RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 DPCR1Q3MIW9 517 aa15.77■□□□□ 0.12
VCP-207ENST00000493886 ISM2Q6H9L7 571 aa15.77■□□□□ 0.12
VCP-207ENST00000493886 TMC4Q7Z404 712 aa15.77■□□□□ 0.12
VCP-207ENST00000493886 MAPKAPK5Q8IW41 473 aa15.77■□□□□ 0.12
VCP-207ENST00000493886 IL17RBQ9NRM6 502 aa15.77■□□□□ 0.12
VCP-207ENST00000493886 GPR75-ASB3A0A0A6YYF3 556 aa15.77■□□□□ 0.11
VCP-207ENST00000493886 PPEF1O14829 653 aaPredicted RBP15.77■□□□□ 0.11
VCP-207ENST00000493886 ATP2B1P20020 1258 aa15.77■□□□□ 0.11
VCP-207ENST00000493886 PTPREP23469 700 aa15.77■□□□□ 0.11
VCP-207ENST00000493886 DGKHQ86XP1 1220 aa15.77■□□□□ 0.11
VCP-207ENST00000493886 SP8Q8IXZ3 490 aa15.77■□□□□ 0.11
VCP-207ENST00000493886 KAT14Q9H8E8 782 aa15.77■□□□□ 0.11
VCP-207ENST00000493886 FBXO2Q9UK22 296 aaPredicted RBP15.77■□□□□ 0.11
VCP-207ENST00000493886 KCNH3Q9ULD8 1083 aa15.77■□□□□ 0.11
VCP-207ENST00000493886 NLRP12P59046 1061 aa15.76■□□□□ 0.11
VCP-207ENST00000493886 TBC1D22AQ8WUA7 517 aa15.76■□□□□ 0.11
VCP-207ENST00000493886 SAP30BPQ9UHR5 308 aaKnown RBP15.76■□□□□ 0.11
VCP-207ENST00000493886 CEP131Q9UPN4 1083 aa15.76■□□□□ 0.11
VCP-207ENST00000493886 LRRC37AA6NMS7 1700 aa15.76■□□□□ 0.11
VCP-207ENST00000493886 KIF5BP33176 963 aa15.76■□□□□ 0.11
VCP-207ENST00000493886 PLCD1P51178 756 aa15.76■□□□□ 0.11
VCP-207ENST00000493886 LTBP1Q14766 1721 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 FAM205CA6NFA0 338 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 GRIN1Q05586 938 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 SPECC1Q5M775 1068 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 NLGN1Q8N2Q7 840 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 SLC44A5Q8NCS7 719 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 ANKS1AQ92625 1134 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 BRMS1Q9HCU9 246 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.75■□□□□ 0.114e-6■■■□□ 16
VCP-207ENST00000493886 V9GYY5 206 aaPredicted RBP15.75■□□□□ 0.11
VCP-207ENST00000493886 BAZ2BQ9UIF8 2168 aaKnown RBP15.75■□□□□ 0.11
VCP-207ENST00000493886 ANKRD31Q8N7Z5 1873 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 PLCG2P16885 1265 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 CCDC178Q5BJE1 867 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 EARS2Q5JPH6 523 aaKnown RBP15.75■□□□□ 0.11
VCP-207ENST00000493886 COL23A1Q86Y22 540 aaPredicted RBP15.75■□□□□ 0.11
VCP-207ENST00000493886 LRRC8AQ8IWT6 810 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 TEX11Q8IYF3 940 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 ZNF444Q8N0Y2 327 aaPredicted RBP15.75■□□□□ 0.11
VCP-207ENST00000493886 FAM163AQ96GL9 167 aaPredicted RBP15.75■□□□□ 0.11
VCP-207ENST00000493886 BPIFA3Q9BQP9 254 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 TUBE1Q9UJT0 475 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 CDK5RAP2Q96SN8 1893 aa15.75■□□□□ 0.11
VCP-207ENST00000493886 KIF20AO95235 890 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 TSPY3P0CV98 308 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 TSPY8P0CW00 308 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 CDC25BP30305 580 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 PSEN1P49768 467 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 NPY5RQ15761 445 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 LONRF3Q496Y0 759 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 KRBA2Q6ZNG9 492 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 SLF2Q8IX21 1173 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 PNMA1Q8ND90 353 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 ATP6V0A2Q9Y487 856 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 SRPRBQ9Y5M8 271 aaKnown RBP15.74■□□□□ 0.11
VCP-207ENST00000493886 FAM205AQ6ZU69 1335 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 USP17L3A6NCW0 530 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 USP17L4A6NCW7 530 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 TRIM75PA6NK02 468 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 PLSCR1O15162 318 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 SKILP12757 684 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 SCG2P13521 617 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 USP17L1Q7RTZ2 530 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 ZNF579Q8NAF0 562 aaKnown RBP15.74■□□□□ 0.11
VCP-207ENST00000493886 CNNM3Q8NE01 707 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 AKT1S1Q96B36 256 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 TCP11L1Q9NUJ3 509 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 MMP14P50281 582 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 NCBP1Q09161 790 aaKnown RBP15.74■□□□□ 0.11
VCP-207ENST00000493886 PNOCQ13519 176 aa15.74■□□□□ 0.11
VCP-207ENST00000493886 GAKO14976 1311 aa15.73■□□□□ 0.11
VCP-207ENST00000493886 RIMBP2O15034 1052 aa15.73■□□□□ 0.11
VCP-207ENST00000493886 RASA1P20936 1047 aa15.73■□□□□ 0.11
VCP-207ENST00000493886 RHBDL3P58872 404 aa15.73■□□□□ 0.11
VCP-207ENST00000493886 PFKFB3Q16875 520 aaPredicted RBP15.73■□□□□ 0.11
VCP-207ENST00000493886 METTL16Q86W50 562 aaKnown RBP15.73■□□□□ 0.11
VCP-207ENST00000493886 TNFRSF25Q93038 417 aa15.73■□□□□ 0.11
VCP-207ENST00000493886 MRFAP1L1Q96HT8 127 aa15.73■□□□□ 0.11
VCP-207ENST00000493886 APBA3O96018 575 aa15.73■□□□□ 0.11
VCP-207ENST00000493886 SRGNP10124 158 aa15.73■□□□□ 0.11
VCP-207ENST00000493886 GTF2IP78347 998 aa15.73■□□□□ 0.11
VCP-207ENST00000493886 ZNF287Q9HBT7 754 aa15.73■□□□□ 0.11
VCP-207ENST00000493886 MORC2Q9Y6X9 1032 aaPredicted RBP15.73■□□□□ 0.11
VCP-207ENST00000493886 FLT1P17948 1338 aa15.73■□□□□ 0.11
VCP-207ENST00000493886 CCDC112Q8NEF3 446 aa15.72■□□□□ 0.11
VCP-207ENST00000493886 COA1Q9GZY4 146 aa15.72■□□□□ 0.11
VCP-207ENST00000493886 SMC2O95347 1197 aa15.72■□□□□ 0.11
VCP-207ENST00000493886 VEGFAP15692 232 aaPredicted RBP15.72■□□□□ 0.11
VCP-207ENST00000493886 NPR1P16066 1061 aa15.72■□□□□ 0.11
VCP-207ENST00000493886 NLRP5P59047 1200 aa15.72■□□□□ 0.11
VCP-207ENST00000493886 GRM4Q14833 912 aa15.72■□□□□ 0.11
VCP-207ENST00000493886 ELOA2Q8IYF1 753 aaPredicted RBP15.72■□□□□ 0.11
VCP-207ENST00000493886 NRXN2Q9P2S2 1712 aa15.72■□□□□ 0.11
VCP-207ENST00000493886 CDK8P49336 464 aa15.71■□□□□ 0.11
VCP-207ENST00000493886 NOM1Q5C9Z4 860 aaKnown RBP15.71■□□□□ 0.11
VCP-207ENST00000493886 CEP135Q66GS9 1140 aa15.71■□□□□ 0.11
VCP-207ENST00000493886 C16orf86Q6ZW13 317 aa15.71■□□□□ 0.11
VCP-207ENST00000493886 STAG2Q8N3U4 1231 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms