□□□□ 0.66
SATB1-217ENST00000493952 GABRQQ9UN88 632 aa19.16■□□□□ 0.66
SATB1-217ENST00000493952 RAD50Q92878 1312 aa19.16■□□□□ 0.66
SATB1-217ENST00000493952 CENPFP49454 3210 aa19.15■□□□□ 0.66
SATB1-217ENST00000493952 TSPY2A6NKD2 308 aa19.15■□□□□ 0.66
SATB1-217ENST00000493952 RAD21O60216 631 aa19.15■□□□□ 0.66
SATB1-217ENST00000493952 RANBP6O60518 1105 aaKnown RBP19.15■□□□□ 0.66
SATB1-217ENST00000493952 TTLL1O95922 423 aa19.15■□□□□ 0.66
SATB1-217ENST00000493952 Q3C1V9 767 aa19.15■□□□□ 0.66
SATB1-217ENST00000493952 TOMM22Q9NS69 142 aa19.15■□□□□ 0.66
SATB1-217ENST00000493952 PLXNA1Q9UIW2 1896 aa19.15■□□□□ 0.66
SATB1-217ENST00000493952 ZNF236Q9UL36 1845 aa19.14■□□□□ 0.65
SATB1-217ENST00000493952 FLOT1O75955 427 aa19.14■□□□□ 0.65
SATB1-217ENST00000493952 COG2Q14746 738 aa19.14■□□□□ 0.65
SATB1-217ENST00000493952 SLC9C1Q4G0N8 1177 aa19.14■□□□□ 0.65
SATB1-217ENST00000493952 RRP12Q5JTH9 1297 aaKnown RBP19.14■□□□□ 0.65
SATB1-217ENST00000493952 LRRC47Q8N1G4 583 aaKnown RBP19.14■□□□□ 0.65
SATB1-217ENST00000493952 RUFY2Q8WXA3 655 aa19.14■□□□□ 0.65
SATB1-217ENST00000493952 MKL1Q969V6 931 aa19.14■□□□□ 0.65
SATB1-217ENST00000493952 COA7Q96BR5 231 aa19.14■□□□□ 0.65
SATB1-217ENST00000493952 ARMC5Q96C12 935 aa19.14■□□□□ 0.65
SATB1-217ENST00000493952 PORCNQ9H237 461 aa19.14■□□□□ 0.65
SATB1-217ENST00000493952 IL17RBQ9NRM6 502 aa19.14■□□□□ 0.65
SATB1-217ENST00000493952 BTBD7Q9P203 1132 aa19.14■□□□□ 0.65
SATB1-217ENST00000493952 RABGAP1Q9Y3P9 1069 aa19.14■□□□□ 0.65
SATB1-217ENST00000493952 KIAA0100Q14667 2235 aaKnown RBP19.13■□□□□ 0.65
SATB1-217ENST00000493952 F5H6K3 240 aa19.13■□□□□ 0.65
SATB1-217ENST00000493952 NMT2O60551 498 aa19.13■□□□□ 0.65
SATB1-217ENST00000493952 NDUFB10O96000 172 aa19.13■□□□□ 0.65
SATB1-217ENST00000493952 FLT3LGP49771 235 aa19.13■□□□□ 0.65
SATB1-217ENST00000493952 SOX10P56693 466 aa19.13■□□□□ 0.65
SATB1-217ENST00000493952 KLRC3Q07444 240 aa19.13■□□□□ 0.65
SATB1-217ENST00000493952 FAM83BQ5T0W9 1011 aa19.13■□□□□ 0.65
SATB1-217ENST00000493952 AKNAD1Q5T1N1 836 aa19.13■□□□□ 0.65
SATB1-217ENST00000493952 RAET1EQ8TD07 263 aa19.13■□□□□ 0.65
SATB1-217ENST00000493952 SH3TC2Q8TF17 1288 aa19.13■□□□□ 0.65
SATB1-217ENST00000493952 STAG1Q8WVM7 1258 aa19.13■□□□□ 0.65
SATB1-217ENST00000493952 NUP88Q99567 741 aaPredicted RBP19.13■□□□□ 0.65
SATB1-217ENST00000493952 HOXC10Q9NYD6 342 aa19.13■□□□□ 0.65
SATB1-217ENST00000493952 NEDD4P46934 1319 aa19.12■□□□□ 0.65
SATB1-217ENST00000493952 ZNF213O14771 459 aa19.12■□□□□ 0.65
SATB1-217ENST00000493952 DSG3P32926 999 aa19.12■□□□□ 0.65
SATB1-217ENST00000493952 MFSD6Q6ZSS7 791 aa19.12■□□□□ 0.65
SATB1-217ENST00000493952 NKX2-3Q8TAU0 364 aa19.12■□□□□ 0.65
SATB1-217ENST00000493952 ATG4CQ96DT6 458 aa19.12■□□□□ 0.65
SATB1-217ENST00000493952 ZNF333Q96JL9 665 aa19.12■□□□□ 0.65
SATB1-217ENST00000493952 FBXO28Q9NVF7 368 aa19.12■□□□□ 0.65
SATB1-217ENST00000493952 SYNPO2Q9UMS6 1093 aa19.12■□□□□ 0.65
SATB1-217ENST00000493952 SGSM2O43147 1006 aa19.11■□□□□ 0.65
SATB1-217ENST00000493952 PCP11498 1178 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms